RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 CAPN10Q9HC96 672 aa12.14□□□□□ -0.47
CLN8-207ENST00000524258 VPS45Q9NRW7 570 aa12.14□□□□□ -0.47
CLN8-207ENST00000524258 DTLQ9NZJ0 730 aa12.14□□□□□ -0.47
CLN8-207ENST00000524258 EVLQ9UI08 416 aaPredicted RBP12.14□□□□□ -0.47
CLN8-207ENST00000524258 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.14□□□□□ -0.47
CLN8-207ENST00000524258 PI4KAP42356 2102 aa12.13□□□□□ -0.47
CLN8-207ENST00000524258 C1QTNF3-AMACRE9PGA6 284 aa12.13□□□□□ -0.47
CLN8-207ENST00000524258 DFFAO00273 331 aa12.13□□□□□ -0.47
CLN8-207ENST00000524258 PSTPIP1O43586 416 aa12.13□□□□□ -0.47
CLN8-207ENST00000524258 GDF9O60383 454 aa12.13□□□□□ -0.47
CLN8-207ENST00000524258 NDUFS2O75306 463 aa12.13□□□□□ -0.47
CLN8-207ENST00000524258 GJB3O75712 270 aa12.13□□□□□ -0.47
CLN8-207ENST00000524258 CR2P20023 1033 aa12.13□□□□□ -0.47
CLN8-207ENST00000524258 ITGB7P26010 798 aa12.13□□□□□ -0.47
CLN8-207ENST00000524258 DNA2P51530 1060 aa12.13□□□□□ -0.47
CLN8-207ENST00000524258 CCR5P51681 352 aa12.13□□□□□ -0.47
CLN8-207ENST00000524258 SNRPD1P62314 119 aaKnown RBP12.13□□□□□ -0.47
CLN8-207ENST00000524258 PPP2CBP62714 309 aa12.13□□□□□ -0.47
CLN8-207ENST00000524258 PPP2CAP67775 309 aa12.13□□□□□ -0.47
CLN8-207ENST00000524258 IRX4P78413 519 aa12.13□□□□□ -0.47
CLN8-207ENST00000524258 BNC1Q01954 994 aa12.13□□□□□ -0.47
CLN8-207ENST00000524258 NSUN2Q08J23 767 aaKnown RBP eCLIP12.13□□□□□ -0.47
CLN8-207ENST00000524258 RFTN1Q14699 578 aaPredicted RBP12.13□□□□□ -0.47
CLN8-207ENST00000524258 KIAA0895LQ68EN5 471 aa12.13□□□□□ -0.47
CLN8-207ENST00000524258 SLC23A3Q6PIS1 610 aa12.13□□□□□ -0.47
CLN8-207ENST00000524258 PRR23CQ6ZRP0 262 aa12.13□□□□□ -0.47
CLN8-207ENST00000524258 PARS2Q7L3T8 475 aaKnown RBP12.13□□□□□ -0.47
CLN8-207ENST00000524258 LRRC49Q8IUZ0 686 aa12.13□□□□□ -0.47
CLN8-207ENST00000524258 MAP7D3Q8IWC1 876 aa12.13□□□□□ -0.47
CLN8-207ENST00000524258 KATNAL2Q8IYT4 538 aa12.13□□□□□ -0.47
CLN8-207ENST00000524258 TEX26Q8N6G2 289 aa12.13□□□□□ -0.47
CLN8-207ENST00000524258 GPR161Q8N6U8 529 aaKnown RBP12.13□□□□□ -0.47
CLN8-207ENST00000524258 OR2T34Q8NGX1 318 aa12.13□□□□□ -0.47
CLN8-207ENST00000524258 GRIN3AQ8TCU5 1115 aa12.13□□□□□ -0.47
CLN8-207ENST00000524258 MAML1Q92585 1016 aa12.13□□□□□ -0.47
CLN8-207ENST00000524258 FATE1Q969F0 183 aa12.13□□□□□ -0.47
CLN8-207ENST00000524258 RNF25Q96BH1 459 aaPredicted RBP12.13□□□□□ -0.47
CLN8-207ENST00000524258 LRIG1Q96JA1 1093 aa12.13□□□□□ -0.47
CLN8-207ENST00000524258 CCDC114Q96M63 670 aa12.13□□□□□ -0.47
CLN8-207ENST00000524258 PSKH2Q96QS6 385 aa12.13□□□□□ -0.47
CLN8-207ENST00000524258 OMDQ99983 421 aa12.13□□□□□ -0.47
CLN8-207ENST00000524258 HERPUD2Q9BSE4 406 aa12.13□□□□□ -0.47
CLN8-207ENST00000524258 CPEB1Q9BZB8 566 aaKnown RBP12.13□□□□□ -0.47
CLN8-207ENST00000524258 KDM4CQ9H3R0 1056 aa12.13□□□□□ -0.47
CLN8-207ENST00000524258 LUC7LQ9NQ29 371 aaKnown RBP12.13□□□□□ -0.47
CLN8-207ENST00000524258 NCKAP1Q9Y2A7 1128 aa12.13□□□□□ -0.47
CLN8-207ENST00000524258 FARP1Q9Y4F1 1045 aaPredicted RBP12.13□□□□□ -0.47
CLN8-207ENST00000524258 ATXN2Q99700 1313 aaKnown RBP12.12□□□□□ -0.47
CLN8-207ENST00000524258 TSPAN11A1L157 253 aa12.12□□□□□ -0.47
CLN8-207ENST00000524258 LRRD1A4D1F6 860 aa12.12□□□□□ -0.47
CLN8-207ENST00000524258 KPNA3O00505 521 aaPredicted RBP12.12□□□□□ -0.47
