RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 RTN2O75298 545 aa9.13□□□□□ -0.95
CDC42SE2-212ENST00000515533 FGFR1OPO95684 399 aaKnown RBP9.13□□□□□ -0.95
CDC42SE2-212ENST00000515533 GLI1P08151 1106 aa9.13□□□□□ -0.95
CDC42SE2-212ENST00000515533 CKMT2P17540 419 aa9.13□□□□□ -0.95
CDC42SE2-212ENST00000515533 USP8P40818 1118 aa9.13□□□□□ -0.95
CDC42SE2-212ENST00000515533 PLK1P53350 603 aa9.13□□□□□ -0.95
CDC42SE2-212ENST00000515533 PITX1P78337 314 aaPredicted RBP9.13□□□□□ -0.95
CDC42SE2-212ENST00000515533 BNIP3Q12983 259 aa9.13□□□□□ -0.95
CDC42SE2-212ENST00000515533 TARDBPQ13148 414 aaKnown RBP eCLIP9.13□□□□□ -0.95
CDC42SE2-212ENST00000515533 PAK1Q13153 545 aa9.13□□□□□ -0.95
CDC42SE2-212ENST00000515533 POM121L1PQ3SYA9 428 aa9.13□□□□□ -0.95
CDC42SE2-212ENST00000515533 EFHC1Q5JVL4 640 aa9.13□□□□□ -0.95
CDC42SE2-212ENST00000515533 SFMBT2Q5VUG0 894 aa9.13□□□□□ -0.95
CDC42SE2-212ENST00000515533 CXorf57Q6NSI4 855 aaKnown RBP9.13□□□□□ -0.95
CDC42SE2-212ENST00000515533 FOXR2Q6PJQ5 311 aa9.13□□□□□ -0.95
CDC42SE2-212ENST00000515533 C20orf204Q6ZNR8 217 aa9.13□□□□□ -0.95
CDC42SE2-212ENST00000515533 TMEM110Q86TL2 294 aa9.13□□□□□ -0.95
CDC42SE2-212ENST00000515533 TRIM69Q86WT6 500 aa9.13□□□□□ -0.95
CDC42SE2-212ENST00000515533 FRS2Q8WU20 508 aa9.13□□□□□ -0.95
CDC42SE2-212ENST00000515533 CRELD1Q96HD1 420 aa9.13□□□□□ -0.95
CDC42SE2-212ENST00000515533 FAM81BQ96LP2 452 aa9.13□□□□□ -0.95
CDC42SE2-212ENST00000515533 CCDC114Q96M63 670 aa9.13□□□□□ -0.95
CDC42SE2-212ENST00000515533 NOX5Q96PH1 765 aa9.13□□□□□ -0.95
CDC42SE2-212ENST00000515533 UBL7Q96S82 380 aaPredicted RBP9.13□□□□□ -0.95
CDC42SE2-212ENST00000515533 NRSN2Q9GZP1 204 aa9.13□□□□□ -0.95
CDC42SE2-212ENST00000515533 EGFL7Q9UHF1 273 aa9.13□□□□□ -0.95
CDC42SE2-212ENST00000515533 VPS28Q9UK41 221 aa9.13□□□□□ -0.95
CDC42SE2-212ENST00000515533 MAN1B1Q9UKM7 699 aa9.13□□□□□ -0.95
CDC42SE2-212ENST00000515533 VANGL2Q9ULK5 521 aa9.13□□□□□ -0.95
CDC42SE2-212ENST00000515533 CNTN6Q9UQ52 1028 aa9.13□□□□□ -0.95
CDC42SE2-212ENST00000515533 LRRK1Q38SD2 2015 aa9.13□□□□□ -0.95
CDC42SE2-212ENST00000515533 SETXQ7Z333 2677 aaKnown RBP9.13□□□□□ -0.95
CDC42SE2-212ENST00000515533 UNC13CQ8NB66 2214 aa9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 C10orf142B7Z368 130 aa9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 BIN1O00499 593 aa9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 MCF2LO15068 1137 aa9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 RNGTTO60942 597 aaKnown RBP9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 SDC3O75056 442 aa9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 GLDCP23378 1020 aa9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 EIF2S3P41091 472 aaKnown RBP9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 METAP1P53582 386 aa9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 STX17P56962 302 aa9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 SNX16P57768 344 aa9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 DAB2P98082 770 aa9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 CCDC15Q0P6D6 951 aa9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 CNTN1Q12860 1018 aa9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 NME3Q13232 169 aa9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 ZNF177Q13360 481 aaPredicted RBP9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 TAF5Q15542 800 aa9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 DLG2Q15700 870 aa9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 ARHGAP44Q17R89 818 aa9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 AGBL4Q5VU57 503 aa9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 FBXL22Q6P050 247 aa9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 FBXL19Q6PCT2 694 aa9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 SPATS2Q86XZ4 545 aaKnown RBP9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 CREBRFQ8IUR6 639 aa9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 PASD1Q8IV76 773 aa9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 ELOA2Q8IYF1 753 aaPredicted RBP9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 DEFB106AQ8N104 65 aa9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 SH2D3CQ8N5H7 860 aa9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 FAM131CQ96AQ9 280 aa9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 KLHDC7BQ96G42 594 aa9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 PPP1R13BQ96KQ4 1090 aa9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 PRMT1Q99873 361 aaKnown RBP9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 FEM1AQ9BSK4 669 aa9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 SRRTQ9BXP5 876 aaKnown RBP9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 MUC3BQ9H195 1237 aa9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 SYNCQ9H7C4 482 aa9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 PREBQ9HCU5 417 aa9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 ACP6Q9NPH0 428 aa9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 DYRK4Q9NR20 520 aa9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 ARHGAP20Q9P2F6 1191 aa9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 SEPT3Q9UH03 358 aa9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 SARDHQ9UL12 918 aa9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 CLCA2Q9UQC9 943 aa9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 GPC6Q9Y625 555 aaPredicted RBP9.12□□□□□ -0.95
CDC42SE2-212ENST00000515533 FLNBO75369 2602 aaKnown RBP9.11□□□□□ -0.95
CDC42SE2-212ENST00000515533 KPNA3O00505 521 aaPredicted RBP9.11□□□□□ -0.95
CDC42SE2-212ENST00000515533 TLX3O43711 291 aaPredicted RBP9.11□□□□□ -0.95
CDC42SE2-212ENST00000515533 BRINP1O60477 761 aa9.11□□□□□ -0.95
CDC42SE2-212ENST00000515533 CLDN11O75508 207 aa9.11□□□□□ -0.95
CDC42SE2-212ENST00000515533 GRAP2O75791 330 aa9.11□□□□□ -0.95
CDC42SE2-212ENST00000515533 ACP1P24666 158 aa9.11□□□□□ -0.95
CDC42SE2-212ENST00000515533 ITPKBP27987 946 aa9.11□□□□□ -0.95
CDC42SE2-212ENST00000515533 NOS2P35228 1153 aa9.11□□□□□ -0.95
CDC42SE2-212ENST00000515533 ACTN2P35609 894 aa9.11□□□□□ -0.95
CDC42SE2-212ENST00000515533 KRT83P78385 493 aa9.11□□□□□ -0.95
CDC42SE2-212ENST00000515533 E2F1Q01094 437 aa9.11□□□□□ -0.95
CDC42SE2-212ENST00000515533 C19orf57Q0VDD7 668 aa9.11□□□□□ -0.95
CDC42SE2-212ENST00000515533 EIF4EBP2Q13542 120 aaPredicted RBP9.11□□□□□ -0.95
CDC42SE2-212ENST00000515533 AUHQ13825 339 aaKnown RBP9.11□□□□□ -0.95
CDC42SE2-212ENST00000515533 MORC3Q14149 939 aa9.11□□□□□ -0.95
CDC42SE2-212ENST00000515533 RTP5Q14D33 572 aa9.11□□□□□ -0.95
CDC42SE2-212ENST00000515533 OR6B2Q6IFH4 312 aa9.11□□□□□ -0.95
CDC42SE2-212ENST00000515533 TRIM65Q6PJ69 517 aa9.11□□□□□ -0.95
CDC42SE2-212ENST00000515533 ATP11CQ8NB49 1132 aa9.11□□□□□ -0.95
CDC42SE2-212ENST00000515533 FCRL3Q96P31 734 aaPredicted RBP9.11□□□□□ -0.95
CDC42SE2-212ENST00000515533 SLC2A13Q96QE2 648 aa9.11□□□□□ -0.95
CDC42SE2-212ENST00000515533 CPXM1Q96SM3 734 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms