RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 SERPINC1P01008 464 aa16.4■□□□□ 0.22
IGHV3-42-201ENST00000520410 ALPPL2P10696 532 aa16.4■□□□□ 0.22
IGHV3-42-201ENST00000520410 RXRGP48443 463 aa16.4■□□□□ 0.22
IGHV3-42-201ENST00000520410 CYP4F3Q08477 520 aa16.4■□□□□ 0.22
IGHV3-42-201ENST00000520410 HES3Q5TGS1 186 aa16.4■□□□□ 0.22
IGHV3-42-201ENST00000520410 GCNT7Q6ZNI0 430 aa16.4■□□□□ 0.22
IGHV3-42-201ENST00000520410 Q6ZSR6 202 aa16.4■□□□□ 0.22
IGHV3-42-201ENST00000520410 MCOLN2Q8IZK6 566 aa16.4■□□□□ 0.22
IGHV3-42-201ENST00000520410 RTL3Q8N8U3 475 aaKnown RBP16.4■□□□□ 0.22
IGHV3-42-201ENST00000520410 CENPIQ92674 756 aaPredicted RBP16.4■□□□□ 0.22
IGHV3-42-201ENST00000520410 EXOC2Q96KP1 924 aa16.4■□□□□ 0.22
IGHV3-42-201ENST00000520410 CNPY3Q9BT09 278 aa16.4■□□□□ 0.22
IGHV3-42-201ENST00000520410 FZD10Q9ULW2 581 aa16.4■□□□□ 0.22
IGHV3-42-201ENST00000520410 FADS3Q9Y5Q0 445 aa16.4■□□□□ 0.22
IGHV3-42-201ENST00000520410 IGLON5A6NGN9 336 aa16.39■□□□□ 0.21
IGHV3-42-201ENST00000520410 RASA4BC9J798 803 aa16.39■□□□□ 0.21
IGHV3-42-201ENST00000520410 RASA4O43374 803 aa16.39■□□□□ 0.21
IGHV3-42-201ENST00000520410 POP4O95707 220 aaKnown RBP16.39■□□□□ 0.21
IGHV3-42-201ENST00000520410 ABL2P42684 1182 aa16.39■□□□□ 0.21
IGHV3-42-201ENST00000520410 ACADVLP49748 655 aa16.39■□□□□ 0.21
IGHV3-42-201ENST00000520410 TPM4P67936 248 aa16.39■□□□□ 0.21
IGHV3-42-201ENST00000520410 MYLK3Q32MK0 819 aa16.39■□□□□ 0.21
IGHV3-42-201ENST00000520410 ZNF805Q5CZA5 627 aa16.39■□□□□ 0.21
IGHV3-42-201ENST00000520410 SFMBT2Q5VUG0 894 aa16.39■□□□□ 0.21
IGHV3-42-201ENST00000520410 PPP1R2P3Q6NXS1 205 aa16.39■□□□□ 0.21
IGHV3-42-201ENST00000520410 GDPD4Q6W3E5 623 aa16.39■□□□□ 0.21
IGHV3-42-201ENST00000520410 TTC7BQ86TV6 843 aa16.39■□□□□ 0.21
IGHV3-42-201ENST00000520410 TMEM145Q8NBT3 493 aa16.39■□□□□ 0.21
IGHV3-42-201ENST00000520410 CXorf40AQ8TE69 158 aa16.39■□□□□ 0.21
IGHV3-42-201ENST00000520410 ISG20Q96AZ6 181 aaKnown RBP16.39■□□□□ 0.21
IGHV3-42-201ENST00000520410 HMCESQ96FZ2 354 aa16.39■□□□□ 0.21
IGHV3-42-201ENST00000520410 DCBLD2Q96PD2 775 aa16.39■□□□□ 0.21
IGHV3-42-201ENST00000520410 OSBPL1AQ9BXW6 950 aa16.39■□□□□ 0.21
IGHV3-42-201ENST00000520410 DHX35Q9H5Z1 703 aaKnown RBP16.39■□□□□ 0.21
IGHV3-42-201ENST00000520410 RETREG1Q9H6L5 497 aa16.39■□□□□ 0.21
IGHV3-42-201ENST00000520410 PARVAQ9NVD7 372 aa16.39■□□□□ 0.21
IGHV3-42-201ENST00000520410 TAS2R14Q9NYV8 317 aa16.39■□□□□ 0.21
IGHV3-42-201ENST00000520410 MYO1AQ9UBC5 1043 aa16.39■□□□□ 0.21
IGHV3-42-201ENST00000520410 PCSK1NQ9UHG2 260 aa16.39■□□□□ 0.21
IGHV3-42-201ENST00000520410 GGT7Q9UJ14 662 aa16.39■□□□□ 0.21
IGHV3-42-201ENST00000520410 AP4E1Q9UPM8 1137 aa16.39■□□□□ 0.21
IGHV3-42-201ENST00000520410 RAXQ9Y2V3 346 aa16.39■□□□□ 0.21
IGHV3-42-201ENST00000520410 PCDHGA1Q9Y5H4 931 aa16.39■□□□□ 0.21
IGHV3-42-201ENST00000520410 AK5Q9Y6K8 562 aa16.39■□□□□ 0.21
IGHV3-42-201ENST00000520410 C10orf142B7Z368 130 aa16.38■□□□□ 0.21
IGHV3-42-201ENST00000520410 H3BM21 787 aa16.38■□□□□ 0.21
IGHV3-42-201ENST00000520410 EEF2KO00418 725 aaKnown RBP16.38■□□□□ 0.21
IGHV3-42-201ENST00000520410 FGF10O15520 208 aaPredicted RBP16.38■□□□□ 0.21
IGHV3-42-201ENST00000520410 TSPAN6O43657 245 aa16.38■□□□□ 0.21
IGHV3-42-201ENST00000520410 SIGLEC6O43699 453 aa16.38■□□□□ 0.21
IGHV3-42-201ENST00000520410 RNF8O76064 485 aa16.38■□□□□ 0.21
IGHV3-42-201ENST00000520410 CD160O95971 181 aa16.38■□□□□ 0.21
IGHV3-42-201ENST00000520410 CKMT2P17540 419 aa16.38■□□□□ 0.21
IGHV3-42-201ENST00000520410 ZNF165P49910 485 aa16.38■□□□□ 0.21
IGHV3-42-201ENST00000520410 PDE1CQ14123 709 aaPredicted RBP16.38■□□□□ 0.21
IGHV3-42-201ENST00000520410 SMAD1Q15797 465 aaKnown RBP16.38■□□□□ 0.21
IGHV3-42-201ENST00000520410 TDRD12Q587J7 1177 aaKnown RBP16.38■□□□□ 0.21
IGHV3-42-201ENST00000520410 APTXQ7Z2E3 356 aaKnown RBP16.38■□□□□ 0.21
IGHV3-42-201ENST00000520410 TMPRSS12Q86WS5 348 aa16.38■□□□□ 0.21
IGHV3-42-201ENST00000520410 DNAAF5Q86Y56 855 aa16.38■□□□□ 0.21
IGHV3-42-201ENST00000520410 RAB7BQ96AH8 199 aa16.38■□□□□ 0.21
IGHV3-42-201ENST00000520410 ZNF653Q96CK0 615 aa16.38■□□□□ 0.21
IGHV3-42-201ENST00000520410 ARHGEF26Q96DR7 871 aa16.38■□□□□ 0.21
IGHV3-42-201ENST00000520410 CELF6Q96J87 481 aaKnown RBP16.38■□□□□ 0.21
IGHV3-42-201ENST00000520410 LRIG1Q96JA1 1093 aa16.38■□□□□ 0.21
IGHV3-42-201ENST00000520410 HSD3B7Q9H2F3 369 aa16.38■□□□□ 0.21
IGHV3-42-201ENST00000520410 HAUS4Q9H6D7 363 aa16.38■□□□□ 0.21
IGHV3-42-201ENST00000520410 KLHL11Q9NVR0 708 aa16.38■□□□□ 0.21
IGHV3-42-201ENST00000520410 UCKL1Q9NWZ5 548 aa16.38■□□□□ 0.21
IGHV3-42-201ENST00000520410 UBA2Q9UBT2 640 aaPredicted RBP16.38■□□□□ 0.21
IGHV3-42-201ENST00000520410 NEU3Q9UQ49 428 aa16.38■□□□□ 0.21
IGHV3-42-201ENST00000520410 EPG5Q9HCE0 2579 aa16.37■□□□□ 0.21
IGHV3-42-201ENST00000520410 KMT2BQ9UMN6 2715 aaPredicted RBP16.37■□□□□ 0.21
IGHV3-42-201ENST00000520410 LRRC10BA6NIK2 292 aa16.37■□□□□ 0.21
IGHV3-42-201ENST00000520410 TAF4O00268 1085 aa16.37■□□□□ 0.21
IGHV3-42-201ENST00000520410 DKK1O94907 266 aa16.37■□□□□ 0.21
IGHV3-42-201ENST00000520410 CDK4P11802 303 aa16.37■□□□□ 0.21
IGHV3-42-201ENST00000520410 DGKAP23743 735 aa16.37■□□□□ 0.21
IGHV3-42-201ENST00000520410 THOP1P52888 689 aa16.37■□□□□ 0.21
IGHV3-42-201ENST00000520410 AIF1P55008 147 aa16.37■□□□□ 0.21
IGHV3-42-201ENST00000520410 KLHL30Q0D2K2 578 aa16.37■□□□□ 0.21
IGHV3-42-201ENST00000520410 PARP15Q460N3 678 aa16.37■□□□□ 0.21
IGHV3-42-201ENST00000520410 TMEM259Q4ZIN3 620 aa16.37■□□□□ 0.21
IGHV3-42-201ENST00000520410 PPP6R3Q5H9R7 873 aaPredicted RBP16.37■□□□□ 0.21
IGHV3-42-201ENST00000520410 ARTNQ5T4W7 220 aa16.37■□□□□ 0.21
IGHV3-42-201ENST00000520410 KYAT3Q6YP21 454 aaKnown RBP16.37■□□□□ 0.21
IGHV3-42-201ENST00000520410 VPS36Q86VN1 386 aa16.37■□□□□ 0.21
IGHV3-42-201ENST00000520410 PDCD7Q8N8D1 485 aaKnown RBP16.37■□□□□ 0.21
IGHV3-42-201ENST00000520410 HNRNPLLQ8WVV9 542 aaKnown RBP16.37■□□□□ 0.21
IGHV3-42-201ENST00000520410 NXPE2Q96DL1 559 aa16.37■□□□□ 0.21
IGHV3-42-201ENST00000520410 WRAP53Q9BUR4 548 aaKnown RBP16.37■□□□□ 0.21
IGHV3-42-201ENST00000520410 TTYH3Q9C0H2 523 aa16.37■□□□□ 0.21
IGHV3-42-201ENST00000520410 RTN4Q9NQC3 1192 aaKnown RBP16.37■□□□□ 0.21
IGHV3-42-201ENST00000520410 EVA1BQ9NVM1 165 aa16.37■□□□□ 0.21
IGHV3-42-201ENST00000520410 DOCK4Q8N1I0 1966 aa16.37■□□□□ 0.21
IGHV3-42-201ENST00000520410 COL5A1P20908 1838 aaPredicted RBP16.36■□□□□ 0.21
IGHV3-42-201ENST00000520410 POM121BA6NF01 834 aa16.36■□□□□ 0.21
IGHV3-42-201ENST00000520410 NEMP2A6NFY4 417 aa16.36■□□□□ 0.21
IGHV3-42-201ENST00000520410 DFFAO00273 331 aa16.36■□□□□ 0.21
IGHV3-42-201ENST00000520410 TRIM38O00635 465 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms