RNA–Protein interactions for RNA: ENST00000517256.1

SNORA40.17-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 115 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.17-201ENST00000517256 METTL16Q86W50 562 aaKnown RBP-0.07□□□□□ -2.42
SNORA40.17-201ENST00000517256 CALHM3Q86XJ0 350 aa-0.07□□□□□ -2.42
SNORA40.17-201ENST00000517256 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP-0.07□□□□□ -2.42
SNORA40.17-201ENST00000517256 C11orf42Q8N5U0 333 aa-0.07□□□□□ -2.42
SNORA40.17-201ENST00000517256 Q8N9L7 120 aa-0.07□□□□□ -2.42
SNORA40.17-201ENST00000517256 ZSWIM2Q8NEG5 633 aa-0.07□□□□□ -2.42
SNORA40.17-201ENST00000517256 GJA10Q969M2 543 aa-0.07□□□□□ -2.42
SNORA40.17-201ENST00000517256 P2RY11Q96G91 374 aa-0.07□□□□□ -2.42
SNORA40.17-201ENST00000517256 GPR78Q96P69 363 aa-0.07□□□□□ -2.42
SNORA40.17-201ENST00000517256 SLC2A13Q96QE2 648 aa-0.07□□□□□ -2.42
SNORA40.17-201ENST00000517256 NPAS1Q99742 590 aa-0.07□□□□□ -2.42
SNORA40.17-201ENST00000517256 ARID3AQ99856 593 aa-0.07□□□□□ -2.42
SNORA40.17-201ENST00000517256 POLR3CQ9BUI4 534 aaPredicted RBP-0.07□□□□□ -2.42
SNORA40.17-201ENST00000517256 DGCR6LQ9BY27 220 aa-0.07□□□□□ -2.42
SNORA40.17-201ENST00000517256 LHPPQ9H008 270 aa-0.07□□□□□ -2.42
SNORA40.17-201ENST00000517256 ACBD3Q9H3P7 528 aa-0.07□□□□□ -2.42
SNORA40.17-201ENST00000517256 FKRPQ9H9S5 495 aa-0.07□□□□□ -2.42
SNORA40.17-201ENST00000517256 SAP30LQ9HAJ7 183 aa-0.07□□□□□ -2.42
SNORA40.17-201ENST00000517256 PPANQ9NQ55 473 aaKnown RBP-0.07□□□□□ -2.42
SNORA40.17-201ENST00000517256 TRIM36Q9NQ86 728 aa-0.07□□□□□ -2.42
SNORA40.17-201ENST00000517256 NIPSNAP3AQ9UFN0 247 aaPredicted RBP-0.07□□□□□ -2.42
SNORA40.17-201ENST00000517256 CDH22Q9UJ99 828 aa-0.07□□□□□ -2.42
SNORA40.17-201ENST00000517256 ZNF180Q9UJW8 692 aa-0.07□□□□□ -2.42
SNORA40.17-201ENST00000517256 PLCL2Q9UPR0 1127 aa-0.07□□□□□ -2.42
SNORA40.17-201ENST00000517256 SAMHD1Q9Y3Z3 626 aaKnown RBP-0.07□□□□□ -2.42
SNORA40.17-201ENST00000517256 JRKLQ9Y4A0 524 aa-0.07□□□□□ -2.42
SNORA40.17-201ENST00000517256 PCDHA3Q9Y5H8 950 aa-0.07□□□□□ -2.42
SNORA40.17-201ENST00000517256 PSAT1Q9Y617 370 aa-0.07□□□□□ -2.42
SNORA40.17-201ENST00000517256 SPATA31A5Q5VU36 1347 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 SPATA31A7Q8IWB4 1347 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 TDRD6O60522 2096 aaKnown RBP-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 DUXAA6NLW8 204 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 PLD2O14939 933 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 SGTAO43765 313 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 NEURL1O76050 574 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 SOX30O94993 753 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 SGPL1O95470 568 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 ERVK-10P10266 1014 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 GNLYP22749 145 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 GDF1P27539 372 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 WNT5AP41221 380 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 STAT6P42226 847 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 AGTR2P50052 363 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 AGFG1P52594 562 aaKnown RBP-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 UCP3P55916 312 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 SNX16P57768 344 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 PPARDQ03181 441 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 PAX8Q06710 450 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 TCF15Q12870 199 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 GAB1Q13480 694 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 IL10RAQ13651 578 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 UBE4AQ14139 1066 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 ELF2Q15723 593 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 SETMARQ53H47 684 aaPredicted RBP-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 ARL13AQ5H913 290 aaPredicted RBP-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 ADAMTSL4-AS1Q5T5F5 129 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 TMEM71Q6P5X7 295 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 TTC7BQ86TV6 843 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 DDX42Q86XP3 938 aaKnown RBP eCLIP-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 KMT5CQ86Y97 462 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 ODF3L1Q8IXM7 274 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 SLC15A4Q8N697 577 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 KDM1BQ8NB78 822 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 SMC1BQ8NDV3 1235 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 SMCR8Q8TEV9 937 aaPredicted RBP-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 KAT5Q92993 513 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 PRR11Q96HE9 360 aaPredicted RBP-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 ADAD1Q96M93 576 aaKnown RBP-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 TRAPPC9Q96Q05 1148 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 HIST1H2AAQ96QV6 131 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 GAL3ST4Q96RP7 486 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 PSMB7Q99436 277 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 EIF3CQ99613 913 aaKnown RBP-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 MXD3Q9BW11 206 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 MS4A7Q9GZW8 240 aaPredicted RBP-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 PNNQ9H307 717 aaKnown RBP-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 KLHL31Q9H511 634 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 WDCPQ9H6R7 721 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 ACTR5Q9H9F9 607 aaPredicted RBP-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 MYNNQ9NPC7 610 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 ZNF446Q9NWS9 450 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 HCFC1R1Q9NWW0 138 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 PRODH2Q9UF12 536 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 ABCF2Q9UG63 623 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 ASIC3Q9UHC3 531 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 GTF3C4Q9UKN8 822 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 KCNJ14Q9UNX9 436 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 PYGO1Q9Y3Y4 419 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 PCDHA1Q9Y5I3 950 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 PCNX3Q9H6A9 2034 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 NID2Q14112 1375 aa-0.08□□□□□ -2.42
SNORA40.17-201ENST00000517256 TNKSO95271 1327 aa-0.09□□□□□ -2.42
SNORA40.17-201ENST00000517256 SSPOA2VEC9 5147 aa-0.09□□□□□ -2.42
SNORA40.17-201ENST00000517256 IGLV3-16A0A075B6K0 115 aa-0.09□□□□□ -2.42
SNORA40.17-201ENST00000517256 IGKV2D-24A0A075B6R9 120 aa-0.09□□□□□ -2.42
SNORA40.17-201ENST00000517256 A0A087WUV0 522 aaPredicted RBP-0.09□□□□□ -2.42
SNORA40.17-201ENST00000517256 SPRR5A0A1B0GTR4 108 aa-0.09□□□□□ -2.42
SNORA40.17-201ENST00000517256 WI2-2373I1.2A0A1W2PRP0 233 aa-0.09□□□□□ -2.42
SNORA40.17-201ENST00000517256 TIMM23O14925 209 aa-0.09□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms