RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 ADCK5Q3MIX3 580 aa3.47□□□□□ -1.85
HERC4-215ENST00000515753 ZNF484Q5JVG2 852 aa3.47□□□□□ -1.85
HERC4-215ENST00000515753 KRTAP5-4Q6L8H1 288 aa3.47□□□□□ -1.85
HERC4-215ENST00000515753 SYT13Q7L8C5 426 aa3.47□□□□□ -1.85
HERC4-215ENST00000515753 MOGAT3Q86VF5 341 aa3.47□□□□□ -1.85
HERC4-215ENST00000515753 NR2C2APQ86WQ0 139 aa3.47□□□□□ -1.85
HERC4-215ENST00000515753 CCDC25Q86WR0 208 aa3.47□□□□□ -1.85
HERC4-215ENST00000515753 CAMK1DQ8IU85 385 aa3.47□□□□□ -1.85
HERC4-215ENST00000515753 BRSK2Q8IWQ3 736 aa3.47□□□□□ -1.85
HERC4-215ENST00000515753 DPP10Q8N608 796 aa3.47□□□□□ -1.85
HERC4-215ENST00000515753 TMEM217Q8N7C4 229 aa3.47□□□□□ -1.85
HERC4-215ENST00000515753 USP38Q8NB14 1042 aa3.47□□□□□ -1.85
HERC4-215ENST00000515753 GABPB2Q8TAK5 448 aaPredicted RBP3.47□□□□□ -1.85
HERC4-215ENST00000515753 FAR1Q8WVX9 515 aa3.47□□□□□ -1.85
HERC4-215ENST00000515753 HDAC2Q92769 488 aaKnown RBP3.47□□□□□ -1.85
HERC4-215ENST00000515753 NEUROG1Q92886 237 aa3.47□□□□□ -1.85
HERC4-215ENST00000515753 ERP27Q96DN0 273 aa3.47□□□□□ -1.85
HERC4-215ENST00000515753 ZBTB10Q96DT7 871 aa3.47□□□□□ -1.85
HERC4-215ENST00000515753 ZNF333Q96JL9 665 aa3.47□□□□□ -1.85
HERC4-215ENST00000515753 WDR77Q9BQA1 342 aaPredicted RBP3.47□□□□□ -1.85
HERC4-215ENST00000515753 HERC2P3Q9BVR0 1158 aa3.47□□□□□ -1.85
HERC4-215ENST00000515753 SLC26A6Q9BXS9 759 aa3.47□□□□□ -1.85
HERC4-215ENST00000515753 CADM1Q9BY67 442 aaKnown RBP3.47□□□□□ -1.85
HERC4-215ENST00000515753 B3GNT4Q9C0J1 378 aa3.47□□□□□ -1.85
HERC4-215ENST00000515753 CLPBQ9H078 707 aa3.47□□□□□ -1.85
HERC4-215ENST00000515753 RBM38Q9H0Z9 239 aaKnown RBP3.47□□□□□ -1.85
HERC4-215ENST00000515753 WASH6PQ9NQA3 447 aa3.47□□□□□ -1.85
HERC4-215ENST00000515753 THAP1Q9NVV9 213 aa3.47□□□□□ -1.85
HERC4-215ENST00000515753 CLIC5Q9NZA1 410 aa3.47□□□□□ -1.85
HERC4-215ENST00000515753 DERAQ9Y315 318 aa3.47□□□□□ -1.85
HERC4-215ENST00000515753 CUX1P39880 1505 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 TCRBV7S3A2A0A539 114 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 C17orf102A2RUQ5 167 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 CLEC18AA5D8T8 446 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 PRSS47A8MTI9 375 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 CCER2I3L3R5 266 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 K7ENM7 598 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 EYA2O00167 538 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 RNMTO43148 476 aaKnown RBP3.46□□□□□ -1.86
HERC4-215ENST00000515753 FIBPO43427 364 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 KIF1CO43896 1103 aaKnown RBP3.46□□□□□ -1.86
HERC4-215ENST00000515753 TMCC1O94876 653 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 DDX58O95786 925 aaKnown RBP3.46□□□□□ -1.86
HERC4-215ENST00000515753 CNPP09543 421 aaKnown RBP3.46□□□□□ -1.86
HERC4-215ENST00000515753 LYL1P12980 280 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 ARSBP15848 533 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 XBP1P17861 261 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 KRTAP5-9P26371 169 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 ELF1P32519 619 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 KRT9P35527 623 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 AARSP49588 968 aaKnown RBP eCLIP3.46□□□□□ -1.86
HERC4-215ENST00000515753 CLCNKBP51801 687 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 RBM5P52756 815 aaKnown RBP eCLIP3.46□□□□□ -1.86
HERC4-215ENST00000515753 ZP1P60852 638 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 ROR2Q01974 943 aaKnown RBP3.46□□□□□ -1.86
HERC4-215ENST00000515753 PRKG2Q13237 762 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 G3BP1Q13283 466 aaKnown RBP eCLIP3.46□□□□□ -1.86
HERC4-215ENST00000515753 CUL4BQ13620 913 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 TIGD6Q17RP2 521 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 CTXN3Q4LDR2 81 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 FBXO47Q5MNV8 452 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 TBC1D9BQ66K14 1250 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 CAPRIN2Q6IMN6 1127 aaKnown RBP3.46□□□□□ -1.86
HERC4-215ENST00000515753 HMBOX1Q6NT76 420 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 DENND1BQ6P3S1 775 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 PDXDC1Q6P996 788 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 GJB7Q6PEY0 223 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 DSTYKQ6XUX3 929 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 C4orf50Q6ZRC1 276 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 BRINP3Q76B58 766 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 RNF144BQ7Z419 303 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 HERC6Q8IVU3 1022 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 VPS52Q8N1B4 723 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 CLEC18CQ8NCF0 446 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 C7orf57Q8NEG2 295 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 ENGASEQ8NFI3 743 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 GOLGA1Q92805 767 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 KCNJ9Q92806 393 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 ZNF419Q96HQ0 510 aaPredicted RBP3.46□□□□□ -1.86
HERC4-215ENST00000515753 URB1-AS1Q96HZ7 61 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 IFT27Q9BW83 186 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 KRTAP4-4Q9BYR3 166 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.46□□□□□ -1.86
HERC4-215ENST00000515753 PLAC1Q9HBJ0 212 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 ITM2CQ9NQX7 267 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 TBC1D22BQ9NU19 505 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 PLK2Q9NYY3 685 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 SELENONQ9NZV5 590 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 FEM1BQ9UK73 627 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 PCDHA7Q9UN72 937 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 CLDN16Q9Y5I7 305 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 ABCC10Q5T3U5 1492 aa3.46□□□□□ -1.86
HERC4-215ENST00000515753 ERICH3Q5RHP9 1530 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 H0YGN5 161 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 TNFRSF13BO14836 293 aaPredicted RBP3.45□□□□□ -1.86
HERC4-215ENST00000515753 SYN3O14994 580 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 SPRY3O43610 288 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 MMP3P08254 477 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 FCGR2AP12318 317 aa3.45□□□□□ -1.86
HERC4-215ENST00000515753 CHRNB2P17787 502 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms