RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 IGLON5A6NGN9 336 aa16.72■□□□□ 0.27
TRAM1-204ENST00000521049 I6L893 689 aaPredicted RBP16.72■□□□□ 0.27
TRAM1-204ENST00000521049 SLC28A2O43868 658 aa16.72■□□□□ 0.27
TRAM1-204ENST00000521049 ZMPSTE24O75844 475 aa16.72■□□□□ 0.27
TRAM1-204ENST00000521049 TNFSF15O95150 251 aa16.72■□□□□ 0.27
TRAM1-204ENST00000521049 ERBB2P04626 1255 aa16.72■□□□□ 0.27
TRAM1-204ENST00000521049 USP8P40818 1118 aa16.72■□□□□ 0.27
TRAM1-204ENST00000521049 CLN3Q13286 438 aa16.72■□□□□ 0.27
TRAM1-204ENST00000521049 PTK2BQ14289 1009 aa16.72■□□□□ 0.27
TRAM1-204ENST00000521049 PERM1Q5SV97 790 aa16.72■□□□□ 0.27
TRAM1-204ENST00000521049 OTUD1Q5VV17 481 aaPredicted RBP16.72■□□□□ 0.27
TRAM1-204ENST00000521049 XKR5Q6UX68 686 aa16.72■□□□□ 0.27
TRAM1-204ENST00000521049 C1orf131Q8NDD1 294 aaKnown RBP16.72■□□□□ 0.27
TRAM1-204ENST00000521049 DENND6BQ8NEG7 585 aa16.72■□□□□ 0.27
TRAM1-204ENST00000521049 OR7D4Q8NG98 312 aa16.72■□□□□ 0.27
TRAM1-204ENST00000521049 NAT6Q93015 286 aa16.72■□□□□ 0.27
TRAM1-204ENST00000521049 RAB7BQ96AH8 199 aa16.72■□□□□ 0.27
TRAM1-204ENST00000521049 CCNL2Q96S94 520 aaPredicted RBP16.72■□□□□ 0.27
TRAM1-204ENST00000521049 SPON2Q9BUD6 331 aa16.72■□□□□ 0.27
TRAM1-204ENST00000521049 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.72■□□□□ 0.27
TRAM1-204ENST00000521049 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.72■□□□□ 0.27
TRAM1-204ENST00000521049 MPP6Q9NZW5 540 aa16.72■□□□□ 0.27
TRAM1-204ENST00000521049 STAP1Q9ULZ2 295 aa16.72■□□□□ 0.27
TRAM1-204ENST00000521049 CCDC187A0A096LP49 1063 aa16.71■□□□□ 0.27
TRAM1-204ENST00000521049 MUSKO15146 869 aa16.71■□□□□ 0.27
TRAM1-204ENST00000521049 ARHGAP6O43182 974 aa16.71■□□□□ 0.27
TRAM1-204ENST00000521049 BMP6P22004 513 aa16.71■□□□□ 0.27
TRAM1-204ENST00000521049 SERPINH1P50454 418 aaKnown RBP16.71■□□□□ 0.27
TRAM1-204ENST00000521049 PTK2Q05397 1052 aa16.71■□□□□ 0.27
TRAM1-204ENST00000521049 ARHGAP44Q17R89 818 aa16.71■□□□□ 0.27
TRAM1-204ENST00000521049 TPRG1LQ5T0D9 272 aa16.71■□□□□ 0.27
TRAM1-204ENST00000521049 ARTNQ5T4W7 220 aa16.71■□□□□ 0.27
TRAM1-204ENST00000521049 GJB7Q6PEY0 223 aa16.71■□□□□ 0.27
TRAM1-204ENST00000521049 FOXR1Q6PIV2 292 aa16.71■□□□□ 0.27
TRAM1-204ENST00000521049 TRIM65Q6PJ69 517 aa16.71■□□□□ 0.27
TRAM1-204ENST00000521049 TFAP2DQ7Z6R9 452 aa16.71■□□□□ 0.27
TRAM1-204ENST00000521049 PASD1Q8IV76 773 aa16.71■□□□□ 0.27
TRAM1-204ENST00000521049 SHC3Q92529 594 aa16.71■□□□□ 0.27
TRAM1-204ENST00000521049 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.71■□□□□ 0.27
TRAM1-204ENST00000521049 SNX10Q9Y5X0 201 aa16.71■□□□□ 0.27
TRAM1-204ENST00000521049 LMO7DNF2Z398 122 aa16.7■□□□□ 0.26
TRAM1-204ENST00000521049 EFSO43281 561 aa16.7■□□□□ 0.26
TRAM1-204ENST00000521049 GCATO75600 419 aa16.7■□□□□ 0.26
TRAM1-204ENST00000521049 FGFR1OPO95684 399 aaKnown RBP16.7■□□□□ 0.26
TRAM1-204ENST00000521049 ITGA2BP08514 1039 aa16.7■□□□□ 0.26
TRAM1-204ENST00000521049 TFE3P19532 575 aaPredicted RBP16.7■□□□□ 0.26
TRAM1-204ENST00000521049 SLC9A1P19634 815 aa16.7■□□□□ 0.26
TRAM1-204ENST00000521049 KRT9P35527 623 aa16.7■□□□□ 0.26
TRAM1-204ENST00000521049 CSRP3P50461 194 aa16.7■□□□□ 0.26
TRAM1-204ENST00000521049 DNA2P51530 1060 aa16.7■□□□□ 0.26
TRAM1-204ENST00000521049 CCNHP51946 323 aaPredicted RBP16.7■□□□□ 0.26
TRAM1-204ENST00000521049 ADKP55263 362 aaKnown RBP16.7■□□□□ 0.26
TRAM1-204ENST00000521049 YPEL5P62699 121 aa16.7■□□□□ 0.26
TRAM1-204ENST00000521049 DEUP1Q05D60 604 aa16.7■□□□□ 0.26
TRAM1-204ENST00000521049 ZSCAN23Q3MJ62 389 aa16.7■□□□□ 0.26
TRAM1-204ENST00000521049 PTPN20Q4JDL3 420 aa16.7■□□□□ 0.26
TRAM1-204ENST00000521049 PRRT3Q5FWE3 981 aa16.7■□□□□ 0.26
TRAM1-204ENST00000521049 C6orf132Q5T0Z8 1188 aa16.7■□□□□ 0.26
TRAM1-204ENST00000521049 CRTC1Q6UUV9 634 aa16.7■□□□□ 0.26
TRAM1-204ENST00000521049 PARS2Q7L3T8 475 aaKnown RBP16.7■□□□□ 0.26
TRAM1-204ENST00000521049 SLC35F3Q8IY50 421 aa16.7■□□□□ 0.26
TRAM1-204ENST00000521049 ISG20Q96AZ6 181 aaKnown RBP16.7■□□□□ 0.26
TRAM1-204ENST00000521049 CENPTQ96BT3 561 aa16.7■□□□□ 0.26
TRAM1-204ENST00000521049 HAPLN3Q96S86 360 aa16.7■□□□□ 0.26
TRAM1-204ENST00000521049 CRACR2AQ9BSW2 395 aa16.7■□□□□ 0.26
TRAM1-204ENST00000521049 SYNCQ9H7C4 482 aa16.7■□□□□ 0.26
TRAM1-204ENST00000521049 HECAQ9UBI9 543 aaPredicted RBP16.7■□□□□ 0.26
TRAM1-204ENST00000521049 APEX2Q9UBZ4 518 aa16.7■□□□□ 0.26
TRAM1-204ENST00000521049 ZNF212Q9UDV6 495 aa16.7■□□□□ 0.26
TRAM1-204ENST00000521049 PADI4Q9UM07 663 aa16.7■□□□□ 0.26
TRAM1-204ENST00000521049 PMS2P1A4D2B8 440 aa16.69■□□□□ 0.26
TRAM1-204ENST00000521049 C16orf96A6NNT2 1141 aa16.69■□□□□ 0.26
TRAM1-204ENST00000521049 TMX2-CTNND1H3BSU7 103 aa16.69■□□□□ 0.26
TRAM1-204ENST00000521049 PYCARD-AS1I3L0S3 204 aa16.69■□□□□ 0.26
TRAM1-204ENST00000521049 NTN3O00634 580 aaPredicted RBP16.69■□□□□ 0.26
TRAM1-204ENST00000521049 NEMP1O14524 444 aa16.69■□□□□ 0.26
TRAM1-204ENST00000521049 TOR1BO14657 336 aa16.69■□□□□ 0.26
TRAM1-204ENST00000521049 YY2O15391 372 aa16.69■□□□□ 0.26
TRAM1-204ENST00000521049 SRGAP2O75044 1071 aa16.69■□□□□ 0.26
TRAM1-204ENST00000521049 ANXA6P08133 673 aa16.69■□□□□ 0.26
TRAM1-204ENST00000521049 SULT1E1P49888 294 aa16.69■□□□□ 0.26
TRAM1-204ENST00000521049 THOP1P52888 689 aa16.69■□□□□ 0.26
TRAM1-204ENST00000521049 RNASE9P60153 205 aaKnown RBP16.69■□□□□ 0.26
TRAM1-204ENST00000521049 ARF5P84085 180 aa16.69■□□□□ 0.26
TRAM1-204ENST00000521049 GNA12Q03113 381 aa16.69■□□□□ 0.26
TRAM1-204ENST00000521049 EIF3IQ13347 325 aaKnown RBP16.69■□□□□ 0.26
TRAM1-204ENST00000521049 MORC3Q14149 939 aa16.69■□□□□ 0.26
TRAM1-204ENST00000521049 SPIDRQ14159 915 aa16.69■□□□□ 0.26
TRAM1-204ENST00000521049 SLC25A52Q3SY17 297 aa16.69■□□□□ 0.26
TRAM1-204ENST00000521049 ESRP1Q6NXG1 681 aaKnown RBP16.69■□□□□ 0.26
TRAM1-204ENST00000521049 ARHGEF26Q96DR7 871 aa16.69■□□□□ 0.26
TRAM1-204ENST00000521049 LIN37Q96GY3 246 aaPredicted RBP16.69■□□□□ 0.26
TRAM1-204ENST00000521049 CCDC3Q9BQI4 270 aa16.69■□□□□ 0.26
TRAM1-204ENST00000521049 SLC13A1Q9BZW2 595 aa16.69■□□□□ 0.26
TRAM1-204ENST00000521049 ATP13A1Q9HD20 1204 aa16.69■□□□□ 0.26
TRAM1-204ENST00000521049 APOBEC3BQ9UH17 382 aaKnown RBP16.69■□□□□ 0.26
TRAM1-204ENST00000521049 ATXN7L1Q9ULK2 861 aaPredicted RBP16.69■□□□□ 0.26
TRAM1-204ENST00000521049 CTNND2Q9UQB3 1225 aa16.69■□□□□ 0.26
TRAM1-204ENST00000521049 PCDHGA7Q9Y5G6 932 aa16.69■□□□□ 0.26
TRAM1-204ENST00000521049 GJB6O95452 261 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms