RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 NSFP46459 744 aaKnown RBP15.43■□□□□ 0.06
CSMD1-207ENST00000520451 GEMIN4P57678 1058 aaKnown RBP15.43■□□□□ 0.06
CSMD1-207ENST00000520451 E2F1Q01094 437 aa15.43■□□□□ 0.06
CSMD1-207ENST00000520451 SGCGQ13326 291 aa15.43■□□□□ 0.06
CSMD1-207ENST00000520451 RTP5Q14D33 572 aa15.43■□□□□ 0.06
CSMD1-207ENST00000520451 ACAP1Q15027 740 aa15.43■□□□□ 0.06
CSMD1-207ENST00000520451 POLD3Q15054 466 aaPredicted RBP15.43■□□□□ 0.06
CSMD1-207ENST00000520451 LEKR1Q6ZMV7 388 aa15.43■□□□□ 0.06
CSMD1-207ENST00000520451 DCP2Q8IU60 420 aaKnown RBP15.43■□□□□ 0.06
CSMD1-207ENST00000520451 CCDC185Q8N715 623 aa15.43■□□□□ 0.06
CSMD1-207ENST00000520451 IFT43Q96FT9 208 aa15.43■□□□□ 0.06
CSMD1-207ENST00000520451 BMFQ96LC9 184 aa15.43■□□□□ 0.06
CSMD1-207ENST00000520451 PCDHB18PQ96TA0 734 aa15.43■□□□□ 0.06
CSMD1-207ENST00000520451 MAGEB5Q9BZ81 275 aa15.43■□□□□ 0.06
CSMD1-207ENST00000520451 MAGEH1Q9H213 219 aa15.43■□□□□ 0.06
CSMD1-207ENST00000520451 RETREG1Q9H6L5 497 aa15.43■□□□□ 0.06
CSMD1-207ENST00000520451 TMEM248Q9NWD8 314 aa15.43■□□□□ 0.06
CSMD1-207ENST00000520451 NLGN3Q9NZ94 848 aa15.43■□□□□ 0.06
CSMD1-207ENST00000520451 ADAM22Q9P0K1 906 aa15.43■□□□□ 0.06
CSMD1-207ENST00000520451 NEU3Q9UQ49 428 aa15.43■□□□□ 0.06
CSMD1-207ENST00000520451 FASNP49327 2511 aaKnown RBP15.43■□□□□ 0.06
CSMD1-207ENST00000520451 NEMP2A6NFY4 417 aa15.42■□□□□ 0.06
CSMD1-207ENST00000520451 IGLON5A6NGN9 336 aa15.42■□□□□ 0.06
CSMD1-207ENST00000520451 C16orf96A6NNT2 1141 aa15.42■□□□□ 0.06
CSMD1-207ENST00000520451 KRIT1O00522 736 aa15.42■□□□□ 0.06
CSMD1-207ENST00000520451 TLX3O43711 291 aaPredicted RBP15.42■□□□□ 0.06
CSMD1-207ENST00000520451 GSRP00390 522 aa15.42■□□□□ 0.06
CSMD1-207ENST00000520451 KRT3P12035 628 aa15.42■□□□□ 0.06
CSMD1-207ENST00000520451 CKMT1AP12532 417 aa15.42■□□□□ 0.06
CSMD1-207ENST00000520451 UNGP13051 313 aaPredicted RBP15.42■□□□□ 0.06
CSMD1-207ENST00000520451 ABL2P42684 1182 aa15.42■□□□□ 0.06
CSMD1-207ENST00000520451 HDAC4P56524 1084 aa15.42■□□□□ 0.06
CSMD1-207ENST00000520451 HNRNPKP61978 463 aaKnown RBP eCLIP15.42■□□□□ 0.06
CSMD1-207ENST00000520451 PTP4A2Q12974 167 aa15.42■□□□□ 0.06
CSMD1-207ENST00000520451 FZD2Q14332 565 aa15.42■□□□□ 0.06
CSMD1-207ENST00000520451 ZNF805Q5CZA5 627 aa15.42■□□□□ 0.06
CSMD1-207ENST00000520451 KDM7AQ6ZMT4 941 aa15.42■□□□□ 0.06
CSMD1-207ENST00000520451 LRRC69Q6ZNQ3 347 aa15.42■□□□□ 0.06
CSMD1-207ENST00000520451 ZSCAN30Q86W11 494 aa15.42■□□□□ 0.06
CSMD1-207ENST00000520451 ZNF354CQ86Y25 554 aa15.42■□□□□ 0.06
CSMD1-207ENST00000520451 PLPP6Q8IY26 295 aa15.42■□□□□ 0.06
CSMD1-207ENST00000520451 CACTIN-AS1Q8N1I8 211 aa15.42■□□□□ 0.06
CSMD1-207ENST00000520451 DCBLD1Q8N8Z6 715 aa15.42■□□□□ 0.06
CSMD1-207ENST00000520451 CENPIQ92674 756 aaPredicted RBP15.42■□□□□ 0.06
CSMD1-207ENST00000520451 RAB7BQ96AH8 199 aa15.42■□□□□ 0.06
CSMD1-207ENST00000520451 APOLD1Q96LR9 279 aa15.42■□□□□ 0.06
CSMD1-207ENST00000520451 PCMTD1Q96MG8 357 aaPredicted RBP15.42■□□□□ 0.06
CSMD1-207ENST00000520451 SELENOOQ9BVL4 669 aa15.42■□□□□ 0.06
CSMD1-207ENST00000520451 GPR27Q9NS67 375 aa15.42■□□□□ 0.06
CSMD1-207ENST00000520451 LMBRD1Q9NUN5 540 aa15.42■□□□□ 0.06
CSMD1-207ENST00000520451 FANCLQ9NW38 375 aa15.42■□□□□ 0.06
CSMD1-207ENST00000520451 GGT7Q9UJ14 662 aa15.42■□□□□ 0.06
CSMD1-207ENST00000520451 ITM2BQ9Y287 266 aa15.42■□□□□ 0.06
CSMD1-207ENST00000520451 SIK3Q9Y2K2 1263 aa15.42■□□□□ 0.06
CSMD1-207ENST00000520451 DAAM1Q9Y4D1 1078 aa15.42■□□□□ 0.06
CSMD1-207ENST00000520451 TRPM6Q9BX84 2022 aa15.42■□□□□ 0.06
CSMD1-207ENST00000520451 FPGTO14772 594 aa15.41■□□□□ 0.06
CSMD1-207ENST00000520451 SCAMP1O15126 338 aa15.41■□□□□ 0.06
CSMD1-207ENST00000520451 TSPAN6O43657 245 aa15.41■□□□□ 0.06
CSMD1-207ENST00000520451 BRINP1O60477 761 aa15.41■□□□□ 0.06
CSMD1-207ENST00000520451 NEBLO76041 1014 aa15.41■□□□□ 0.06
CSMD1-207ENST00000520451 MT-CO3P00414 261 aa15.41■□□□□ 0.06
CSMD1-207ENST00000520451 CALB1P05937 261 aa15.41■□□□□ 0.06
CSMD1-207ENST00000520451 UGT2B4P06133 528 aa15.41■□□□□ 0.06
CSMD1-207ENST00000520451 GIMD1P0DJR0 217 aa15.41■□□□□ 0.06
CSMD1-207ENST00000520451 MYF5P13349 255 aa15.41■□□□□ 0.06
CSMD1-207ENST00000520451 GPD1P21695 349 aa15.41■□□□□ 0.06
CSMD1-207ENST00000520451 ITPKBP27987 946 aa15.41■□□□□ 0.06
CSMD1-207ENST00000520451 RFC1P35251 1148 aaPredicted RBP15.41■□□□□ 0.06
CSMD1-207ENST00000520451 EIF2S3P41091 472 aaKnown RBP15.41■□□□□ 0.06
CSMD1-207ENST00000520451 RABIFP47224 123 aa15.41■□□□□ 0.06
CSMD1-207ENST00000520451 COPB1P53618 953 aaKnown RBP15.41■□□□□ 0.06
CSMD1-207ENST00000520451 SNRPD1P62314 119 aaKnown RBP15.41■□□□□ 0.06
CSMD1-207ENST00000520451 SYCP1Q15431 976 aa15.41■□□□□ 0.06
CSMD1-207ENST00000520451 CLEC16AQ2KHT3 1053 aa15.41■□□□□ 0.06
CSMD1-207ENST00000520451 ATXN7L2Q5T6C5 722 aaPredicted RBP15.41■□□□□ 0.06
CSMD1-207ENST00000520451 PARGQ86W56 976 aa15.41■□□□□ 0.06
CSMD1-207ENST00000520451 ZNF548Q8NEK5 533 aaPredicted RBP15.41■□□□□ 0.06
CSMD1-207ENST00000520451 NEK11Q8NG66 645 aa15.41■□□□□ 0.06
CSMD1-207ENST00000520451 OR2AP1Q8NGE2 309 aa15.41■□□□□ 0.06
CSMD1-207ENST00000520451 NTAN1Q96AB6 310 aa15.41■□□□□ 0.06
CSMD1-207ENST00000520451 C1QTNF2Q9BXJ5 285 aa15.41■□□□□ 0.06
CSMD1-207ENST00000520451 SEPT11Q9NVA2 429 aaKnown RBP15.41■□□□□ 0.06
CSMD1-207ENST00000520451 IPO11Q9UI26 975 aaKnown RBP15.41■□□□□ 0.06
CSMD1-207ENST00000520451 SPTY2D1-AS1A0A0U1RR47 76 aa15.4■□□□□ 0.06
CSMD1-207ENST00000520451 H3BM21 787 aa15.4■□□□□ 0.06
CSMD1-207ENST00000520451 K7ESM1 405 aa15.4■□□□□ 0.06
CSMD1-207ENST00000520451 RRP8O43159 456 aaKnown RBP15.4■□□□□ 0.06
CSMD1-207ENST00000520451 BUB1O43683 1085 aa15.4■□□□□ 0.06
CSMD1-207ENST00000520451 KDELR3O43731 214 aa15.4■□□□□ 0.06
CSMD1-207ENST00000520451 TMCC1O94876 653 aa15.4■□□□□ 0.06
CSMD1-207ENST00000520451 POP4O95707 220 aaKnown RBP15.4■□□□□ 0.06
CSMD1-207ENST00000520451 CSF2P04141 144 aa15.4■□□□□ 0.06
CSMD1-207ENST00000520451 NME1P15531 152 aaKnown RBP15.4■□□□□ 0.06
CSMD1-207ENST00000520451 GSCP56915 257 aaPredicted RBP15.4■□□□□ 0.06
CSMD1-207ENST00000520451 PDE1CQ14123 709 aaPredicted RBP15.4■□□□□ 0.06
CSMD1-207ENST00000520451 MYLK3Q32MK0 819 aa15.4■□□□□ 0.06
CSMD1-207ENST00000520451 WDR59Q6PJI9 974 aa15.4■□□□□ 0.06
CSMD1-207ENST00000520451 SLFN11Q7Z7L1 901 aa15.4■□□□□ 0.06
CSMD1-207ENST00000520451 PHF13Q86YI8 300 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms