RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 ALG14Q96F25 216 aa5.5□□□□□ -1.53
SCARNA20.4-201ENST00000516969 CERS2Q96G23 380 aa5.5□□□□□ -1.53
SCARNA20.4-201ENST00000516969 FEM1CQ96JP0 617 aa5.5□□□□□ -1.53
SCARNA20.4-201ENST00000516969 NSMCE3Q96MG7 304 aa5.5□□□□□ -1.53
SCARNA20.4-201ENST00000516969 ZNF778Q96MU6 729 aa5.5□□□□□ -1.53
SCARNA20.4-201ENST00000516969 PSKH2Q96QS6 385 aa5.5□□□□□ -1.53
SCARNA20.4-201ENST00000516969 RANBP9Q96S59 729 aa5.5□□□□□ -1.53
SCARNA20.4-201ENST00000516969 CPNE1Q99829 537 aa5.5□□□□□ -1.53
SCARNA20.4-201ENST00000516969 C17orf80Q9BSJ5 609 aa5.5□□□□□ -1.53
SCARNA20.4-201ENST00000516969 FEM1AQ9BSK4 669 aa5.5□□□□□ -1.53
SCARNA20.4-201ENST00000516969 SLC46A2Q9BY10 475 aa5.5□□□□□ -1.53
SCARNA20.4-201ENST00000516969 VPS11Q9H270 941 aa5.5□□□□□ -1.53
SCARNA20.4-201ENST00000516969 MTIF3Q9H2K0 278 aaKnown RBP5.5□□□□□ -1.53
SCARNA20.4-201ENST00000516969 TRPC7Q9HCX4 862 aa5.5□□□□□ -1.53
SCARNA20.4-201ENST00000516969 TREX1Q9NSU2 369 aa5.5□□□□□ -1.53
SCARNA20.4-201ENST00000516969 MKS1Q9NXB0 559 aa5.5□□□□□ -1.53
SCARNA20.4-201ENST00000516969 SMPD4Q9NXE4 827 aa5.5□□□□□ -1.53
SCARNA20.4-201ENST00000516969 DNMT3BQ9UBC3 853 aaKnown RBP5.5□□□□□ -1.53
SCARNA20.4-201ENST00000516969 SEPT3Q9UH03 358 aa5.5□□□□□ -1.53
SCARNA20.4-201ENST00000516969 GGA2Q9UJY4 613 aa5.5□□□□□ -1.53
SCARNA20.4-201ENST00000516969 GRID1Q9ULK0 1009 aa5.5□□□□□ -1.53
SCARNA20.4-201ENST00000516969 ARHGAP26Q9UNA1 814 aa5.5□□□□□ -1.53
SCARNA20.4-201ENST00000516969 PLLPQ9Y342 182 aa5.5□□□□□ -1.53
SCARNA20.4-201ENST00000516969 PSAT1Q9Y617 370 aa5.5□□□□□ -1.53
SCARNA20.4-201ENST00000516969 CPQQ9Y646 472 aa5.5□□□□□ -1.53
SCARNA20.4-201ENST00000516969 LAMA3Q16787 3333 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 NUP210Q8TEM1 1887 aaPredicted RBP5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 CXorf51AA0A1B0GTR3 108 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 A0A1W2PRU2 124 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 E2F8A0AVK6 867 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 TTC24A2A3L6 582 aaPredicted RBP5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 ERICH4A6NGS2 130 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 TCP11X1B4DZS4 312 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 GOLGA8RI6L899 631 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 LEFTY2O00292 366 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 TSPAN3O60637 253 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 LPXNO60711 386 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 TBL1XO60907 577 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 GJB3O75712 270 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 LUC7L3O95232 432 aaKnown RBP5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 PAPSS2O95340 614 aaPredicted RBP5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 ALDOAP04075 364 aaKnown RBP5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 RHOCP08134 193 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 ITGA2BP08514 1039 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 HNRNPA1P09651 372 aaKnown RBP eCLIP5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 ATXN1LP0C7T5 689 aaKnown RBP5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 TCF3P15923 654 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 PTPN2P17706 415 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 GLDCP23378 1020 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 PSMA3P25788 255 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 GBP2P32456 591 aaPredicted RBP5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 CRHR1P34998 444 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 CA8P35219 290 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 IRS1P35568 1242 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 GP5P40197 560 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 CHRNA4P43681 627 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 CCT5P48643 541 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 SERPINH1P50454 418 aaKnown RBP5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 CSRP3P50461 194 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 PLK1P53350 603 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 CSE1LP55060 971 aaKnown RBP5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 HNRNPH2P55795 449 aaKnown RBP5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 OXCT1P55809 520 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 ERVK-21P61565 698 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 ARF5P84085 180 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 ITKQ08881 620 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 NSUN2Q08J23 767 aaKnown RBP eCLIP5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 POU6F1Q14863 301 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 PDK4Q16654 411 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 INO80DQ53TQ3 878 aaPredicted RBP5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 FSCBQ5H9T9 825 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 SIRPB2Q5JXA9 342 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 PRSS36Q5K4E3 855 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 STXBP5Q5T5C0 1151 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 MROH9Q5TGP6 573 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 FYB2Q5VWT5 728 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 RNF219Q5W0B1 726 aaPredicted RBP5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 PDPK2PQ6A1A2 396 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 IL31Q6EBC2 164 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 ESRP1Q6NXG1 681 aaKnown RBP5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 LVRNQ6Q4G3 990 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 C6orf89Q6UWU4 347 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 CDHR3Q6ZTQ4 885 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 SPRED2Q7Z698 418 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 KCNMB4Q86W47 210 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 RASSF3Q86WH2 238 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 ZNF354CQ86Y25 554 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 LRRC34Q8IZ02 419 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 CMTM8Q8IZV2 173 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 LEMD2Q8NC56 503 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 GDAP1Q8TB36 358 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 SHKBP1Q8TBC3 707 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 WFDC5Q8TCV5 224 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 MGARPQ8TDB4 240 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 ZNF669Q96BR6 464 aaPredicted RBP5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 TCEAL4Q96EI5 215 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 APOPT1Q96IL0 206 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 SEC16BQ96JE7 1060 aa5.49□□□□□ -1.53
SCARNA20.4-201ENST00000516969 LMLNQ96KR4 655 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms