RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 ACBD3Q9H3P7 528 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 FAM114A2Q9NRY5 505 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 AMACRQ9UHK6 382 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 SCML1Q9UN30 329 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 NEU3Q9UQ49 428 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 HS3ST2Q9Y278 367 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 ABCA7Q8IZY2 2146 aa8.48□□□□□ -1.05
CCL28-204ENST00000514421 OTOGLQ3ZCN5 2332 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 TCRBV7S2A1N4TA0A589 114 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 PRR23AA6NEV1 266 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 ARHGAP42A6NI28 874 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 C3orf70A6NLC5 250 aaPredicted RBP8.47□□□□□ -1.05
CCL28-204ENST00000514421 RASA4BC9J798 803 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 AGPSO00116 658 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 MCF2LO15068 1137 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 TTI1O43156 1089 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 RASA4O43374 803 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 SMAD6O43541 496 aaKnown RBP8.47□□□□□ -1.05
CCL28-204ENST00000514421 CD160O95971 181 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 DNTTP04053 509 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 RETP07949 1114 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 AMPD1P23109 780 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 GLDCP23378 1020 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 IL4RP24394 825 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 SLC8A1P32418 973 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 COILP38432 576 aaPredicted RBP8.47□□□□□ -1.05
CCL28-204ENST00000514421 TPMTP51580 245 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 CDH6P55285 790 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 DR1Q01658 176 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 SLC25A11Q02978 314 aaKnown RBP8.47□□□□□ -1.05
CCL28-204ENST00000514421 GABPB1Q06547 395 aaPredicted RBP8.47□□□□□ -1.05
CCL28-204ENST00000514421 GPS2Q13227 327 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 SERINC3Q13530 473 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 DPYSQ14117 519 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 ATP13A4Q4VNC1 1196 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 INO80DQ53TQ3 878 aaPredicted RBP8.47□□□□□ -1.05
CCL28-204ENST00000514421 FAM46CQ5VWP2 391 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 ZNF776Q68DI1 518 aaPredicted RBP8.47□□□□□ -1.05
CCL28-204ENST00000514421 LAIR1Q6GTX8 287 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 AADACL2Q6P093 401 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 TTC27Q6P3X3 843 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 LINGO4Q6UY18 593 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 ASCL5Q7RTU5 278 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 ALYREFQ86V81 257 aaKnown RBP8.47□□□□□ -1.05
CCL28-204ENST00000514421 VSIG1Q86XK7 387 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 ZNF354CQ86Y25 554 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 JAMLQ86YT9 394 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 PLPP6Q8IY26 295 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 STK40Q8N2I9 435 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 FAM160A2Q8N612 972 aaPredicted RBP8.47□□□□□ -1.05
CCL28-204ENST00000514421 FRMD1Q8N878 549 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 OR8D1Q8WZ84 308 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 ISG20Q96AZ6 181 aaKnown RBP8.47□□□□□ -1.05
CCL28-204ENST00000514421 RBM41Q96IZ5 413 aaKnown RBP8.47□□□□□ -1.05
CCL28-204ENST00000514421 CCDC114Q96M63 670 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 CEP44Q9C0F1 390 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 SLC39A8Q9C0K1 460 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 DUSP15Q9H1R2 295 aaPredicted RBP8.47□□□□□ -1.05
CCL28-204ENST00000514421 NOL6Q9H6R4 1146 aaKnown RBP8.47□□□□□ -1.05
CCL28-204ENST00000514421 PCDH18Q9HCL0 1135 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 ZDHHC18Q9NUE0 388 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.47□□□□□ -1.05
CCL28-204ENST00000514421 DDX56Q9NY93 547 aaKnown RBP8.47□□□□□ -1.05
CCL28-204ENST00000514421 WSB2Q9NYS7 404 aaPredicted RBP8.47□□□□□ -1.05
CCL28-204ENST00000514421 USP36Q9P275 1121 aaKnown RBP8.47□□□□□ -1.05
CCL28-204ENST00000514421 RCOR3Q9P2K3 495 aaPredicted RBP8.47□□□□□ -1.05
CCL28-204ENST00000514421 FEZ2Q9UHY8 353 aaPredicted RBP8.47□□□□□ -1.05
CCL28-204ENST00000514421 NFU1Q9UMS0 254 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 CYP8B1Q9UNU6 501 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 SMG5Q9UPR3 1016 aaKnown RBP8.47□□□□□ -1.05
CCL28-204ENST00000514421 NCKAP1Q9Y2A7 1128 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 UTP11Q9Y3A2 253 aaKnown RBP8.47□□□□□ -1.05
CCL28-204ENST00000514421 NEU2Q9Y3R4 380 aa8.47□□□□□ -1.05
CCL28-204ENST00000514421 IGHV1OR15-9A0A0B4J2B8 117 aa8.46□□□□□ -1.06
CCL28-204ENST00000514421 H3BQF6 201 aa8.46□□□□□ -1.06
CCL28-204ENST00000514421 K7ERQ8 282 aa8.46□□□□□ -1.06
CCL28-204ENST00000514421 SNPHO15079 494 aa8.46□□□□□ -1.06
CCL28-204ENST00000514421 ALOX15BO15296 676 aa8.46□□□□□ -1.06
CCL28-204ENST00000514421 GFRA3O60609 400 aa8.46□□□□□ -1.06
CCL28-204ENST00000514421 NDUFS2O75306 463 aa8.46□□□□□ -1.06
CCL28-204ENST00000514421 ZNF821O75541 412 aaPredicted RBP8.46□□□□□ -1.06
CCL28-204ENST00000514421 SYF2O95926 243 aaKnown RBP8.46□□□□□ -1.06
CCL28-204ENST00000514421 IGLV3-19P01714 112 aa8.46□□□□□ -1.06
CCL28-204ENST00000514421 FAM153BP0C7A2 387 aa8.46□□□□□ -1.06
CCL28-204ENST00000514421 C5AR1P21730 350 aa8.46□□□□□ -1.06
CCL28-204ENST00000514421 BCKDHBP21953 392 aa8.46□□□□□ -1.06
CCL28-204ENST00000514421 KDELR1P24390 212 aa8.46□□□□□ -1.06
CCL28-204ENST00000514421 CD6P30203 668 aa8.46□□□□□ -1.06
CCL28-204ENST00000514421 RECQLP46063 649 aaPredicted RBP8.46□□□□□ -1.06
CCL28-204ENST00000514421 PAPOLAP51003 745 aaKnown RBP8.46□□□□□ -1.06
CCL28-204ENST00000514421 ARSEP51690 589 aa8.46□□□□□ -1.06
CCL28-204ENST00000514421 ARF5P84085 180 aa8.46□□□□□ -1.06
CCL28-204ENST00000514421 ELAVL3Q14576 367 aaKnown RBP8.46□□□□□ -1.06
CCL28-204ENST00000514421 TRADDQ15628 312 aa8.46□□□□□ -1.06
CCL28-204ENST00000514421 CCNG2Q16589 344 aa8.46□□□□□ -1.06
CCL28-204ENST00000514421 LPAL2Q16609 132 aa8.46□□□□□ -1.06
CCL28-204ENST00000514421 FAM153CQ494X1 144 aa8.46□□□□□ -1.06
CCL28-204ENST00000514421 TTC31Q49AM3 519 aaPredicted RBP8.46□□□□□ -1.06
CCL28-204ENST00000514421 CARD16Q5EG05 197 aa8.46□□□□□ -1.06
CCL28-204ENST00000514421 ZFYVE27Q5T4F4 411 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms