RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 SPATS2Q86XZ4 545 aaKnown RBP9.02□□□□□ -0.97
CTNNA1-240ENST00000523912 RTL3Q8N8U3 475 aaKnown RBP9.02□□□□□ -0.97
CTNNA1-240ENST00000523912 LSM14AQ8ND56 463 aaKnown RBP9.02□□□□□ -0.97
CTNNA1-240ENST00000523912 OR2AP1Q8NGE2 309 aa9.02□□□□□ -0.97
CTNNA1-240ENST00000523912 JOSD2Q8TAC2 188 aa9.02□□□□□ -0.97
CTNNA1-240ENST00000523912 CENPIQ92674 756 aaPredicted RBP9.02□□□□□ -0.97
CTNNA1-240ENST00000523912 KLK6Q92876 244 aa9.02□□□□□ -0.97
CTNNA1-240ENST00000523912 ARHGEF2Q92974 986 aaKnown RBP9.02□□□□□ -0.97
CTNNA1-240ENST00000523912 IFT43Q96FT9 208 aa9.02□□□□□ -0.97
CTNNA1-240ENST00000523912 MCEEQ96PE7 176 aa9.02□□□□□ -0.97
CTNNA1-240ENST00000523912 AGPAT1Q99943 283 aa9.02□□□□□ -0.97
CTNNA1-240ENST00000523912 NCAPGQ9BPX3 1015 aa9.02□□□□□ -0.97
CTNNA1-240ENST00000523912 CNPY3Q9BT09 278 aa9.02□□□□□ -0.97
CTNNA1-240ENST00000523912 C1QTNF7Q9BXJ2 289 aa9.02□□□□□ -0.97
CTNNA1-240ENST00000523912 IPO11Q9UI26 975 aaKnown RBP9.02□□□□□ -0.97
CTNNA1-240ENST00000523912 DNAI1Q9UI46 699 aa9.02□□□□□ -0.97
CTNNA1-240ENST00000523912 CA5BQ9Y2D0 317 aa9.02□□□□□ -0.97
CTNNA1-240ENST00000523912 FAM149AA5PLN7 773 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 TRABD2BA6NFA1 517 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 EIF4E1BA6NMX2 242 aaKnown RBP9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 C16orf96A6NNT2 1141 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 SMTNL1A8MU46 457 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 EIF3CLB5ME19 914 aaKnown RBP9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 KRIT1O00522 736 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 RIOK3O14730 519 aaKnown RBP9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 FPGTO14772 594 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 KDELR3O43731 214 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 SDC3O75056 442 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 GJB6O95452 261 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 POP4O95707 220 aaKnown RBP9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 UGT2B4P06133 528 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 XPAP23025 273 aaPredicted RBP9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 RFC1P35251 1148 aaPredicted RBP9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 RHOAP61586 193 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 E2F1Q01094 437 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 TYRO3Q06418 890 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 PTP4A2Q12974 167 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 DNAJC3Q13217 504 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 TMEM259Q4ZIN3 620 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 CFAP58Q5T655 872 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 HES3Q5TGS1 186 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 SEL1L3Q68CR1 1132 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 Q6ZSR6 202 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 PARS2Q7L3T8 475 aaKnown RBP9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 ABI3BPQ7Z7G0 1075 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 PARGQ86W56 976 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 AOPEPQ8N6M6 819 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 CCDC185Q8N715 623 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 DENND6BQ8NEG7 585 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 OR13H1Q8NG92 308 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 MDM1Q8TC05 714 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 PCDHB18PQ96TA0 734 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 EIF3CQ99613 913 aaKnown RBP9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 DUSP23Q9BVJ7 150 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 SLC17A9Q9BYT1 436 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 USP29Q9HBJ7 922 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 FZD3Q9NPG1 666 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 DNAJC28Q9NX36 388 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 NCKIPSDQ9NZQ3 722 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 MYO6Q9UM54 1294 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 RAXQ9Y2V3 346 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 FADS3Q9Y5Q0 445 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 HS3ST3A1Q9Y663 406 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 IGSF10Q6WRI0 2623 aa9.01□□□□□ -0.97
CTNNA1-240ENST00000523912 LRRC10BA6NIK2 292 aa9□□□□□ -0.97
CTNNA1-240ENST00000523912 FFAR2O15552 330 aa9□□□□□ -0.97
CTNNA1-240ENST00000523912 CCP110O43303 1012 aa9□□□□□ -0.97
CTNNA1-240ENST00000523912 SIGLEC6O43699 453 aa9□□□□□ -0.97
CTNNA1-240ENST00000523912 CREB3O43889 395 aa9□□□□□ -0.97
CTNNA1-240ENST00000523912 ZNF821O75541 412 aaPredicted RBP9□□□□□ -0.97
CTNNA1-240ENST00000523912 PIAS2O75928 621 aa9□□□□□ -0.97
CTNNA1-240ENST00000523912 TMCC1O94876 653 aa9□□□□□ -0.97
CTNNA1-240ENST00000523912 TNFAIP3P21580 790 aa9□□□□□ -0.97
CTNNA1-240ENST00000523912 DGKAP23743 735 aa9□□□□□ -0.97
CTNNA1-240ENST00000523912 ACP1P24666 158 aa9□□□□□ -0.97
CTNNA1-240ENST00000523912 PSMA2P25787 234 aa9□□□□□ -0.97
CTNNA1-240ENST00000523912 DUSP3P51452 185 aaPredicted RBP9□□□□□ -0.97
CTNNA1-240ENST00000523912 SUOXP51687 545 aa9□□□□□ -0.97
CTNNA1-240ENST00000523912 CLDN2P57739 230 aa9□□□□□ -0.97
CTNNA1-240ENST00000523912 YBEYP58557 167 aaPredicted RBP9□□□□□ -0.97
CTNNA1-240ENST00000523912 TPI1P60174 286 aa9□□□□□ -0.97
CTNNA1-240ENST00000523912 HNRNPKP61978 463 aaKnown RBP eCLIP9□□□□□ -0.97
CTNNA1-240ENST00000523912 TPM4P67936 248 aa9□□□□□ -0.97
CTNNA1-240ENST00000523912 CYP4F3Q08477 520 aa9□□□□□ -0.97
CTNNA1-240ENST00000523912 BNIP3Q12983 259 aa9□□□□□ -0.97
CTNNA1-240ENST00000523912 PTK2BQ14289 1009 aa9□□□□□ -0.97
CTNNA1-240ENST00000523912 GRM3Q14832 879 aa9□□□□□ -0.97
CTNNA1-240ENST00000523912 ASIC2Q16515 512 aa9□□□□□ -0.97
CTNNA1-240ENST00000523912 MYLK3Q32MK0 819 aa9□□□□□ -0.97
CTNNA1-240ENST00000523912 PROX2Q3B8N5 592 aa9□□□□□ -0.97
CTNNA1-240ENST00000523912 ACAD10Q6JQN1 1059 aa9□□□□□ -0.97
CTNNA1-240ENST00000523912 WDR59Q6PJI9 974 aa9□□□□□ -0.97
CTNNA1-240ENST00000523912 GCNT7Q6ZNI0 430 aa9□□□□□ -0.97
CTNNA1-240ENST00000523912 TMC6Q7Z403 805 aa9□□□□□ -0.97
CTNNA1-240ENST00000523912 CACTIN-AS1Q8N1I8 211 aa9□□□□□ -0.97
CTNNA1-240ENST00000523912 OR6K2Q8NGY2 324 aa9□□□□□ -0.97
CTNNA1-240ENST00000523912 OR4C6Q8NH72 309 aa9□□□□□ -0.97
CTNNA1-240ENST00000523912 CXorf40AQ8TE69 158 aa9□□□□□ -0.97
CTNNA1-240ENST00000523912 HNRNPLLQ8WVV9 542 aaKnown RBP9□□□□□ -0.97
CTNNA1-240ENST00000523912 TSC1Q92574 1164 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms