RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 FAXCQ5TGI0 409 aa10.7□□□□□ -0.7
CLDND1-231ENST00000515620 TCERG1LQ5VWI1 586 aa10.7□□□□□ -0.7
CLDND1-231ENST00000515620 RESP18Q5W5W9 173 aa10.7□□□□□ -0.7
CLDND1-231ENST00000515620 TMEM270Q6UE05 265 aa10.7□□□□□ -0.7
CLDND1-231ENST00000515620 LINGO4Q6UY18 593 aa10.7□□□□□ -0.7
CLDND1-231ENST00000515620 DPY19L3Q6ZPD9 716 aa10.7□□□□□ -0.7
CLDND1-231ENST00000515620 PARS2Q7L3T8 475 aaKnown RBP10.7□□□□□ -0.7
CLDND1-231ENST00000515620 Q8N9G6 341 aaPredicted RBP10.7□□□□□ -0.7
CLDND1-231ENST00000515620 TBATAQ96M53 351 aa10.7□□□□□ -0.7
CLDND1-231ENST00000515620 LENG8Q96PV6 779 aaPredicted RBP10.7□□□□□ -0.7
CLDND1-231ENST00000515620 PSMB7Q99436 277 aa10.7□□□□□ -0.7
CLDND1-231ENST00000515620 C2orf49Q9BVC5 232 aaPredicted RBP10.7□□□□□ -0.7
CLDND1-231ENST00000515620 TRIM62Q9BVG3 475 aa10.7□□□□□ -0.7
CLDND1-231ENST00000515620 LRRN3Q9H3W5 708 aa10.7□□□□□ -0.7
CLDND1-231ENST00000515620 ZNF71Q9NQZ8 489 aaPredicted RBP10.7□□□□□ -0.7
CLDND1-231ENST00000515620 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.7□□□□□ -0.7
CLDND1-231ENST00000515620 COX16Q9P0S2 106 aa10.7□□□□□ -0.7
CLDND1-231ENST00000515620 PLEKHB1Q9UF11 243 aaPredicted RBP10.7□□□□□ -0.7
CLDND1-231ENST00000515620 TUBD1Q9UJT1 453 aa10.7□□□□□ -0.7
CLDND1-231ENST00000515620 ITM2BQ9Y287 266 aa10.7□□□□□ -0.7
CLDND1-231ENST00000515620 WASF2Q9Y6W5 498 aa10.7□□□□□ -0.7
CLDND1-231ENST00000515620 TRPM6Q9BX84 2022 aa10.7□□□□□ -0.7
CLDND1-231ENST00000515620 M0QYT0 321 aa10.69□□□□□ -0.7
CLDND1-231ENST00000515620 NEMP1O14524 444 aa10.69□□□□□ -0.7
CLDND1-231ENST00000515620 TBXAS1P24557 533 aaPredicted RBP10.69□□□□□ -0.7
CLDND1-231ENST00000515620 ITGB7P26010 798 aa10.69□□□□□ -0.7
CLDND1-231ENST00000515620 CD82P27701 267 aa10.69□□□□□ -0.7
CLDND1-231ENST00000515620 IGFALSP35858 605 aa10.69□□□□□ -0.7
CLDND1-231ENST00000515620 CCR10P46092 362 aa10.69□□□□□ -0.7
CLDND1-231ENST00000515620 AUHQ13825 339 aaKnown RBP10.69□□□□□ -0.7
CLDND1-231ENST00000515620 PTK2BQ14289 1009 aa10.69□□□□□ -0.7
CLDND1-231ENST00000515620 CCNJLQ8IV13 435 aa10.69□□□□□ -0.7
CLDND1-231ENST00000515620 DENND6BQ8NEG7 585 aa10.69□□□□□ -0.7
CLDND1-231ENST00000515620 C9orf43Q8TAL5 461 aaPredicted RBP10.69□□□□□ -0.7
CLDND1-231ENST00000515620 SCG3Q8WXD2 468 aaKnown RBP10.69□□□□□ -0.7
CLDND1-231ENST00000515620 C1QTNF2Q9BXJ5 285 aa10.69□□□□□ -0.7
CLDND1-231ENST00000515620 POPDC2Q9HBU9 364 aa10.69□□□□□ -0.7
CLDND1-231ENST00000515620 DDIT4Q9NX09 232 aa10.69□□□□□ -0.7
CLDND1-231ENST00000515620 PPP4R2Q9NY27 417 aa10.69□□□□□ -0.7
CLDND1-231ENST00000515620 GGT7Q9UJ14 662 aa10.69□□□□□ -0.7
CLDND1-231ENST00000515620 GPR34Q9UPC5 381 aa10.69□□□□□ -0.7
CLDND1-231ENST00000515620 PCDHB4Q9Y5E5 795 aa10.69□□□□□ -0.7
CLDND1-231ENST00000515620 RNF225M0QZC1 329 aaPredicted RBP10.68□□□□□ -0.7
CLDND1-231ENST00000515620 AP1G1O43747 822 aa10.68□□□□□ -0.7
CLDND1-231ENST00000515620 CLDN11O75508 207 aa10.68□□□□□ -0.7
CLDND1-231ENST00000515620 RHOCP08134 193 aa10.68□□□□□ -0.7
CLDND1-231ENST00000515620 SLC2A3P11169 496 aa10.68□□□□□ -0.7
CLDND1-231ENST00000515620 EPB41P11171 864 aaKnown RBP10.68□□□□□ -0.7
CLDND1-231ENST00000515620 L1CAMP32004 1257 aa10.68□□□□□ -0.7
CLDND1-231ENST00000515620 CCR1P32246 355 aa10.68□□□□□ -0.7
CLDND1-231ENST00000515620 ABL2P42684 1182 aa10.68□□□□□ -0.7
CLDND1-231ENST00000515620 ATP1A2P50993 1020 aa10.68□□□□□ -0.7
CLDND1-231ENST00000515620 DNA2P51530 1060 aa10.68□□□□□ -0.7
CLDND1-231ENST00000515620 PPARDQ03181 441 aa10.68□□□□□ -0.7
CLDND1-231ENST00000515620 ELOCQ15369 112 aa10.68□□□□□ -0.7
CLDND1-231ENST00000515620 STILQ15468 1287 aa10.68□□□□□ -0.7
CLDND1-231ENST00000515620 FOXD4L6Q3SYB3 417 aaPredicted RBP10.68□□□□□ -0.7
CLDND1-231ENST00000515620 ZCWPW2Q504Y3 356 aa10.68□□□□□ -0.7
CLDND1-231ENST00000515620 PHF19Q5T6S3 580 aa10.68□□□□□ -0.7
CLDND1-231ENST00000515620 FOXD4L3Q6VB84 417 aaPredicted RBP10.68□□□□□ -0.7
CLDND1-231ENST00000515620 MACC1Q6ZN28 852 aa10.68□□□□□ -0.7
CLDND1-231ENST00000515620 BEND5Q7L4P6 421 aa10.68□□□□□ -0.7
CLDND1-231ENST00000515620 VPS36Q86VN1 386 aa10.68□□□□□ -0.7
CLDND1-231ENST00000515620 ZSCAN30Q86W11 494 aa10.68□□□□□ -0.7
CLDND1-231ENST00000515620 FSTL5Q8N475 847 aaPredicted RBP10.68□□□□□ -0.7
CLDND1-231ENST00000515620 DCAF4L2Q8NA75 395 aa10.68□□□□□ -0.7
CLDND1-231ENST00000515620 TMEM159Q96B96 161 aa10.68□□□□□ -0.7
CLDND1-231ENST00000515620 CMKLR1Q99788 373 aa10.68□□□□□ -0.7
CLDND1-231ENST00000515620 ZDHHC6Q9H6R6 413 aa10.68□□□□□ -0.7
CLDND1-231ENST00000515620 PCDHA7Q9UN72 937 aa10.68□□□□□ -0.7
CLDND1-231ENST00000515620 TBC1D30Q9Y2I9 924 aa10.68□□□□□ -0.7
CLDND1-231ENST00000515620 COQ4Q9Y3A0 265 aa10.68□□□□□ -0.7
CLDND1-231ENST00000515620 ICE1Q9Y2F5 2266 aa10.68□□□□□ -0.7
CLDND1-231ENST00000515620 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.67□□□□□ -0.7
CLDND1-231ENST00000515620 STMND1H3BQB6 276 aa10.67□□□□□ -0.7
CLDND1-231ENST00000515620 TSPAN6O43657 245 aa10.67□□□□□ -0.7
CLDND1-231ENST00000515620 CNTN5O94779 1100 aa10.67□□□□□ -0.7
CLDND1-231ENST00000515620 ALPIP09923 528 aa10.67□□□□□ -0.7
CLDND1-231ENST00000515620 PYGBP11216 843 aa10.67□□□□□ -0.7
CLDND1-231ENST00000515620 CTSEP14091 401 aa10.67□□□□□ -0.7
CLDND1-231ENST00000515620 EIF4A3P38919 411 aaKnown RBP10.67□□□□□ -0.7
CLDND1-231ENST00000515620 ACADSBP45954 432 aa10.67□□□□□ -0.7
CLDND1-231ENST00000515620 RPL34P49207 117 aaKnown RBP10.67□□□□□ -0.7
CLDND1-231ENST00000515620 CDH4P55283 916 aa10.67□□□□□ -0.7
CLDND1-231ENST00000515620 MCCD1P59942 119 aaPredicted RBP10.67□□□□□ -0.7
CLDND1-231ENST00000515620 YWHAZP63104 245 aaKnown RBP10.67□□□□□ -0.7
CLDND1-231ENST00000515620 ZFP36L1Q07352 338 aaKnown RBP10.67□□□□□ -0.7
CLDND1-231ENST00000515620 EIF4EBP2Q13542 120 aaPredicted RBP10.67□□□□□ -0.7
CLDND1-231ENST00000515620 TAF5Q15542 800 aa10.67□□□□□ -0.7
CLDND1-231ENST00000515620 FOXD4L5Q5VV16 416 aaPredicted RBP10.67□□□□□ -0.7
CLDND1-231ENST00000515620 HID1Q8IV36 788 aa10.67□□□□□ -0.7
CLDND1-231ENST00000515620 FOXD4L4Q8WXT5 416 aaPredicted RBP10.67□□□□□ -0.7
CLDND1-231ENST00000515620 KAT5Q92993 513 aa10.67□□□□□ -0.7
CLDND1-231ENST00000515620 CCDC47Q96A33 483 aaKnown RBP10.67□□□□□ -0.7
CLDND1-231ENST00000515620 MIB2Q96AX9 1013 aa10.67□□□□□ -0.7
CLDND1-231ENST00000515620 HEPHQ9BQS7 1158 aa10.67□□□□□ -0.7
CLDND1-231ENST00000515620 HS3ST4Q9Y661 456 aa10.67□□□□□ -0.7
CLDND1-231ENST00000515620 RNF215Q9Y6U7 377 aa10.67□□□□□ -0.7
CLDND1-231ENST00000515620 A0A0D9SEW6 157 aa10.66□□□□□ -0.7
CLDND1-231ENST00000515620 E5RJQ4 531 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms