RNA–Protein interactions for RNA: ENST00000515479.5

RUFY3-215, Transcript of RUN and FYVE domain containing 3, human

TSL 2

Gene RUFY3, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUFY3-215	ENST00000515479	MAGEH1	Q9H213	219 aa		4.87	□□□□□ -1.63
RUFY3-215	ENST00000515479	MYH16	Q9H6N6	1097 aa		4.87	□□□□□ -1.63
RUFY3-215	ENST00000515479	PLAC1	Q9HBJ0	212 aa		4.87	□□□□□ -1.63
RUFY3-215	ENST00000515479	TXLNG	Q9NUQ3	528 aa		4.87	□□□□□ -1.63
RUFY3-215	ENST00000515479	RRP7A	Q9Y3A4	280 aa	Known RBP	4.87	□□□□□ -1.63
RUFY3-215	ENST00000515479	USP42	Q9H9J4	1324 aa	Known RBP	4.87	□□□□□ -1.63
RUFY3-215	ENST00000515479	MAPK8IP3	Q9UPT6	1336 aa		4.87	□□□□□ -1.63
RUFY3-215	ENST00000515479	LTBP1	Q14766	1721 aa		4.86	□□□□□ -1.63
RUFY3-215	ENST00000515479	UBR2	Q8IWV8	1755 aa		4.86	□□□□□ -1.63
RUFY3-215	ENST00000515479	ADAMTSL1	Q8N6G6	1762 aa		4.86	□□□□□ -1.63
RUFY3-215	ENST00000515479	LOC105369274	A0A096LPK9	316 aa		4.86	□□□□□ -1.63
RUFY3-215	ENST00000515479	LOC102723532	A0A0G2JNH3	316 aa		4.86	□□□□□ -1.63
RUFY3-215	ENST00000515479	NPHP1	O15259	732 aa		4.86	□□□□□ -1.63
RUFY3-215	ENST00000515479	FGF18	O76093	207 aa		4.86	□□□□□ -1.63
RUFY3-215	ENST00000515479	NTSR2	O95665	410 aa		4.86	□□□□□ -1.63
RUFY3-215	ENST00000515479	GLP2R	O95838	553 aa		4.86	□□□□□ -1.63
RUFY3-215	ENST00000515479	HOXC6	P09630	235 aa		4.86	□□□□□ -1.63
RUFY3-215	ENST00000515479	IGFBP2	P18065	325 aa		4.86	□□□□□ -1.63
RUFY3-215	ENST00000515479	MT3	P25713	68 aa		4.86	□□□□□ -1.63
RUFY3-215	ENST00000515479	GRK5	P34947	590 aa		4.86	□□□□□ -1.63
RUFY3-215	ENST00000515479	ITPK1	Q13572	414 aa		4.86	□□□□□ -1.63
RUFY3-215	ENST00000515479	PKN2	Q16513	984 aa	Known RBP	4.86	□□□□□ -1.63
RUFY3-215	ENST00000515479	ARL13A	Q5H913	290 aa	Predicted RBP	4.86	□□□□□ -1.63
RUFY3-215	ENST00000515479	ARL6IP4	Q66PJ3	421 aa	Known RBP	4.86	□□□□□ -1.63
RUFY3-215	ENST00000515479	MDGA2	Q7Z553	956 aa		4.86	□□□□□ -1.63
RUFY3-215	ENST00000515479	DPP9	Q86TI2	863 aa		4.86	□□□□□ -1.63
RUFY3-215	ENST00000515479	NR2C2AP	Q86WQ0	139 aa		4.86	□□□□□ -1.63
RUFY3-215	ENST00000515479	CCAR1	Q8IX12	1150 aa	Known RBP	4.86	□□□□□ -1.63
RUFY3-215	ENST00000515479	OR4N4	Q8N0Y3	316 aa		4.86	□□□□□ -1.63
RUFY3-215	ENST00000515479	BRI3BP	Q8WY22	251 aa		4.86	□□□□□ -1.63
RUFY3-215	ENST00000515479	ZNF622	Q969S3	477 aa	Known RBP eCLIP	4.86	□□□□□ -1.63
RUFY3-215	ENST00000515479	PHF21B	Q96EK2	531 aa		4.86	□□□□□ -1.63
RUFY3-215	ENST00000515479	REXO5	Q96IC2	774 aa	Known RBP	4.86	□□□□□ -1.63
RUFY3-215	ENST00000515479	PKNOX2	Q96KN3	472 aa		4.86	□□□□□ -1.63
RUFY3-215	ENST00000515479	IL21R	Q9HBE5	538 aa		4.86	□□□□□ -1.63
RUFY3-215	ENST00000515479	TXNRD2	Q9NNW7	524 aa		4.86	□□□□□ -1.63
RUFY3-215	ENST00000515479	NECTIN3	Q9NQS3	549 aa		4.86	□□□□□ -1.63
RUFY3-215	ENST00000515479	FBXO4	Q9UKT5	387 aa		4.86	□□□□□ -1.63
RUFY3-215	ENST00000515479	RAB21	Q9UL25	225 aa		4.86	□□□□□ -1.63
RUFY3-215	ENST00000515479	PTGDR2	Q9Y5Y4	395 aa		4.86	□□□□□ -1.63
RUFY3-215	ENST00000515479	KIF16B	Q96L93	1317 aa		4.86	□□□□□ -1.63
RUFY3-215	ENST00000515479	KDR	P35968	1356 aa		4.86	□□□□□ -1.63
RUFY3-215	ENST00000515479		A0A1B0GVT2	93 aa		4.85	□□□□□ -1.63
RUFY3-215	ENST00000515479	OR6C75	A6NL08	312 aa		4.85	□□□□□ -1.63
RUFY3-215	ENST00000515479	BECN2	A8MW95	431 aa		4.85	□□□□□ -1.63
RUFY3-215	ENST00000515479	ERVV-2	B6SEH9	535 aa		4.85	□□□□□ -1.63
RUFY3-215	ENST00000515479	INAFM1	C9JVW0	142 aa		4.85	□□□□□ -1.63
RUFY3-215	ENST00000515479	KRT86	O43790	486 aa		4.85	□□□□□ -1.63
RUFY3-215	ENST00000515479	LCK	P06239	509 aa		4.85	□□□□□ -1.63
RUFY3-215	ENST00000515479	ANXA6	P08133	673 aa		4.85	□□□□□ -1.63
RUFY3-215	ENST00000515479	PCYT1A	P49585	367 aa		4.85	□□□□□ -1.63
RUFY3-215	ENST00000515479	RASSF2	P50749	326 aa		4.85	□□□□□ -1.63
RUFY3-215	ENST00000515479	DSCR9	P59020	149 aa		4.85	□□□□□ -1.63
RUFY3-215	ENST00000515479	RPL15	P61313	204 aa	Known RBP	4.85	□□□□□ -1.63
RUFY3-215	ENST00000515479	KRT81	Q14533	505 aa		4.85	□□□□□ -1.63
RUFY3-215	ENST00000515479	MVP	Q14764	893 aa	Known RBP	4.85	□□□□□ -1.63
RUFY3-215	ENST00000515479	RAB30	Q15771	203 aa		4.85	□□□□□ -1.63
RUFY3-215	ENST00000515479	ZNF628	Q5EBL2	1059 aa		4.85	□□□□□ -1.63
RUFY3-215	ENST00000515479	TRABD2A	Q86V40	505 aa		4.85	□□□□□ -1.63
RUFY3-215	ENST00000515479	SLC25A41	Q8N5S1	370 aa		4.85	□□□□□ -1.63
RUFY3-215	ENST00000515479	GABPB2	Q8TAK5	448 aa	Predicted RBP	4.85	□□□□□ -1.63
RUFY3-215	ENST00000515479	NAA15	Q9BXJ9	866 aa	Known RBP	4.85	□□□□□ -1.63
RUFY3-215	ENST00000515479	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	4.85	□□□□□ -1.63
RUFY3-215	ENST00000515479	SAGE1	Q9NXZ1	904 aa		4.85	□□□□□ -1.63
RUFY3-215	ENST00000515479	POLK	Q9UBT6	870 aa		4.85	□□□□□ -1.63
RUFY3-215	ENST00000515479	SLC12A4	Q9UP95	1085 aa		4.85	□□□□□ -1.63
RUFY3-215	ENST00000515479	TNN	Q9UQP3	1299 aa		4.85	□□□□□ -1.63
RUFY3-215	ENST00000515479	FLT4	P35916	1363 aa		4.85	□□□□□ -1.63
RUFY3-215	ENST00000515479	NCAPD2	Q15021	1401 aa		4.85	□□□□□ -1.63
RUFY3-215	ENST00000515479	HNRNPDL	O14979	420 aa	Known RBP	4.84	□□□□□ -1.63
RUFY3-215	ENST00000515479	RGS14	O43566	566 aa		4.84	□□□□□ -1.63
RUFY3-215	ENST00000515479	SPRY3	O43610	288 aa		4.84	□□□□□ -1.63
RUFY3-215	ENST00000515479	RPP40	O75818	363 aa	Known RBP	4.84	□□□□□ -1.63
RUFY3-215	ENST00000515479	IGHD	P01880	384 aa		4.84	□□□□□ -1.63
RUFY3-215	ENST00000515479	SERPINB2	P05120	415 aa		4.84	□□□□□ -1.63
RUFY3-215	ENST00000515479	ARSB	P15848	533 aa		4.84	□□□□□ -1.63
RUFY3-215	ENST00000515479	TM4SF1	P30408	202 aa		4.84	□□□□□ -1.63
RUFY3-215	ENST00000515479	AKT1	P31749	480 aa		4.84	□□□□□ -1.63
RUFY3-215	ENST00000515479	ALDH18A1	P54886	795 aa	Known RBP	4.84	□□□□□ -1.63
RUFY3-215	ENST00000515479	FOXL2	P58012	376 aa		4.84	□□□□□ -1.63
RUFY3-215	ENST00000515479	CRYZ	Q08257	329 aa	Known RBP	4.84	□□□□□ -1.63
RUFY3-215	ENST00000515479	DDR1	Q08345	913 aa		4.84	□□□□□ -1.63
RUFY3-215	ENST00000515479	GPS2	Q13227	327 aa		4.84	□□□□□ -1.63
RUFY3-215	ENST00000515479	PRAMEF19	Q5SWL8	479 aa		4.84	□□□□□ -1.63
RUFY3-215	ENST00000515479	RTL10	Q7L3V2	364 aa		4.84	□□□□□ -1.63
RUFY3-215	ENST00000515479	RBM23	Q86U06	439 aa	Known RBP	4.84	□□□□□ -1.63
RUFY3-215	ENST00000515479	CADM3	Q8N126	398 aa		4.84	□□□□□ -1.63
RUFY3-215	ENST00000515479	GPC2	Q8N158	579 aa		4.84	□□□□□ -1.63
RUFY3-215	ENST00000515479	IPO4	Q8TEX9	1081 aa	Known RBP	4.84	□□□□□ -1.63
RUFY3-215	ENST00000515479	WDR60	Q8WVS4	1066 aa		4.84	□□□□□ -1.63
RUFY3-215	ENST00000515479	RIPOR3	Q96MK2	946 aa		4.84	□□□□□ -1.63
RUFY3-215	ENST00000515479	CCDC134	Q9H6E4	229 aa		4.84	□□□□□ -1.63
RUFY3-215	ENST00000515479	PNRC2	Q9NPJ4	139 aa	Known RBP	4.84	□□□□□ -1.63
RUFY3-215	ENST00000515479	TM7SF3	Q9NS93	570 aa		4.84	□□□□□ -1.63
RUFY3-215	ENST00000515479	FZD10	Q9ULW2	581 aa		4.84	□□□□□ -1.63
RUFY3-215	ENST00000515479	MYH15	Q9Y2K3	1946 aa		4.84	□□□□□ -1.64
RUFY3-215	ENST00000515479	ABCC4	O15439	1325 aa		4.83	□□□□□ -1.64
RUFY3-215	ENST00000515479	RASA4B	C9J798	803 aa		4.83	□□□□□ -1.64
RUFY3-215	ENST00000515479	MCIDAS	D6RGH6	385 aa		4.83	□□□□□ -1.64
RUFY3-215	ENST00000515479	RASA4	O43374	803 aa		4.83	□□□□□ -1.64

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