RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 LRRN4Q8WUT4 740 aa18.14■□□□□ 0.49
CLK4-211ENST00000522556 RAPGEF5Q92565 580 aa18.14■□□□□ 0.49
CLK4-211ENST00000522556 KLK6Q92876 244 aa18.14■□□□□ 0.49
CLK4-211ENST00000522556 NSMCE3Q96MG7 304 aa18.14■□□□□ 0.49
CLK4-211ENST00000522556 IL21RQ9HBE5 538 aa18.14■□□□□ 0.49
CLK4-211ENST00000522556 SALL4Q9UJQ4 1053 aa18.14■□□□□ 0.49
CLK4-211ENST00000522556 ITM2BQ9Y287 266 aa18.14■□□□□ 0.49
CLK4-211ENST00000522556 CA5BQ9Y2D0 317 aa18.14■□□□□ 0.49
CLK4-211ENST00000522556 FARP1Q9Y4F1 1045 aaPredicted RBP18.14■□□□□ 0.49
CLK4-211ENST00000522556 TBC1D3DA0A087WVF3 549 aa18.13■□□□□ 0.49
CLK4-211ENST00000522556 TBC1D3IA0A087WXS9 549 aa18.13■□□□□ 0.49
CLK4-211ENST00000522556 TBC1D3EA0A087X179 549 aa18.13■□□□□ 0.49
CLK4-211ENST00000522556 TBC1D3KA0A087X1G2 549 aa18.13■□□□□ 0.49
CLK4-211ENST00000522556 CXorf51AA0A1B0GTR3 108 aa18.13■□□□□ 0.49
CLK4-211ENST00000522556 A0A1W2PPC4 97 aa18.13■□□□□ 0.49
CLK4-211ENST00000522556 TBC1D3FA6NER0 549 aaPredicted RBP18.13■□□□□ 0.49
CLK4-211ENST00000522556 ZSCAN5CA6NGD5 496 aaPredicted RBP18.13■□□□□ 0.49
CLK4-211ENST00000522556 LRRC72A6NJI9 287 aa18.13■□□□□ 0.49
CLK4-211ENST00000522556 TBC1D3LB9A6J9 549 aa18.13■□□□□ 0.49
CLK4-211ENST00000522556 TM4SF5O14894 197 aa18.13■□□□□ 0.49
CLK4-211ENST00000522556 PIGNO95427 931 aa18.13■□□□□ 0.49
CLK4-211ENST00000522556 WNT1P04628 370 aa18.13■□□□□ 0.49
CLK4-211ENST00000522556 TBC1D3HP0C7X1 549 aa18.13■□□□□ 0.49
CLK4-211ENST00000522556 CD27P26842 260 aa18.13■□□□□ 0.49
CLK4-211ENST00000522556 DPP6P42658 865 aa18.13■□□□□ 0.49
CLK4-211ENST00000522556 MAGEA1P43355 309 aa18.13■□□□□ 0.49
CLK4-211ENST00000522556 PUM1Q14671 1186 aaKnown RBP eCLIP18.13■□□□□ 0.49
CLK4-211ENST00000522556 UAP1L1Q3KQV9 507 aa18.13■□□□□ 0.49
CLK4-211ENST00000522556 FAM182AQ5T1J6 154 aa18.13■□□□□ 0.49
CLK4-211ENST00000522556 NCBP2-AS2Q69YL0 99 aa18.13■□□□□ 0.49
CLK4-211ENST00000522556 TBC1D3GQ6DHY5 549 aa18.13■□□□□ 0.49
CLK4-211ENST00000522556 TBC1D3CQ6IPX1 549 aa18.13■□□□□ 0.49
CLK4-211ENST00000522556 TMCO3Q6UWJ1 677 aa18.13■□□□□ 0.49
CLK4-211ENST00000522556 ERN2Q76MJ5 926 aaKnown RBP18.13■□□□□ 0.49
CLK4-211ENST00000522556 TMEM139Q8IV31 216 aa18.13■□□□□ 0.49
CLK4-211ENST00000522556 TBC1D3Q8IZP1 549 aaPredicted RBP18.13■□□□□ 0.49
CLK4-211ENST00000522556 MINDY1Q8N5J2 469 aa18.13■□□□□ 0.49
CLK4-211ENST00000522556 TSEN2Q8NCE0 465 aaKnown RBP18.13■□□□□ 0.49
CLK4-211ENST00000522556 PCDH19Q8TAB3 1148 aa18.13■□□□□ 0.49
CLK4-211ENST00000522556 CEP76Q8TAP6 659 aa18.13■□□□□ 0.49
CLK4-211ENST00000522556 GDAP1L1Q96MZ0 367 aa18.13■□□□□ 0.49
CLK4-211ENST00000522556 PANX2Q96RD6 677 aa18.13■□□□□ 0.49
CLK4-211ENST00000522556 MYOCQ99972 504 aa18.13■□□□□ 0.49
CLK4-211ENST00000522556 CALN1Q9BXU9 219 aa18.13■□□□□ 0.49
CLK4-211ENST00000522556 TMEM9BQ9NQ34 198 aa18.13■□□□□ 0.49
CLK4-211ENST00000522556 SUSD2Q9UGT4 822 aa18.13■□□□□ 0.49
CLK4-211ENST00000522556 PCDHA13Q9Y5I0 950 aa18.13■□□□□ 0.49
CLK4-211ENST00000522556 A0A0U1RQJ8 604 aa18.12■□□□□ 0.49
CLK4-211ENST00000522556 TTC24A2A3L6 582 aaPredicted RBP18.12■□□□□ 0.49
CLK4-211ENST00000522556 ARHGAP33O14559 1287 aa18.12■□□□□ 0.49
CLK4-211ENST00000522556 SLC7A4O43246 635 aa18.12■□□□□ 0.49
CLK4-211ENST00000522556 LATO43561 262 aa18.12■□□□□ 0.49
CLK4-211ENST00000522556 FOXD2O60548 495 aaPredicted RBP18.12■□□□□ 0.49
CLK4-211ENST00000522556 PEX11BO96011 259 aa18.12■□□□□ 0.49
CLK4-211ENST00000522556 GNSP15586 552 aa18.12■□□□□ 0.49
CLK4-211ENST00000522556 PRLRP16471 622 aa18.12■□□□□ 0.49
CLK4-211ENST00000522556 ITIH2P19823 946 aa18.12■□□□□ 0.49
CLK4-211ENST00000522556 ITGB7P26010 798 aa18.12■□□□□ 0.49
CLK4-211ENST00000522556 ZNF135P52742 658 aaPredicted RBP18.12■□□□□ 0.49
CLK4-211ENST00000522556 SNRPD1P62314 119 aaKnown RBP18.12■□□□□ 0.49
CLK4-211ENST00000522556 HADHQ16836 314 aaKnown RBP18.12■□□□□ 0.49
CLK4-211ENST00000522556 MYLK3Q32MK0 819 aa18.12■□□□□ 0.49
CLK4-211ENST00000522556 INO80DQ53TQ3 878 aaPredicted RBP18.12■□□□□ 0.49
CLK4-211ENST00000522556 SEL1L3Q68CR1 1132 aa18.12■□□□□ 0.49
CLK4-211ENST00000522556 PQLC3Q8N755 202 aa18.12■□□□□ 0.49
CLK4-211ENST00000522556 ACRBPQ8NEB7 543 aa18.12■□□□□ 0.49
CLK4-211ENST00000522556 KLHL32Q96NJ5 620 aa18.12■□□□□ 0.49
CLK4-211ENST00000522556 RTKNQ9BST9 563 aa18.12■□□□□ 0.49
CLK4-211ENST00000522556 SP110Q9HB58 689 aa18.12■□□□□ 0.49
CLK4-211ENST00000522556 IPO11Q9UI26 975 aaKnown RBP18.12■□□□□ 0.49
CLK4-211ENST00000522556 INTUQ9ULD6 942 aa18.12■□□□□ 0.49
CLK4-211ENST00000522556 ZFR2Q9UPR6 939 aaKnown RBP18.12■□□□□ 0.49
CLK4-211ENST00000522556 LRRK1Q38SD2 2015 aa18.11■□□□□ 0.49
CLK4-211ENST00000522556 KCNK3O14649 394 aa18.11■□□□□ 0.49
CLK4-211ENST00000522556 BUB1BO60566 1050 aaPredicted RBP18.11■□□□□ 0.49
CLK4-211ENST00000522556 RNGTTO60942 597 aaKnown RBP18.11■□□□□ 0.49
CLK4-211ENST00000522556 IGSF6O95976 241 aa18.11■□□□□ 0.49
CLK4-211ENST00000522556 TNNT1P13805 278 aa18.11■□□□□ 0.49
CLK4-211ENST00000522556 ADRB3P13945 408 aa18.11■□□□□ 0.49
CLK4-211ENST00000522556 CCR5P51681 352 aa18.11■□□□□ 0.49
CLK4-211ENST00000522556 NEK3P51956 506 aa18.11■□□□□ 0.49
CLK4-211ENST00000522556 SLC10A7Q0GE19 358 aa18.11■□□□□ 0.49
CLK4-211ENST00000522556 SFSWAPQ12872 951 aaKnown RBP18.11■□□□□ 0.49
CLK4-211ENST00000522556 KDM7AQ6ZMT4 941 aa18.11■□□□□ 0.49
CLK4-211ENST00000522556 ZSWIM9Q86XI8 627 aa18.11■□□□□ 0.49
CLK4-211ENST00000522556 RHOT2Q8IXI1 618 aa18.11■□□□□ 0.49
CLK4-211ENST00000522556 PLPP6Q8IY26 295 aa18.11■□□□□ 0.49
CLK4-211ENST00000522556 HDAC8Q9BY41 377 aa18.11■□□□□ 0.49
CLK4-211ENST00000522556 CAAP1Q9H8G2 361 aa18.11■□□□□ 0.49
CLK4-211ENST00000522556 FZD3Q9NPG1 666 aa18.11■□□□□ 0.49
CLK4-211ENST00000522556 DYRK4Q9NR20 520 aa18.11■□□□□ 0.49
CLK4-211ENST00000522556 FNDC3AQ9Y2H6 1198 aaKnown RBP18.11■□□□□ 0.49
CLK4-211ENST00000522556 SNX11Q9Y5W9 270 aa18.11■□□□□ 0.49
CLK4-211ENST00000522556 A0A1W2PQU0 124 aa18.1■□□□□ 0.49
CLK4-211ENST00000522556 C3orf70A6NLC5 250 aaPredicted RBP18.1■□□□□ 0.49
CLK4-211ENST00000522556 C16orf96A6NNT2 1141 aa18.1■□□□□ 0.49
CLK4-211ENST00000522556 GIPC1O14908 333 aa18.1■□□□□ 0.49
CLK4-211ENST00000522556 PALMO75781 387 aa18.1■□□□□ 0.49
CLK4-211ENST00000522556 NDUFA10O95299 355 aa18.1■□□□□ 0.49
CLK4-211ENST00000522556 POP4O95707 220 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms