RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 CALN1Q9BXU9 219 aa17.78■□□□□ 0.44
DDX41-217ENST00000515562 CATSPERBQ9H7T0 1116 aa17.78■□□□□ 0.44
DDX41-217ENST00000515562 FZD3Q9NPG1 666 aa17.78■□□□□ 0.44
DDX41-217ENST00000515562 RTN4Q9NQC3 1192 aaKnown RBP17.78■□□□□ 0.44
DDX41-217ENST00000515562 FZD10Q9ULW2 581 aa17.78■□□□□ 0.44
DDX41-217ENST00000515562 FADS3Q9Y5Q0 445 aa17.78■□□□□ 0.44
DDX41-217ENST00000515562 ZZEF1O43149 2961 aa17.77■□□□□ 0.44
DDX41-217ENST00000515562 A6NNZ2 444 aa17.77■□□□□ 0.44
DDX41-217ENST00000515562 KRIT1O00522 736 aa17.77■□□□□ 0.44
DDX41-217ENST00000515562 TEX33O43247 280 aa17.77■□□□□ 0.44
DDX41-217ENST00000515562 TSPAN6O43657 245 aa17.77■□□□□ 0.44
DDX41-217ENST00000515562 CREB3O43889 395 aa17.77■□□□□ 0.44
DDX41-217ENST00000515562 POP4O95707 220 aaKnown RBP17.77■□□□□ 0.44
DDX41-217ENST00000515562 TNFAIP3P21580 790 aa17.77■□□□□ 0.44
DDX41-217ENST00000515562 HTR7P34969 479 aa17.77■□□□□ 0.44
DDX41-217ENST00000515562 HNF1BP35680 557 aa17.77■□□□□ 0.44
DDX41-217ENST00000515562 ACADVLP49748 655 aa17.77■□□□□ 0.44
DDX41-217ENST00000515562 YBEYP58557 167 aaPredicted RBP17.77■□□□□ 0.44
DDX41-217ENST00000515562 PARP15Q460N3 678 aa17.77■□□□□ 0.44
DDX41-217ENST00000515562 ZNF805Q5CZA5 627 aa17.77■□□□□ 0.44
DDX41-217ENST00000515562 GCNT7Q6ZNI0 430 aa17.77■□□□□ 0.44
DDX41-217ENST00000515562 IRF2BP2Q7Z5L9 587 aa17.77■□□□□ 0.44
DDX41-217ENST00000515562 ABI3BPQ7Z7G0 1075 aa17.77■□□□□ 0.44
DDX41-217ENST00000515562 DCP2Q8IU60 420 aaKnown RBP17.77■□□□□ 0.44
DDX41-217ENST00000515562 PYROXD2Q8N2H3 581 aa17.77■□□□□ 0.44
DDX41-217ENST00000515562 OR13H1Q8NG92 308 aa17.77■□□□□ 0.44
DDX41-217ENST00000515562 GDAP1L1Q96MZ0 367 aa17.77■□□□□ 0.44
DDX41-217ENST00000515562 SYT11Q9BT88 431 aa17.77■□□□□ 0.44
DDX41-217ENST00000515562 SLC17A9Q9BYT1 436 aa17.77■□□□□ 0.44
DDX41-217ENST00000515562 MAGEB5Q9BZ81 275 aa17.77■□□□□ 0.44
DDX41-217ENST00000515562 PARVAQ9NVD7 372 aa17.77■□□□□ 0.44
DDX41-217ENST00000515562 KLHL11Q9NVR0 708 aa17.77■□□□□ 0.44
DDX41-217ENST00000515562 DONSONQ9NYP3 566 aa17.77■□□□□ 0.44
DDX41-217ENST00000515562 DKK4Q9UBT3 224 aa17.77■□□□□ 0.44
DDX41-217ENST00000515562 LRRC53A6NM62 1247 aa17.76■□□□□ 0.43
DDX41-217ENST00000515562 C16orf96A6NNT2 1141 aa17.76■□□□□ 0.43
DDX41-217ENST00000515562 WASH4PA8MWX3 477 aa17.76■□□□□ 0.43
DDX41-217ENST00000515562 BUB1O43683 1085 aa17.76■□□□□ 0.43
DDX41-217ENST00000515562 SDC3O75056 442 aa17.76■□□□□ 0.43
DDX41-217ENST00000515562 TMCC1O94876 653 aa17.76■□□□□ 0.43
DDX41-217ENST00000515562 CKMT2P17540 419 aa17.76■□□□□ 0.43
DDX41-217ENST00000515562 RAD51Q06609 339 aa17.76■□□□□ 0.43
DDX41-217ENST00000515562 DNAJC3Q13217 504 aa17.76■□□□□ 0.43
DDX41-217ENST00000515562 MAPK8IP2Q13387 824 aaPredicted RBP17.76■□□□□ 0.43
DDX41-217ENST00000515562 ILKQ13418 452 aa17.76■□□□□ 0.43
DDX41-217ENST00000515562 HS1BP3Q53T59 392 aa17.76■□□□□ 0.43
DDX41-217ENST00000515562 INO80DQ53TQ3 878 aaPredicted RBP17.76■□□□□ 0.43
DDX41-217ENST00000515562 KYAT3Q6YP21 454 aaKnown RBP17.76■□□□□ 0.43
DDX41-217ENST00000515562 TMC6Q7Z403 805 aa17.76■□□□□ 0.43
DDX41-217ENST00000515562 PTAR1Q7Z6K3 402 aaPredicted RBP17.76■□□□□ 0.43
DDX41-217ENST00000515562 TSC1Q92574 1164 aa17.76■□□□□ 0.43
DDX41-217ENST00000515562 IFT43Q96FT9 208 aa17.76■□□□□ 0.43
DDX41-217ENST00000515562 HS3ST3A1Q9Y663 406 aa17.76■□□□□ 0.43
DDX41-217ENST00000515562 TRPM6Q9BX84 2022 aa17.76■□□□□ 0.43
DDX41-217ENST00000515562 CHD6Q8TD26 2715 aa17.75■□□□□ 0.43
DDX41-217ENST00000515562 A0A1W2PQC6 194 aa17.75■□□□□ 0.43
DDX41-217ENST00000515562 EIF3CLB5ME19 914 aaKnown RBP17.75■□□□□ 0.43
DDX41-217ENST00000515562 TAF4O00268 1085 aa17.75■□□□□ 0.43
DDX41-217ENST00000515562 NEMP1O14524 444 aa17.75■□□□□ 0.43
DDX41-217ENST00000515562 IGSF6O95976 241 aa17.75■□□□□ 0.43
DDX41-217ENST00000515562 UGT2B4P06133 528 aa17.75■□□□□ 0.43
DDX41-217ENST00000515562 ZNF165P49910 485 aa17.75■□□□□ 0.43
DDX41-217ENST00000515562 CLDN2P57739 230 aa17.75■□□□□ 0.43
DDX41-217ENST00000515562 TPI1P60174 286 aa17.75■□□□□ 0.43
DDX41-217ENST00000515562 ZNF211Q13398 564 aaPredicted RBP17.75■□□□□ 0.43
DDX41-217ENST00000515562 MAMLD1Q13495 774 aa17.75■□□□□ 0.43
DDX41-217ENST00000515562 ASIC2Q16515 512 aa17.75■□□□□ 0.43
DDX41-217ENST00000515562 MYLK3Q32MK0 819 aa17.75■□□□□ 0.43
DDX41-217ENST00000515562 CAVIN1Q6NZI2 390 aaKnown RBP17.75■□□□□ 0.43
DDX41-217ENST00000515562 LEKR1Q6ZMV7 388 aa17.75■□□□□ 0.43
DDX41-217ENST00000515562 UMODL1-AS1Q8N2C9 162 aa17.75■□□□□ 0.43
DDX41-217ENST00000515562 PDCD7Q8N8D1 485 aaKnown RBP17.75■□□□□ 0.43
DDX41-217ENST00000515562 EIF3CQ99613 913 aaKnown RBP17.75■□□□□ 0.43
DDX41-217ENST00000515562 NOL6Q9H6R4 1146 aaKnown RBP17.75■□□□□ 0.43
DDX41-217ENST00000515562 GPR27Q9NS67 375 aa17.75■□□□□ 0.43
DDX41-217ENST00000515562 TAS2R14Q9NYV8 317 aa17.75■□□□□ 0.43
DDX41-217ENST00000515562 PKD1L2Q7Z442 2459 aa17.75■□□□□ 0.43
DDX41-217ENST00000515562 DMXL2Q8TDJ6 3036 aa17.74■□□□□ 0.43
DDX41-217ENST00000515562 FAM149AA5PLN7 773 aa17.74■□□□□ 0.43
DDX41-217ENST00000515562 RASA4BC9J798 803 aa17.74■□□□□ 0.43
DDX41-217ENST00000515562 RASA4O43374 803 aa17.74■□□□□ 0.43
DDX41-217ENST00000515562 DGKAP23743 735 aa17.74■□□□□ 0.43
DDX41-217ENST00000515562 PSMA2P25787 234 aa17.74■□□□□ 0.43
DDX41-217ENST00000515562 GKP32189 559 aa17.74■□□□□ 0.43
DDX41-217ENST00000515562 ABL2P42684 1182 aa17.74■□□□□ 0.43
DDX41-217ENST00000515562 RABIFP47224 123 aa17.74■□□□□ 0.43
DDX41-217ENST00000515562 RHOAP61586 193 aa17.74■□□□□ 0.43
DDX41-217ENST00000515562 OGDHQ02218 1023 aa17.74■□□□□ 0.43
DDX41-217ENST00000515562 SGCGQ13326 291 aa17.74■□□□□ 0.43
DDX41-217ENST00000515562 SERINC3Q13530 473 aa17.74■□□□□ 0.43
DDX41-217ENST00000515562 CAMK2BQ13554 666 aa17.74■□□□□ 0.43
DDX41-217ENST00000515562 FGL2Q14314 439 aa17.74■□□□□ 0.43
DDX41-217ENST00000515562 ATXN7L2Q5T6C5 722 aaPredicted RBP17.74■□□□□ 0.43
DDX41-217ENST00000515562 PLEKHA7Q6IQ23 1121 aa17.74■□□□□ 0.43
DDX41-217ENST00000515562 GDPD4Q6W3E5 623 aa17.74■□□□□ 0.43
DDX41-217ENST00000515562 Q6ZSR6 202 aa17.74■□□□□ 0.43
DDX41-217ENST00000515562 SLC22A18ASQ8N1D0 253 aa17.74■□□□□ 0.43
DDX41-217ENST00000515562 DENND6BQ8NEG7 585 aa17.74■□□□□ 0.43
DDX41-217ENST00000515562 OR4C6Q8NH72 309 aa17.74■□□□□ 0.43
DDX41-217ENST00000515562 MDM1Q8TC05 714 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms