RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 ARFGAP3Q9NP61 516 aa21.68■■□□□ 1.06
R3HCC1-208ENST00000522012 SCUBE2Q9NQ36 999 aa21.68■■□□□ 1.06
R3HCC1-208ENST00000522012 HS3ST2Q9Y278 367 aa21.68■■□□□ 1.06
R3HCC1-208ENST00000522012 TBC1D3BA6NDS4 549 aa21.67■■□□□ 1.06
R3HCC1-208ENST00000522012 PRRT4C9JH25 899 aa21.67■■□□□ 1.06
R3HCC1-208ENST00000522012 MMP2P08253 660 aa21.67■■□□□ 1.06
R3HCC1-208ENST00000522012 GRIA1P42261 906 aa21.67■■□□□ 1.06
R3HCC1-208ENST00000522012 DHX9Q08211 1270 aaKnown RBP21.67■■□□□ 1.06
R3HCC1-208ENST00000522012 MTM1Q13496 603 aa21.67■■□□□ 1.06
R3HCC1-208ENST00000522012 HIF1AQ16665 826 aa21.67■■□□□ 1.06
R3HCC1-208ENST00000522012 FNBP1LQ5T0N5 605 aa21.67■■□□□ 1.06
R3HCC1-208ENST00000522012 KCTD11Q693B1 232 aa21.67■■□□□ 1.06
R3HCC1-208ENST00000522012 SH2D3CQ8N5H7 860 aa21.67■■□□□ 1.06
R3HCC1-208ENST00000522012 TM6SF2Q9BZW4 377 aa21.67■■□□□ 1.06
R3HCC1-208ENST00000522012 TSPYL1Q9H0U9 437 aa21.67■■□□□ 1.06
R3HCC1-208ENST00000522012 ELOVL2Q9NXB9 296 aa21.67■■□□□ 1.06
R3HCC1-208ENST00000522012 SLCO3A1Q9UIG8 710 aa21.67■■□□□ 1.06
R3HCC1-208ENST00000522012 USP12O75317 370 aa21.66■■□□□ 1.06
R3HCC1-208ENST00000522012 ASLP04424 464 aa21.66■■□□□ 1.06
R3HCC1-208ENST00000522012 NNMTP40261 264 aa21.66■■□□□ 1.06
R3HCC1-208ENST00000522012 EIF2DP41214 584 aaKnown RBP21.66■■□□□ 1.06
R3HCC1-208ENST00000522012 SKOR1P84550 965 aa21.66■■□□□ 1.06
R3HCC1-208ENST00000522012 NSUN2Q08J23 767 aaKnown RBP eCLIP21.66■■□□□ 1.06
R3HCC1-208ENST00000522012 MPP3Q13368 585 aa21.66■■□□□ 1.06
R3HCC1-208ENST00000522012 OLIG2Q13516 323 aa21.66■■□□□ 1.06
R3HCC1-208ENST00000522012 PCSK7Q16549 785 aa21.66■■□□□ 1.06
R3HCC1-208ENST00000522012 PREPLQ4J6C6 727 aaPredicted RBP21.66■■□□□ 1.06
R3HCC1-208ENST00000522012 BEND6Q5SZJ8 279 aaPredicted RBP21.66■■□□□ 1.06
R3HCC1-208ENST00000522012 ATXN7L2Q5T6C5 722 aaPredicted RBP21.66■■□□□ 1.06
R3HCC1-208ENST00000522012 ALG1LQ6GMV1 187 aa21.66■■□□□ 1.06
R3HCC1-208ENST00000522012 CENPUQ71F23 418 aa21.66■■□□□ 1.06
R3HCC1-208ENST00000522012 KDELC2Q7Z4H8 507 aa21.66■■□□□ 1.06
R3HCC1-208ENST00000522012 PDIK1LQ8N165 341 aa21.66■■□□□ 1.06
R3HCC1-208ENST00000522012 PHTF2Q8N3S3 785 aa21.66■■□□□ 1.06
R3HCC1-208ENST00000522012 TERB1Q8NA31 727 aa21.66■■□□□ 1.06
R3HCC1-208ENST00000522012 CAVIN3Q969G5 261 aa21.66■■□□□ 1.06
R3HCC1-208ENST00000522012 CHFRQ96EP1 664 aa21.66■■□□□ 1.06
R3HCC1-208ENST00000522012 SERPINB12Q96P63 405 aa21.66■■□□□ 1.06
R3HCC1-208ENST00000522012 NUDCD1Q96RS6 583 aa21.66■■□□□ 1.06
R3HCC1-208ENST00000522012 FRMD8Q9BZ67 464 aaPredicted RBP21.66■■□□□ 1.06
R3HCC1-208ENST00000522012 TNKS2Q9H2K2 1166 aa21.66■■□□□ 1.06
R3HCC1-208ENST00000522012 NOD2Q9HC29 1040 aa21.66■■□□□ 1.06
R3HCC1-208ENST00000522012 INSIG1O15503 277 aa21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 TIMM44O43615 452 aa21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 AVILO75366 819 aa21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 SUN1O94901 812 aa21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 DLDP09622 509 aaKnown RBP21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 CR2P20023 1033 aa21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 CES1P23141 567 aa21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 WNT3AP56704 352 aa21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 DLG2Q15700 870 aa21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 DGKKQ5KSL6 1271 aa21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 CAND1Q86VP6 1230 aaKnown RBP21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 KLHDC8BQ8IXV7 354 aa21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 APOL2Q9BQE5 337 aa21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 FICDQ9BVA6 458 aa21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 FSD1LQ9BXM9 530 aa21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 SAYSD1Q9NPB0 183 aa21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 VPS45Q9NRW7 570 aa21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 PLA2G4CQ9UP65 541 aa21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 PPFIA2O75334 1257 aa21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 KAT7O95251 611 aa21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 AGTP01019 485 aa21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 SERPINF2P08697 491 aa21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 PDIA2Q13087 525 aaKnown RBP21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 IHHQ14623 411 aa21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 SLMAPQ14BN4 828 aa21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 BBS9Q3SYG4 887 aa21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 NAPEPLDQ6IQ20 393 aa21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 C22orf39Q6P5X5 142 aa21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 KDELC1Q6UW63 502 aa21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 CEP128Q6ZU80 1094 aa21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 TMC3Q7Z5M5 1100 aa21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 SFTPA1Q8IWL2 248 aa21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 RYBPQ8N488 228 aaPredicted RBP21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 OR52K1Q8NGK4 314 aa21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 TADA1Q96BN2 335 aa21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 MRGPRX3Q96LB0 322 aa21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 MRGPRX2Q96LB1 330 aa21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 TBL1YQ9BQ87 522 aa21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 CEP44Q9C0F1 390 aa21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 XAB2Q9HCS7 855 aaKnown RBP21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 PIH1D1Q9NWS0 290 aaKnown RBP21.65■■□□□ 1.06
R3HCC1-208ENST00000522012 BNIP3LO60238 219 aa21.64■■□□□ 1.05
R3HCC1-208ENST00000522012 IGSF6O95976 241 aa21.64■■□□□ 1.05
R3HCC1-208ENST00000522012 APODP05090 189 aa21.64■■□□□ 1.05
R3HCC1-208ENST00000522012 SRPRAP08240 638 aaKnown RBP21.64■■□□□ 1.05
R3HCC1-208ENST00000522012 GRIA2P42262 883 aa21.64■■□□□ 1.05
R3HCC1-208ENST00000522012 GALK1P51570 392 aa21.64■■□□□ 1.05
R3HCC1-208ENST00000522012 ST8SIA6P61647 398 aa21.64■■□□□ 1.05
R3HCC1-208ENST00000522012 EIF4HQ15056 248 aaKnown RBP21.64■■□□□ 1.05
R3HCC1-208ENST00000522012 PTPRNQ16849 979 aa21.64■■□□□ 1.05
R3HCC1-208ENST00000522012 MSS51Q4VC12 460 aa21.64■■□□□ 1.05
R3HCC1-208ENST00000522012 HP1BP3Q5SSJ5 553 aaPredicted RBP21.64■■□□□ 1.05
R3HCC1-208ENST00000522012 LRRC8BQ6P9F7 803 aa21.64■■□□□ 1.05
R3HCC1-208ENST00000522012 NUDT18Q6ZVK8 323 aa21.64■■□□□ 1.05
R3HCC1-208ENST00000522012 ZNF534Q76KX8 674 aa21.64■■□□□ 1.05
R3HCC1-208ENST00000522012 SRLQ86TD4 932 aa21.64■■□□□ 1.05
R3HCC1-208ENST00000522012 LINC00523Q86TU6 105 aa21.64■■□□□ 1.05
R3HCC1-208ENST00000522012 DNAAF3Q8N9W5 541 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms