RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 ETFBP38117 255 aa13.54□□□□□ -0.24
PFDN1-206ENST00000514611 TARDBPQ13148 414 aaKnown RBP eCLIP13.54□□□□□ -0.24
PFDN1-206ENST00000514611 LRRC73Q5JTD7 316 aa13.54□□□□□ -0.24
PFDN1-206ENST00000514611 ATXN7L2Q5T6C5 722 aaPredicted RBP13.54□□□□□ -0.24
PFDN1-206ENST00000514611 KIAA1161Q6NSJ0 714 aa13.54□□□□□ -0.24
PFDN1-206ENST00000514611 DNAJC24Q6P3W2 148 aa13.54□□□□□ -0.24
PFDN1-206ENST00000514611 Q6ZSR6 202 aa13.54□□□□□ -0.24
PFDN1-206ENST00000514611 ANKRD20A12PQ8NF67 263 aa13.54□□□□□ -0.24
PFDN1-206ENST00000514611 ISG20Q96AZ6 181 aaKnown RBP13.54□□□□□ -0.24
PFDN1-206ENST00000514611 BMFQ96LC9 184 aa13.54□□□□□ -0.24
PFDN1-206ENST00000514611 GBP4Q96PP9 640 aa13.54□□□□□ -0.24
PFDN1-206ENST00000514611 SLC17A9Q9BYT1 436 aa13.54□□□□□ -0.24
PFDN1-206ENST00000514611 GPR27Q9NS67 375 aa13.54□□□□□ -0.24
PFDN1-206ENST00000514611 DSPP15924 2871 aaKnown RBP13.54□□□□□ -0.24
PFDN1-206ENST00000514611 NBEAQ8NFP9 2946 aa13.53□□□□□ -0.24
PFDN1-206ENST00000514611 C16orf96A6NNT2 1141 aa13.53□□□□□ -0.24
PFDN1-206ENST00000514611 KRIT1O00522 736 aa13.53□□□□□ -0.24
PFDN1-206ENST00000514611 AP1G1O43747 822 aa13.53□□□□□ -0.24
PFDN1-206ENST00000514611 TMCC1O94876 653 aa13.53□□□□□ -0.24
PFDN1-206ENST00000514611 GSRP00390 522 aa13.53□□□□□ -0.24
PFDN1-206ENST00000514611 GIMD1P0DJR0 217 aa13.53□□□□□ -0.24
PFDN1-206ENST00000514611 MYF5P13349 255 aa13.53□□□□□ -0.24
PFDN1-206ENST00000514611 ATP1A3P13637 1013 aa13.53□□□□□ -0.24
PFDN1-206ENST00000514611 ACP1P24666 158 aa13.53□□□□□ -0.24
PFDN1-206ENST00000514611 RPL7AP62424 266 aaKnown RBP13.53□□□□□ -0.24
PFDN1-206ENST00000514611 RPS21P63220 83 aaKnown RBP13.53□□□□□ -0.24
PFDN1-206ENST00000514611 ZNF211Q13398 564 aaPredicted RBP13.53□□□□□ -0.24
PFDN1-206ENST00000514611 POLD3Q15054 466 aaPredicted RBP13.53□□□□□ -0.24
PFDN1-206ENST00000514611 TPRG1LQ5T0D9 272 aa13.53□□□□□ -0.24
PFDN1-206ENST00000514611 SCYL2Q6P3W7 929 aa13.53□□□□□ -0.24
PFDN1-206ENST00000514611 KYAT3Q6YP21 454 aaKnown RBP13.53□□□□□ -0.24
PFDN1-206ENST00000514611 SLFN11Q7Z7L1 901 aa13.53□□□□□ -0.24
PFDN1-206ENST00000514611 ZNF354CQ86Y25 554 aa13.53□□□□□ -0.24
PFDN1-206ENST00000514611 AOPEPQ8N6M6 819 aa13.53□□□□□ -0.24
PFDN1-206ENST00000514611 OR2AP1Q8NGE2 309 aa13.53□□□□□ -0.24
PFDN1-206ENST00000514611 OR4C6Q8NH72 309 aa13.53□□□□□ -0.24
PFDN1-206ENST00000514611 BAP1Q92560 729 aa13.53□□□□□ -0.24
PFDN1-206ENST00000514611 NXPE2Q96DL1 559 aa13.53□□□□□ -0.24
PFDN1-206ENST00000514611 CRELD1Q96HD1 420 aa13.53□□□□□ -0.24
PFDN1-206ENST00000514611 ERGIC2Q96RQ1 377 aa13.53□□□□□ -0.24
PFDN1-206ENST00000514611 AGPAT1Q99943 283 aa13.53□□□□□ -0.24
PFDN1-206ENST00000514611 KLC2Q9H0B6 622 aa13.53□□□□□ -0.24
PFDN1-206ENST00000514611 MAGEH1Q9H213 219 aa13.53□□□□□ -0.24
PFDN1-206ENST00000514611 NOL6Q9H6R4 1146 aaKnown RBP13.53□□□□□ -0.24
PFDN1-206ENST00000514611 DNAJC28Q9NX36 388 aa13.53□□□□□ -0.24
PFDN1-206ENST00000514611 DOCK9Q9BZ29 2069 aa13.52□□□□□ -0.24
PFDN1-206ENST00000514611 CXorf51AA0A1B0GTR3 108 aa13.52□□□□□ -0.25
PFDN1-206ENST00000514611 IGLON5A6NGN9 336 aa13.52□□□□□ -0.25
PFDN1-206ENST00000514611 SIGLEC16A6NMB1 481 aa13.52□□□□□ -0.25
PFDN1-206ENST00000514611 BUB1O43683 1085 aa13.52□□□□□ -0.25
PFDN1-206ENST00000514611 KDELR3O43731 214 aa13.52□□□□□ -0.25
PFDN1-206ENST00000514611 CREB3O43889 395 aa13.52□□□□□ -0.25
PFDN1-206ENST00000514611 NEBLO76041 1014 aa13.52□□□□□ -0.25
PFDN1-206ENST00000514611 CDK4P11802 303 aa13.52□□□□□ -0.25
PFDN1-206ENST00000514611 CDK11BP21127 795 aaKnown RBP13.52□□□□□ -0.25
PFDN1-206ENST00000514611 EPHB2P29323 1055 aa13.52□□□□□ -0.25
PFDN1-206ENST00000514611 ZNF143P52747 638 aaPredicted RBP13.52□□□□□ -0.25
PFDN1-206ENST00000514611 GEMIN4P57678 1058 aaKnown RBP13.52□□□□□ -0.25
PFDN1-206ENST00000514611 SNRPD1P62314 119 aaKnown RBP13.52□□□□□ -0.25
PFDN1-206ENST00000514611 DAB2P98082 770 aa13.52□□□□□ -0.25
PFDN1-206ENST00000514611 INSM1Q01101 510 aaPredicted RBP13.52□□□□□ -0.25
PFDN1-206ENST00000514611 OGDHQ02218 1023 aa13.52□□□□□ -0.25
PFDN1-206ENST00000514611 C1QBPQ07021 282 aaKnown RBP13.52□□□□□ -0.25
PFDN1-206ENST00000514611 ILKQ13418 452 aa13.52□□□□□ -0.25
PFDN1-206ENST00000514611 FZD2Q14332 565 aa13.52□□□□□ -0.25
PFDN1-206ENST00000514611 ZNF805Q5CZA5 627 aa13.52□□□□□ -0.25
PFDN1-206ENST00000514611 EFHC2Q5JST6 749 aa13.52□□□□□ -0.25
PFDN1-206ENST00000514611 PPP1R15BQ5SWA1 713 aa13.52□□□□□ -0.25
PFDN1-206ENST00000514611 TMC6Q7Z403 805 aa13.52□□□□□ -0.25
PFDN1-206ENST00000514611 PDZD3Q86UT5 571 aa13.52□□□□□ -0.25
PFDN1-206ENST00000514611 PLPP6Q8IY26 295 aa13.52□□□□□ -0.25
PFDN1-206ENST00000514611 RTL3Q8N8U3 475 aaKnown RBP13.52□□□□□ -0.25
PFDN1-206ENST00000514611 HMCESQ96FZ2 354 aa13.52□□□□□ -0.25
PFDN1-206ENST00000514611 FEM1CQ96JP0 617 aa13.52□□□□□ -0.25
PFDN1-206ENST00000514611 KLHL32Q96NJ5 620 aa13.52□□□□□ -0.25
PFDN1-206ENST00000514611 DCBLD2Q96PD2 775 aa13.52□□□□□ -0.25
PFDN1-206ENST00000514611 KLF6Q99612 283 aaPredicted RBP13.52□□□□□ -0.25
PFDN1-206ENST00000514611 RETREG1Q9H6L5 497 aa13.52□□□□□ -0.25
PFDN1-206ENST00000514611 TAS2R14Q9NYV8 317 aa13.52□□□□□ -0.25
PFDN1-206ENST00000514611 FZD10Q9ULW2 581 aa13.52□□□□□ -0.25
PFDN1-206ENST00000514611 HPCAL4Q9UM19 191 aa13.52□□□□□ -0.25
PFDN1-206ENST00000514611 FAM208BQ5VWN6 2430 aa13.52□□□□□ -0.25
PFDN1-206ENST00000514611 ADAMTS20P59510 1910 aa13.51□□□□□ -0.25
PFDN1-206ENST00000514611 NEMP1O14524 444 aa13.51□□□□□ -0.25
PFDN1-206ENST00000514611 ATMINO43313 823 aaPredicted RBP13.51□□□□□ -0.25
PFDN1-206ENST00000514611 SEMG2Q02383 582 aa13.51□□□□□ -0.25
PFDN1-206ENST00000514611 TYRO3Q06418 890 aa13.51□□□□□ -0.25
PFDN1-206ENST00000514611 MYLK3Q32MK0 819 aa13.51□□□□□ -0.25
PFDN1-206ENST00000514611 HS1BP3Q53T59 392 aa13.51□□□□□ -0.25
PFDN1-206ENST00000514611 CCDC183Q5T5S1 534 aa13.51□□□□□ -0.25
PFDN1-206ENST00000514611 PARGQ86W56 976 aa13.51□□□□□ -0.25
PFDN1-206ENST00000514611 DNAAF5Q86Y56 855 aa13.51□□□□□ -0.25
PFDN1-206ENST00000514611 ZNF548Q8NEK5 533 aaPredicted RBP13.51□□□□□ -0.25
PFDN1-206ENST00000514611 RFFLQ8WZ73 363 aa13.51□□□□□ -0.25
PFDN1-206ENST00000514611 LRIG1Q96JA1 1093 aa13.51□□□□□ -0.25
PFDN1-206ENST00000514611 EXOC2Q96KP1 924 aa13.51□□□□□ -0.25
PFDN1-206ENST00000514611 SCUBE2Q9NQ36 999 aa13.51□□□□□ -0.25
PFDN1-206ENST00000514611 GPATCH2LQ9NWQ4 482 aa13.51□□□□□ -0.25
PFDN1-206ENST00000514611 KLF15Q9UIH9 416 aa13.51□□□□□ -0.25
PFDN1-206ENST00000514611 CLCA2Q9UQC9 943 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms