RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 OPRD1P41143 372 aa13.26□□□□□ -0.29
CPNE3-205ENST00000522240 GEMP55040 296 aa13.26□□□□□ -0.29
CPNE3-205ENST00000522240 PLTPP55058 493 aa13.26□□□□□ -0.29
CPNE3-205ENST00000522240 CBLBQ13191 982 aa13.26□□□□□ -0.29
CPNE3-205ENST00000522240 CYTH1Q15438 398 aa13.26□□□□□ -0.29
CPNE3-205ENST00000522240 GEN1Q17RS7 908 aa13.26□□□□□ -0.29
CPNE3-205ENST00000522240 FAXCQ5TGI0 409 aa13.26□□□□□ -0.29
CPNE3-205ENST00000522240 MBLAC2Q68D91 279 aa13.26□□□□□ -0.29
CPNE3-205ENST00000522240 KCTD11Q693B1 232 aa13.26□□□□□ -0.29
CPNE3-205ENST00000522240 SUGP1Q8IWZ8 645 aaKnown RBP13.26□□□□□ -0.29
CPNE3-205ENST00000522240 ZCCHC9Q8N567 271 aaKnown RBP13.26□□□□□ -0.29
CPNE3-205ENST00000522240 NAT16Q8N8M0 369 aa13.26□□□□□ -0.29
CPNE3-205ENST00000522240 TERB1Q8NA31 727 aa13.26□□□□□ -0.29
CPNE3-205ENST00000522240 MCUQ8NE86 351 aa13.26□□□□□ -0.29
CPNE3-205ENST00000522240 ST13P5Q8NFI4 369 aaPredicted RBP13.26□□□□□ -0.29
CPNE3-205ENST00000522240 CSGALNACT1Q8TDX6 532 aa13.26□□□□□ -0.29
CPNE3-205ENST00000522240 AENQ8WTP8 325 aaKnown RBP13.26□□□□□ -0.29
CPNE3-205ENST00000522240 HNRNPLLQ8WVV9 542 aaKnown RBP13.26□□□□□ -0.29
CPNE3-205ENST00000522240 ISG20Q96AZ6 181 aaKnown RBP13.26□□□□□ -0.29
CPNE3-205ENST00000522240 TADA1Q96BN2 335 aa13.26□□□□□ -0.29
CPNE3-205ENST00000522240 IMP4Q96G21 291 aaKnown RBP13.26□□□□□ -0.29
CPNE3-205ENST00000522240 HINFPQ9BQA5 517 aa13.26□□□□□ -0.29
CPNE3-205ENST00000522240 CEP44Q9C0F1 390 aa13.26□□□□□ -0.29
CPNE3-205ENST00000522240 LRRC40Q9H9A6 602 aa13.26□□□□□ -0.29
CPNE3-205ENST00000522240 KCNK12Q9HB15 430 aa13.26□□□□□ -0.29
CPNE3-205ENST00000522240 VPS45Q9NRW7 570 aa13.26□□□□□ -0.29
CPNE3-205ENST00000522240 GTSE1Q9NYZ3 720 aa13.26□□□□□ -0.29
CPNE3-205ENST00000522240 LHX3Q9UBR4 397 aa13.26□□□□□ -0.29
CPNE3-205ENST00000522240 RAPGEFL1Q9UHV5 662 aa13.26□□□□□ -0.29
CPNE3-205ENST00000522240 PPFIA2O75334 1257 aa13.25□□□□□ -0.29
CPNE3-205ENST00000522240 SUN1O94901 812 aa13.25□□□□□ -0.29
CPNE3-205ENST00000522240 ATP5BP06576 529 aaKnown RBP13.25□□□□□ -0.29
CPNE3-205ENST00000522240 APRTP07741 180 aa13.25□□□□□ -0.29
CPNE3-205ENST00000522240 SRPRAP08240 638 aaKnown RBP13.25□□□□□ -0.29
CPNE3-205ENST00000522240 MLNP12872 115 aa13.25□□□□□ -0.29
CPNE3-205ENST00000522240 SRCP12931 536 aa13.25□□□□□ -0.29
CPNE3-205ENST00000522240 POLR2EP19388 210 aaKnown RBP13.25□□□□□ -0.29
CPNE3-205ENST00000522240 CR2P20023 1033 aa13.25□□□□□ -0.29
CPNE3-205ENST00000522240 SARNPP82979 210 aaKnown RBP13.25□□□□□ -0.29
CPNE3-205ENST00000522240 ECT2LQ008S8 904 aa13.25□□□□□ -0.29
CPNE3-205ENST00000522240 NSUN2Q08J23 767 aaKnown RBP eCLIP13.25□□□□□ -0.29
CPNE3-205ENST00000522240 MPP3Q13368 585 aa13.25□□□□□ -0.29
CPNE3-205ENST00000522240 ANKRD22Q5VYY1 191 aa13.25□□□□□ -0.29
CPNE3-205ENST00000522240 TMEM215Q68D42 235 aa13.25□□□□□ -0.29
CPNE3-205ENST00000522240 LINGO4Q6UY18 593 aa13.25□□□□□ -0.29
CPNE3-205ENST00000522240 LEKR1Q6ZMV7 388 aa13.25□□□□□ -0.29
CPNE3-205ENST00000522240 GSPT2Q8IYD1 628 aaKnown RBP13.25□□□□□ -0.29
CPNE3-205ENST00000522240 PGBD5Q8N414 524 aa13.25□□□□□ -0.29
CPNE3-205ENST00000522240 TAB3Q8N5C8 712 aaPredicted RBP13.25□□□□□ -0.29
CPNE3-205ENST00000522240 SH2D3CQ8N5H7 860 aa13.25□□□□□ -0.29
CPNE3-205ENST00000522240 KDM1BQ8NB78 822 aa13.25□□□□□ -0.29
CPNE3-205ENST00000522240 TSEN2Q8NCE0 465 aaKnown RBP13.25□□□□□ -0.29
CPNE3-205ENST00000522240 CAVIN3Q969G5 261 aa13.25□□□□□ -0.29
CPNE3-205ENST00000522240 MSANTD3Q96H12 275 aa13.25□□□□□ -0.29
CPNE3-205ENST00000522240 MLPHQ9BV36 600 aaPredicted RBP13.25□□□□□ -0.29
CPNE3-205ENST00000522240 FAM153AQ9UHL3 310 aa13.25□□□□□ -0.29
CPNE3-205ENST00000522240 TTLL3Q9Y4R7 772 aa13.25□□□□□ -0.29
CPNE3-205ENST00000522240 ACTL7AQ9Y615 435 aa13.25□□□□□ -0.29
CPNE3-205ENST00000522240 MIA3Q5JRA6 1907 aa13.25□□□□□ -0.29
CPNE3-205ENST00000522240 TCRBV7S3A2A0A539 114 aa13.24□□□□□ -0.29
CPNE3-205ENST00000522240 LOC730098B7Z3J9 87 aa13.24□□□□□ -0.29
CPNE3-205ENST00000522240 AP3B1O00203 1094 aa13.24□□□□□ -0.29
CPNE3-205ENST00000522240 MUSKO15146 869 aa13.24□□□□□ -0.29
CPNE3-205ENST00000522240 EIF3HO15372 352 aaKnown RBP eCLIP13.24□□□□□ -0.29
CPNE3-205ENST00000522240 TIMM44O43615 452 aa13.24□□□□□ -0.29
CPNE3-205ENST00000522240 GSRP00390 522 aa13.24□□□□□ -0.29
CPNE3-205ENST00000522240 DLDP09622 509 aaKnown RBP13.24□□□□□ -0.29
CPNE3-205ENST00000522240 MAPK8P45983 427 aa13.24□□□□□ -0.29
CPNE3-205ENST00000522240 CSNK1DP48730 415 aa13.24□□□□□ -0.29
CPNE3-205ENST00000522240 LMAN1P49257 510 aa13.24□□□□□ -0.29
CPNE3-205ENST00000522240 NUMBP49757 651 aa13.24□□□□□ -0.29
CPNE3-205ENST00000522240 ARL4CP56559 192 aa13.24□□□□□ -0.29
CPNE3-205ENST00000522240 MAXP61244 160 aa13.24□□□□□ -0.29
CPNE3-205ENST00000522240 RHOAP61586 193 aa13.24□□□□□ -0.29
CPNE3-205ENST00000522240 AP1S1P61966 158 aa13.24□□□□□ -0.29
CPNE3-205ENST00000522240 KDSRQ06136 332 aa13.24□□□□□ -0.29
CPNE3-205ENST00000522240 E2F5Q15329 346 aa13.24□□□□□ -0.29
CPNE3-205ENST00000522240 HIF1AQ16665 826 aa13.24□□□□□ -0.29
CPNE3-205ENST00000522240 NAPEPLDQ6IQ20 393 aa13.24□□□□□ -0.29
CPNE3-205ENST00000522240 C22orf39Q6P5X5 142 aa13.24□□□□□ -0.29
CPNE3-205ENST00000522240 NUDT18Q6ZVK8 323 aa13.24□□□□□ -0.29
CPNE3-205ENST00000522240 LINC00523Q86TU6 105 aa13.24□□□□□ -0.29
CPNE3-205ENST00000522240 SLC44A3Q8N4M1 653 aa13.24□□□□□ -0.29
CPNE3-205ENST00000522240 PCDH20Q8N6Y1 951 aaKnown RBP13.24□□□□□ -0.29
CPNE3-205ENST00000522240 ATP11CQ8NB49 1132 aa13.24□□□□□ -0.29
CPNE3-205ENST00000522240 ARRDC2Q8TBH0 407 aa13.24□□□□□ -0.29
CPNE3-205ENST00000522240 ANKRD7Q92527 254 aa13.24□□□□□ -0.29
CPNE3-205ENST00000522240 CHFRQ96EP1 664 aa13.24□□□□□ -0.29
CPNE3-205ENST00000522240 OXNAD1Q96HP4 312 aaPredicted RBP13.24□□□□□ -0.29
CPNE3-205ENST00000522240 NUDCD1Q96RS6 583 aa13.24□□□□□ -0.29
CPNE3-205ENST00000522240 C8orf33Q9H7E9 229 aaPredicted RBP13.24□□□□□ -0.29
CPNE3-205ENST00000522240 XAB2Q9HCS7 855 aaKnown RBP13.24□□□□□ -0.29
CPNE3-205ENST00000522240 PRKAG3Q9UGI9 489 aa13.24□□□□□ -0.29
CPNE3-205ENST00000522240 HCN4Q9Y3Q4 1203 aa13.24□□□□□ -0.29
CPNE3-205ENST00000522240 MYO18AQ92614 2054 aaKnown RBP13.24□□□□□ -0.29
CPNE3-205ENST00000522240 E7ESA3 106 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 F5H423 210 aaPredicted RBP13.23□□□□□ -0.29
CPNE3-205ENST00000522240 TRIM24O15164 1050 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 ATP9BO43861 1147 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 GPR37L1O60883 481 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms