RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 LEKR1Q6ZMV7 388 aa17.34■□□□□ 0.37
SQLE-205ENST00000521232 SLCO6A1Q86UG4 719 aa17.34■□□□□ 0.37
SQLE-205ENST00000521232 SPATS2Q86XZ4 545 aaKnown RBP17.34■□□□□ 0.37
SQLE-205ENST00000521232 CHCHD4Q8N4Q1 142 aa17.34■□□□□ 0.37
SQLE-205ENST00000521232 TMEM145Q8NBT3 493 aa17.34■□□□□ 0.37
SQLE-205ENST00000521232 ADAMTS14Q8WXS8 1223 aa17.34■□□□□ 0.37
SQLE-205ENST00000521232 ZNF653Q96CK0 615 aa17.34■□□□□ 0.37
SQLE-205ENST00000521232 HMCESQ96FZ2 354 aa17.34■□□□□ 0.37
SQLE-205ENST00000521232 TMEM121BQ9BXQ6 578 aaPredicted RBP17.34■□□□□ 0.37
SQLE-205ENST00000521232 TRIM7Q9C029 511 aa17.34■□□□□ 0.37
SQLE-205ENST00000521232 KLC2Q9H0B6 622 aa17.34■□□□□ 0.37
SQLE-205ENST00000521232 MRPL47Q9HD33 250 aaKnown RBP17.34■□□□□ 0.37
SQLE-205ENST00000521232 AP4E1Q9UPM8 1137 aa17.34■□□□□ 0.37
SQLE-205ENST00000521232 ZFR2Q9UPR6 939 aaKnown RBP17.34■□□□□ 0.37
SQLE-205ENST00000521232 APOBEC2Q9Y235 224 aaKnown RBP17.34■□□□□ 0.37
SQLE-205ENST00000521232 ARID1BQ8NFD5 2236 aaPredicted RBP17.33■□□□□ 0.37
SQLE-205ENST00000521232 YKT6O15498 198 aa17.33■□□□□ 0.36
SQLE-205ENST00000521232 AP1G1O43747 822 aa17.33■□□□□ 0.36
SQLE-205ENST00000521232 PCDH8O95206 1070 aa17.33■□□□□ 0.36
SQLE-205ENST00000521232 MIPP30301 263 aa17.33■□□□□ 0.36
SQLE-205ENST00000521232 NDST2P52849 883 aa17.33■□□□□ 0.36
SQLE-205ENST00000521232 TPI1P60174 286 aa17.33■□□□□ 0.36
SQLE-205ENST00000521232 IL9RQ01113 521 aa17.33■□□□□ 0.36
SQLE-205ENST00000521232 CA9Q16790 459 aa17.33■□□□□ 0.36
SQLE-205ENST00000521232 FBXL19Q6PCT2 694 aa17.33■□□□□ 0.36
SQLE-205ENST00000521232 PSTKQ8IV42 348 aaKnown RBP17.33■□□□□ 0.36
SQLE-205ENST00000521232 RYBPQ8N488 228 aaPredicted RBP17.33■□□□□ 0.36
SQLE-205ENST00000521232 OXR1Q8N573 874 aa17.33■□□□□ 0.36
SQLE-205ENST00000521232 PNPLA1Q8N8W4 532 aa17.33■□□□□ 0.36
SQLE-205ENST00000521232 SAP25Q8TEE9 199 aa17.33■□□□□ 0.36
SQLE-205ENST00000521232 PEBP4Q96S96 227 aa17.33■□□□□ 0.36
SQLE-205ENST00000521232 NCAPGQ9BPX3 1015 aa17.33■□□□□ 0.36
SQLE-205ENST00000521232 DHX35Q9H5Z1 703 aaKnown RBP17.33■□□□□ 0.36
SQLE-205ENST00000521232 ZDHHC6Q9H6R6 413 aa17.33■□□□□ 0.36
SQLE-205ENST00000521232 LRRC19Q9H756 370 aa17.33■□□□□ 0.36
SQLE-205ENST00000521232 GPATCH2LQ9NWQ4 482 aa17.33■□□□□ 0.36
SQLE-205ENST00000521232 TOR4AQ9NXH8 423 aa17.33■□□□□ 0.36
SQLE-205ENST00000521232 PCSK1NQ9UHG2 260 aa17.33■□□□□ 0.36
SQLE-205ENST00000521232 MSRB2Q9Y3D2 182 aa17.33■□□□□ 0.36
SQLE-205ENST00000521232 FADS3Q9Y5Q0 445 aa17.33■□□□□ 0.36
SQLE-205ENST00000521232 IGF2RP11717 2491 aa17.32■□□□□ 0.36
SQLE-205ENST00000521232 C16orf96A6NNT2 1141 aa17.32■□□□□ 0.36
SQLE-205ENST00000521232 EEF2KO00418 725 aaKnown RBP17.32■□□□□ 0.36
SQLE-205ENST00000521232 SLC31A1O15431 190 aa17.32■□□□□ 0.36
SQLE-205ENST00000521232 LRCH4O75427 683 aa17.32■□□□□ 0.36
SQLE-205ENST00000521232 TMCC1O94876 653 aa17.32■□□□□ 0.36
SQLE-205ENST00000521232 DKK1O94907 266 aa17.32■□□□□ 0.36
SQLE-205ENST00000521232 SERPING1P05155 500 aa17.32■□□□□ 0.36
SQLE-205ENST00000521232 PROS1P07225 676 aa17.32■□□□□ 0.36
SQLE-205ENST00000521232 GKP32189 559 aa17.32■□□□□ 0.36
SQLE-205ENST00000521232 ARRB1P49407 418 aaPredicted RBP17.32■□□□□ 0.36
SQLE-205ENST00000521232 ACAP1Q15027 740 aa17.32■□□□□ 0.36
SQLE-205ENST00000521232 TMEM259Q4ZIN3 620 aa17.32■□□□□ 0.36
SQLE-205ENST00000521232 TDRD12Q587J7 1177 aaKnown RBP17.32■□□□□ 0.36
SQLE-205ENST00000521232 ZNF805Q5CZA5 627 aa17.32■□□□□ 0.36
SQLE-205ENST00000521232 CYP4V2Q6ZWL3 525 aaPredicted RBP17.32■□□□□ 0.36
SQLE-205ENST00000521232 PARS2Q7L3T8 475 aaKnown RBP17.32■□□□□ 0.36
SQLE-205ENST00000521232 ZNF354CQ86Y25 554 aa17.32■□□□□ 0.36
SQLE-205ENST00000521232 OR6K2Q8NGY2 324 aa17.32■□□□□ 0.36
SQLE-205ENST00000521232 CPLX3Q8WVH0 158 aa17.32■□□□□ 0.36
SQLE-205ENST00000521232 KLK6Q92876 244 aa17.32■□□□□ 0.36
SQLE-205ENST00000521232 RAB7BQ96AH8 199 aa17.32■□□□□ 0.36
SQLE-205ENST00000521232 KLHDC7BQ96G42 594 aa17.32■□□□□ 0.36
SQLE-205ENST00000521232 FEM1CQ96JP0 617 aa17.32■□□□□ 0.36
SQLE-205ENST00000521232 SNRNP25Q9BV90 132 aaKnown RBP17.32■□□□□ 0.36
SQLE-205ENST00000521232 OSBPL1AQ9BXW6 950 aa17.32■□□□□ 0.36
SQLE-205ENST00000521232 IFNKQ9P0W0 207 aa17.32■□□□□ 0.36
SQLE-205ENST00000521232 MYO1AQ9UBC5 1043 aa17.32■□□□□ 0.36
SQLE-205ENST00000521232 KLK13Q9UKR3 277 aa17.32■□□□□ 0.36
SQLE-205ENST00000521232 LUC7L2Q9Y383 392 aaKnown RBP17.32■□□□□ 0.36
SQLE-205ENST00000521232 MFHAS1Q9Y4C4 1052 aa17.32■□□□□ 0.36
SQLE-205ENST00000521232 C1QTNF9BB2RNN3 333 aa17.31■□□□□ 0.36
SQLE-205ENST00000521232 KRIT1O00522 736 aa17.31■□□□□ 0.36
SQLE-205ENST00000521232 TNFSF14O43557 240 aa17.31■□□□□ 0.36
SQLE-205ENST00000521232 PRPSAP2O60256 369 aa17.31■□□□□ 0.36
SQLE-205ENST00000521232 ATXN1LP0C7T5 689 aaKnown RBP17.31■□□□□ 0.36
SQLE-205ENST00000521232 C1QTNF9P0C862 333 aa17.31■□□□□ 0.36
SQLE-205ENST00000521232 PRLRP16471 622 aa17.31■□□□□ 0.36
SQLE-205ENST00000521232 HNRNPA2B1P22626 353 aaKnown RBP17.31■□□□□ 0.36
SQLE-205ENST00000521232 PCK1P35558 622 aa17.31■□□□□ 0.36
SQLE-205ENST00000521232 HCAR3P49019 387 aa17.31■□□□□ 0.36
SQLE-205ENST00000521232 ZNF135P52742 658 aaPredicted RBP17.31■□□□□ 0.36
SQLE-205ENST00000521232 RPS21P63220 83 aaKnown RBP17.31■□□□□ 0.36
SQLE-205ENST00000521232 CYTH1Q15438 398 aa17.31■□□□□ 0.36
SQLE-205ENST00000521232 ST3GAL2Q16842 350 aa17.31■□□□□ 0.36
SQLE-205ENST00000521232 INAVAQ3KP66 663 aa17.31■□□□□ 0.36
SQLE-205ENST00000521232 ATXN7L2Q5T6C5 722 aaPredicted RBP17.31■□□□□ 0.36
SQLE-205ENST00000521232 SEL1L3Q68CR1 1132 aa17.31■□□□□ 0.36
SQLE-205ENST00000521232 KIAA1161Q6NSJ0 714 aa17.31■□□□□ 0.36
SQLE-205ENST00000521232 UNQ6494/PRO21346Q6UXR6 183 aa17.31■□□□□ 0.36
SQLE-205ENST00000521232 VPS36Q86VN1 386 aa17.31■□□□□ 0.36
SQLE-205ENST00000521232 ZSCAN30Q86W11 494 aa17.31■□□□□ 0.36
SQLE-205ENST00000521232 GATAD2AQ86YP4 633 aa17.31■□□□□ 0.36
SQLE-205ENST00000521232 GATA6Q92908 595 aa17.31■□□□□ 0.36
SQLE-205ENST00000521232 GDAP1L1Q96MZ0 367 aa17.31■□□□□ 0.36
SQLE-205ENST00000521232 KCTD15Q96SI1 283 aaPredicted RBP17.31■□□□□ 0.36
SQLE-205ENST00000521232 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.31■□□□□ 0.36
SQLE-205ENST00000521232 SLC17A9Q9BYT1 436 aa17.31■□□□□ 0.36
SQLE-205ENST00000521232 CA5BQ9Y2D0 317 aa17.31■□□□□ 0.36
SQLE-205ENST00000521232 HS3ST3A1Q9Y663 406 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms