RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	MFSD3	Q96ES6	412 aa		10.91	□□□□□ -0.66
SPIDR-222	ENST00000524006	TSPAN17	Q96FV3	270 aa		10.91	□□□□□ -0.66
SPIDR-222	ENST00000524006	IGSF21	Q96ID5	467 aa		10.91	□□□□□ -0.66
SPIDR-222	ENST00000524006	RILP	Q96NA2	401 aa		10.91	□□□□□ -0.66
SPIDR-222	ENST00000524006	FCRL3	Q96P31	734 aa	Predicted RBP	10.91	□□□□□ -0.66
SPIDR-222	ENST00000524006	MECR	Q9BV79	373 aa		10.91	□□□□□ -0.66
SPIDR-222	ENST00000524006	HERC2P3	Q9BVR0	1158 aa		10.91	□□□□□ -0.66
SPIDR-222	ENST00000524006	KIFC1	Q9BW19	673 aa		10.91	□□□□□ -0.66
SPIDR-222	ENST00000524006	CINP	Q9BW66	212 aa	Predicted RBP	10.91	□□□□□ -0.66
SPIDR-222	ENST00000524006	TTLL2	Q9BWV7	592 aa		10.91	□□□□□ -0.66
SPIDR-222	ENST00000524006	POLR1E	Q9GZS1	481 aa	Known RBP	10.91	□□□□□ -0.66
SPIDR-222	ENST00000524006	RHOJ	Q9H4E5	214 aa		10.91	□□□□□ -0.66
SPIDR-222	ENST00000524006	RETREG1	Q9H6L5	497 aa		10.91	□□□□□ -0.66
SPIDR-222	ENST00000524006	CCSER2	Q9H7U1	834 aa		10.91	□□□□□ -0.66
SPIDR-222	ENST00000524006	CYP4F11	Q9HBI6	524 aa		10.91	□□□□□ -0.66
SPIDR-222	ENST00000524006	CHRAC1	Q9NRG0	131 aa		10.91	□□□□□ -0.66
SPIDR-222	ENST00000524006	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	10.91	□□□□□ -0.66
SPIDR-222	ENST00000524006	IL1RAPL1	Q9NZN1	696 aa		10.91	□□□□□ -0.66
SPIDR-222	ENST00000524006	AFF4	Q9UHB7	1163 aa	Known RBP	10.91	□□□□□ -0.66
SPIDR-222	ENST00000524006	SLC39A10	Q9ULF5	831 aa		10.91	□□□□□ -0.66
SPIDR-222	ENST00000524006	PSAT1	Q9Y617	370 aa		10.91	□□□□□ -0.66
SPIDR-222	ENST00000524006	MRPL42	Q9Y6G3	142 aa	Known RBP	10.91	□□□□□ -0.66
SPIDR-222	ENST00000524006	PTPRS	Q13332	1948 aa		10.91	□□□□□ -0.66
SPIDR-222	ENST00000524006	MTCL1	Q9Y4B5	1905 aa	Known RBP	10.91	□□□□□ -0.66
SPIDR-222	ENST00000524006	IGLV3-10	A0A075B6K4	115 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	ACSL4	O60488	711 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	PLIN3	O60664	434 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	HSPA4L	O95757	839 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	ALDOA	P04075	364 aa	Known RBP	10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	RHOC	P08134	193 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	IRF1	P10914	325 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	MYL2	P10916	166 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	CPA3	P15088	417 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	EZR	P15311	586 aa	Known RBP	10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	NQO1	P15559	274 aa	Known RBP	10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	ATF6	P18850	670 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	PPM1A	P35813	382 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	PPP3CC	P48454	512 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	CD151	P48509	253 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	POLD2	P49005	469 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	EPHB3	P54753	998 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	PRAME	P78395	509 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	BNIP1	Q12981	228 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	BTG3	Q14201	252 aa	Predicted RBP	10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	LBR	Q14739	615 aa	Known RBP	10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	ALF	Q53S48	1182 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	SPDYA	Q5MJ70	313 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	TEDDM1	Q5T9Z0	273 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	IL31	Q6EBC2	164 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	ZNF470	Q6ECI4	717 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	KIAA0930	Q6ICG6	404 aa	Predicted RBP	10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	CYB5D1	Q6P9G0	228 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	ITIH5	Q86UX2	942 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	CIR1	Q86X95	450 aa	Predicted RBP	10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	HERC6	Q8IVU3	1022 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	ARID3B	Q8IVW6	561 aa	Predicted RBP	10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	FITM2	Q8N6M3	262 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	CNTD1	Q8N815	330 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	RFWD2	Q8NHY2	731 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	RDH11	Q8TC12	318 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	SCG3	Q8WXD2	468 aa	Known RBP	10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	ELMO2	Q96JJ3	720 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	ZNF599	Q96NL3	588 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	TOX2	Q96NM4	488 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	GCNA	Q96QF7	691 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	KLC4	Q9NSK0	619 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	THAP1	Q9NVV9	213 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	KCNK4	Q9NYG8	393 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	SIRPG	Q9P1W8	387 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	HSFX1	Q9UBD0	423 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	STK38L	Q9Y2H1	464 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006	YIPF1	Q9Y548	306 aa		10.9	□□□□□ -0.66
SPIDR-222	ENST00000524006		A0A087X1B8	175 aa		10.89	□□□□□ -0.67
SPIDR-222	ENST00000524006	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	10.89	□□□□□ -0.67
SPIDR-222	ENST00000524006	ZCWPW2	A0A1B0GU75	182 aa		10.89	□□□□□ -0.67
SPIDR-222	ENST00000524006	ABHD14A-ACY1	A0A1B0GW23	586 aa		10.89	□□□□□ -0.67
SPIDR-222	ENST00000524006	CACNG3	O60359	315 aa		10.89	□□□□□ -0.67
SPIDR-222	ENST00000524006	CCDC22	O60826	627 aa		10.89	□□□□□ -0.67
SPIDR-222	ENST00000524006	CNTN5	O94779	1100 aa		10.89	□□□□□ -0.67
SPIDR-222	ENST00000524006	UNC5C	O95185	931 aa		10.89	□□□□□ -0.67
SPIDR-222	ENST00000524006	VAPB	O95292	243 aa		10.89	□□□□□ -0.67
SPIDR-222	ENST00000524006	TBX18	O95935	607 aa		10.89	□□□□□ -0.67
SPIDR-222	ENST00000524006	PROC	P04070	461 aa		10.89	□□□□□ -0.67
SPIDR-222	ENST00000524006	SOD2	P04179	222 aa		10.89	□□□□□ -0.67
SPIDR-222	ENST00000524006	FGF1	P05230	155 aa		10.89	□□□□□ -0.67
SPIDR-222	ENST00000524006	MBL2	P11226	248 aa	Predicted RBP	10.89	□□□□□ -0.67
SPIDR-222	ENST00000524006	RPL17	P18621	184 aa	Known RBP	10.89	□□□□□ -0.67
SPIDR-222	ENST00000524006	TARS	P26639	723 aa	Known RBP	10.89	□□□□□ -0.67
SPIDR-222	ENST00000524006	SLC1A6	P48664	564 aa		10.89	□□□□□ -0.67
SPIDR-222	ENST00000524006	PRKAA2	P54646	552 aa		10.89	□□□□□ -0.67
SPIDR-222	ENST00000524006	CDH4	P55283	916 aa		10.89	□□□□□ -0.67
SPIDR-222	ENST00000524006	DSC2	Q02487	901 aa		10.89	□□□□□ -0.67
SPIDR-222	ENST00000524006	CDK18	Q07002	472 aa		10.89	□□□□□ -0.67
SPIDR-222	ENST00000524006	ZNF177	Q13360	481 aa	Predicted RBP	10.89	□□□□□ -0.67
SPIDR-222	ENST00000524006	SERINC3	Q13530	473 aa		10.89	□□□□□ -0.67
SPIDR-222	ENST00000524006	SLC12A1	Q13621	1099 aa		10.89	□□□□□ -0.67
SPIDR-222	ENST00000524006	ZRSR2	Q15696	482 aa	Known RBP	10.89	□□□□□ -0.67
SPIDR-222	ENST00000524006	TBCC	Q15814	346 aa		10.89	□□□□□ -0.67
SPIDR-222	ENST00000524006	TSNAXIP1	Q2TAA8	658 aa		10.89	□□□□□ -0.67
SPIDR-222	ENST00000524006	GALNTL6	Q49A17	601 aa		10.89	□□□□□ -0.67

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