CLN8-207ENST00000524258 WNT9AO14904 365 aa12.12□□□□□ -0.47
CLN8-207ENST00000524258 AREL1O15033 823 aa12.12□□□□□ -0.47
CLN8-207ENST00000524258 SPOPO43791 374 aa12.12□□□□□ -0.47
CLN8-207ENST00000524258 MAP3K6O95382 1288 aa12.12□□□□□ -0.47
CLN8-207ENST00000524258 SERPINB6P35237 376 aa12.12□□□□□ -0.47
CLN8-207ENST00000524258 GARSP41250 739 aaKnown RBP12.12□□□□□ -0.47
CLN8-207ENST00000524258 ABL2P42684 1182 aa12.12□□□□□ -0.47
CLN8-207ENST00000524258 RHOAP61586 193 aa12.12□□□□□ -0.47
CLN8-207ENST00000524258 SFSWAPQ12872 951 aaKnown RBP12.12□□□□□ -0.47
CLN8-207ENST00000524258 TMCO4Q5TGY1 634 aa12.12□□□□□ -0.47
CLN8-207ENST00000524258 ERN2Q76MJ5 926 aaKnown RBP12.12□□□□□ -0.47
CLN8-207ENST00000524258 NT5DC3Q86UY8 548 aa12.12□□□□□ -0.47
CLN8-207ENST00000524258 ZSWIM9Q86XI8 627 aa12.12□□□□□ -0.47
CLN8-207ENST00000524258 ZNF354CQ86Y25 554 aa12.12□□□□□ -0.47
CLN8-207ENST00000524258 OR14C36Q8NHC7 312 aa12.12□□□□□ -0.47
CLN8-207ENST00000524258 ALG3Q92685 438 aa12.12□□□□□ -0.47
CLN8-207ENST00000524258 EXOC2Q96KP1 924 aa12.12□□□□□ -0.47
CLN8-207ENST00000524258 CALR3Q96L12 384 aaKnown RBP12.12□□□□□ -0.47
CLN8-207ENST00000524258 GDAP1L1Q96MZ0 367 aa12.12□□□□□ -0.47
CLN8-207ENST00000524258 OLFM3Q96PB7 478 aa12.12□□□□□ -0.47
CLN8-207ENST00000524258 ZDHHC6Q9H6R6 413 aa12.12□□□□□ -0.47
CLN8-207ENST00000524258 DDX56Q9NY93 547 aaKnown RBP12.12□□□□□ -0.47
CLN8-207ENST00000524258 EIF2B4Q9UI10 523 aaKnown RBP12.12□□□□□ -0.47
CLN8-207ENST00000524258 ZFR2Q9UPR6 939 aaKnown RBP12.12□□□□□ -0.47
CLN8-207ENST00000524258 PCDHA3Q9Y5H8 950 aa12.12□□□□□ -0.47
CLN8-207ENST00000524258 FADS3Q9Y5Q0 445 aa12.12□□□□□ -0.47
CLN8-207ENST00000524258 CEP192Q8TEP8 1941 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 DNAH14Q0VDD8 3507 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 PCDH15Q96QU1 1955 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 hCG_1818297A0A087WSY0 165 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 A0A1W2PPC4 97 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 LNP1A1A4G5 178 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 GOLGA6L3A6NEY3 463 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 C16orf96A6NNT2 1141 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 KRIT1O00522 736 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 TRAFD1O14545 582 aaPredicted RBP12.11□□□□□ -0.47
CLN8-207ENST00000524258 CDX4O14627 284 aaPredicted RBP12.11□□□□□ -0.47
CLN8-207ENST00000524258 TM4SF5O14894 197 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 ARHGAP6O43182 974 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 AP1G1O43747 822 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 PALMO75781 387 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 KRT1P04264 644 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 UGT2B4P06133 528 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 SERPINF2P08697 491 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 ADRB3P13945 408 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 TIMP2P16035 220 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 CTNNA2P26232 953 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 CD27P26842 260 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 CTNNA1P35221 906 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms