RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 C1orf74Q96LT6 269 aa16.05■□□□□ 0.16
LMNA-223ENST00000515459 CRACR2AQ9BSW2 395 aa16.05■□□□□ 0.16
LMNA-223ENST00000515459 SPON2Q9BUD6 331 aa16.05■□□□□ 0.16
LMNA-223ENST00000515459 BOCQ9BWV1 1114 aa16.05■□□□□ 0.16
LMNA-223ENST00000515459 C1QTNF2Q9BXJ5 285 aa16.05■□□□□ 0.16
LMNA-223ENST00000515459 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.05■□□□□ 0.16
LMNA-223ENST00000515459 SPASTQ9UBP0 616 aa16.05■□□□□ 0.16
LMNA-223ENST00000515459 SNX10Q9Y5X0 201 aa16.05■□□□□ 0.16
LMNA-223ENST00000515459 IGLV3-10A0A075B6K4 115 aa16.04■□□□□ 0.16
LMNA-223ENST00000515459 ILVBLA1L0T0 632 aa16.04■□□□□ 0.16
LMNA-223ENST00000515459 PYCARD-AS1I3L0S3 204 aa16.04■□□□□ 0.16
LMNA-223ENST00000515459 SPINT1O43278 529 aa16.04■□□□□ 0.16
LMNA-223ENST00000515459 TSPAN6O43657 245 aa16.04■□□□□ 0.16
LMNA-223ENST00000515459 TNFSF15O95150 251 aa16.04■□□□□ 0.16
LMNA-223ENST00000515459 F9P00740 461 aa16.04■□□□□ 0.16
LMNA-223ENST00000515459 TFE3P19532 575 aaPredicted RBP16.04■□□□□ 0.16
LMNA-223ENST00000515459 BMP6P22004 513 aa16.04■□□□□ 0.16
LMNA-223ENST00000515459 KRT9P35527 623 aa16.04■□□□□ 0.16
LMNA-223ENST00000515459 DNA2P51530 1060 aa16.04■□□□□ 0.16
LMNA-223ENST00000515459 CCNHP51946 323 aaPredicted RBP16.04■□□□□ 0.16
LMNA-223ENST00000515459 STX17P56962 302 aa16.04■□□□□ 0.16
LMNA-223ENST00000515459 RNASE9P60153 205 aaKnown RBP16.04■□□□□ 0.16
LMNA-223ENST00000515459 PFN3P60673 137 aa16.04■□□□□ 0.16
LMNA-223ENST00000515459 PTK2Q05397 1052 aa16.04■□□□□ 0.16
LMNA-223ENST00000515459 DEUP1Q05D60 604 aa16.04■□□□□ 0.16
LMNA-223ENST00000515459 EIF2B5Q13144 721 aaKnown RBP16.04■□□□□ 0.16
LMNA-223ENST00000515459 ZSCAN23Q3MJ62 389 aa16.04■□□□□ 0.16
LMNA-223ENST00000515459 PTPN20Q4JDL3 420 aa16.04■□□□□ 0.16
LMNA-223ENST00000515459 TPRG1LQ5T0D9 272 aa16.04■□□□□ 0.16
LMNA-223ENST00000515459 ZNF783Q6ZMS7 281 aa16.04■□□□□ 0.16
LMNA-223ENST00000515459 PARS2Q7L3T8 475 aaKnown RBP16.04■□□□□ 0.16
LMNA-223ENST00000515459 CLEC14AQ86T13 490 aa16.04■□□□□ 0.16
LMNA-223ENST00000515459 ELOA2Q8IYF1 753 aaPredicted RBP16.04■□□□□ 0.16
LMNA-223ENST00000515459 DENND6BQ8NEG7 585 aa16.04■□□□□ 0.16
LMNA-223ENST00000515459 SHC3Q92529 594 aa16.04■□□□□ 0.16
LMNA-223ENST00000515459 NAT6Q93015 286 aa16.04■□□□□ 0.16
LMNA-223ENST00000515459 PGAP3Q96FM1 320 aaPredicted RBP16.04■□□□□ 0.16
LMNA-223ENST00000515459 ATP13A1Q9HD20 1204 aa16.04■□□□□ 0.16
LMNA-223ENST00000515459 TMEM51Q9NW97 253 aa16.04■□□□□ 0.16
LMNA-223ENST00000515459 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.04■□□□□ 0.163e-8■■□□□ 12.4
LMNA-223ENST00000515459 APEX2Q9UBZ4 518 aa16.04■□□□□ 0.16
LMNA-223ENST00000515459 CCDC187A0A096LP49 1063 aa16.03■□□□□ 0.16
LMNA-223ENST00000515459 PMS2P1A4D2B8 440 aa16.03■□□□□ 0.16
LMNA-223ENST00000515459 IGLON5A6NGN9 336 aa16.03■□□□□ 0.16
LMNA-223ENST00000515459 CYSRT1A8MQ03 144 aa16.03■□□□□ 0.16
LMNA-223ENST00000515459 NEMP1O14524 444 aa16.03■□□□□ 0.16
LMNA-223ENST00000515459 SRGAP2O75044 1071 aa16.03■□□□□ 0.16
LMNA-223ENST00000515459 ZMPSTE24O75844 475 aa16.03■□□□□ 0.16
LMNA-223ENST00000515459 WISP1O95388 367 aa16.03■□□□□ 0.16
LMNA-223ENST00000515459 SLC9A1P19634 815 aa16.03■□□□□ 0.16
LMNA-223ENST00000515459 THOP1P52888 689 aa16.03■□□□□ 0.16
LMNA-223ENST00000515459 ARF5P84085 180 aa16.03■□□□□ 0.16
LMNA-223ENST00000515459 PAK1Q13153 545 aa16.03■□□□□ 0.16
LMNA-223ENST00000515459 CLN3Q13286 438 aa16.03■□□□□ 0.16
LMNA-223ENST00000515459 SPIDRQ14159 915 aa16.03■□□□□ 0.16
LMNA-223ENST00000515459 PTK2BQ14289 1009 aa16.03■□□□□ 0.16
LMNA-223ENST00000515459 DRAP1Q14919 205 aaPredicted RBP16.03■□□□□ 0.16
LMNA-223ENST00000515459 RBFAQ8N0V3 343 aa16.03■□□□□ 0.16
LMNA-223ENST00000515459 ASB12Q8WXK4 309 aa16.03■□□□□ 0.16
LMNA-223ENST00000515459 NT5C3BQ969T7 300 aa16.03■□□□□ 0.16
LMNA-223ENST00000515459 RAB7BQ96AH8 199 aa16.03■□□□□ 0.16
LMNA-223ENST00000515459 ZDHHC6Q9H6R6 413 aa16.03■□□□□ 0.16
LMNA-223ENST00000515459 TMPRSS4Q9NRS4 437 aa16.03■□□□□ 0.16
LMNA-223ENST00000515459 APOBEC3BQ9UH17 382 aaKnown RBP16.03■□□□□ 0.16
LMNA-223ENST00000515459 GCATO75600 419 aa16.02■□□□□ 0.16
LMNA-223ENST00000515459 FGFR1OPO95684 399 aaKnown RBP16.02■□□□□ 0.16
LMNA-223ENST00000515459 ITGA2BP08514 1039 aa16.02■□□□□ 0.16
LMNA-223ENST00000515459 ADKP55263 362 aaKnown RBP16.02■□□□□ 0.16
LMNA-223ENST00000515459 APBA1Q02410 837 aa16.02■□□□□ 0.16
LMNA-223ENST00000515459 GNA12Q03113 381 aa16.02■□□□□ 0.16
LMNA-223ENST00000515459 MORC3Q14149 939 aa16.02■□□□□ 0.16
LMNA-223ENST00000515459 ARL13BQ3SXY8 428 aa16.02■□□□□ 0.16
LMNA-223ENST00000515459 PRRT3Q5FWE3 981 aa16.02■□□□□ 0.16
LMNA-223ENST00000515459 C6orf132Q5T0Z8 1188 aa16.02■□□□□ 0.16
LMNA-223ENST00000515459 SMYD5Q6GMV2 418 aa16.02■□□□□ 0.16
LMNA-223ENST00000515459 GBP6Q6ZN66 633 aa16.02■□□□□ 0.16
LMNA-223ENST00000515459 SLC35F3Q8IY50 421 aa16.02■□□□□ 0.16
LMNA-223ENST00000515459 PHACTR4Q8IZ21 702 aa16.02■□□□□ 0.16
LMNA-223ENST00000515459 TBATAQ96M53 351 aa16.02■□□□□ 0.16
LMNA-223ENST00000515459 CCNL2Q96S94 520 aaPredicted RBP16.02■□□□□ 0.16
LMNA-223ENST00000515459 TBCBQ99426 244 aa16.02■□□□□ 0.16
LMNA-223ENST00000515459 CCDC3Q9BQI4 270 aa16.02■□□□□ 0.16
LMNA-223ENST00000515459 ZYG11BQ9C0D3 744 aa16.02■□□□□ 0.16
LMNA-223ENST00000515459 TCEAL2Q9H3H9 227 aaPredicted RBP16.02■□□□□ 0.16
LMNA-223ENST00000515459 HECAQ9UBI9 543 aaPredicted RBP16.02■□□□□ 0.16
LMNA-223ENST00000515459 ZNF212Q9UDV6 495 aa16.02■□□□□ 0.16
LMNA-223ENST00000515459 FCF1Q9Y324 198 aaKnown RBP16.02■□□□□ 0.16
LMNA-223ENST00000515459 MAST4O15021 2626 aa16.01■□□□□ 0.15
LMNA-223ENST00000515459 C16orf96A6NNT2 1141 aa16.01■□□□□ 0.15
LMNA-223ENST00000515459 LMO7DNF2Z398 122 aa16.01■□□□□ 0.15
LMNA-223ENST00000515459 ARHGAP6O43182 974 aa16.01■□□□□ 0.15
LMNA-223ENST00000515459 ANXA6P08133 673 aa16.01■□□□□ 0.15
LMNA-223ENST00000515459 ABL2P42684 1182 aa16.01■□□□□ 0.15
LMNA-223ENST00000515459 PDX1P52945 283 aa16.01■□□□□ 0.15
LMNA-223ENST00000515459 C1orf61Q13536 156 aa16.01■□□□□ 0.15
LMNA-223ENST00000515459 SLC25A52Q3SY17 297 aa16.01■□□□□ 0.15
LMNA-223ENST00000515459 ZNF805Q5CZA5 627 aa16.01■□□□□ 0.15
LMNA-223ENST00000515459 ESRP1Q6NXG1 681 aaKnown RBP16.01■□□□□ 0.15
LMNA-223ENST00000515459 PRICKLE2Q7Z3G6 844 aa16.01■□□□□ 0.15
LMNA-223ENST00000515459 PLPP6Q8IY26 295 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms