RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 TMEM259Q4ZIN3 620 aa15.65■□□□□ 0.1
TPM3-219ENST00000509409 MANEALQ5VSG8 457 aa15.65■□□□□ 0.1
TPM3-219ENST00000509409 WDR59Q6PJI9 974 aa15.65■□□□□ 0.1
TPM3-219ENST00000509409 GCNT7Q6ZNI0 430 aa15.65■□□□□ 0.1
TPM3-219ENST00000509409 CLEC17AQ6ZS10 378 aa15.65■□□□□ 0.1
TPM3-219ENST00000509409 PARS2Q7L3T8 475 aaKnown RBP15.65■□□□□ 0.1
TPM3-219ENST00000509409 ABI3BPQ7Z7G0 1075 aa15.65■□□□□ 0.1
TPM3-219ENST00000509409 SLFN11Q7Z7L1 901 aa15.65■□□□□ 0.1
TPM3-219ENST00000509409 NLRP14Q86W24 1093 aa15.65■□□□□ 0.1
TPM3-219ENST00000509409 PLPP6Q8IY26 295 aa15.65■□□□□ 0.1
TPM3-219ENST00000509409 CENPIQ92674 756 aaPredicted RBP15.65■□□□□ 0.1
TPM3-219ENST00000509409 BMFQ96LC9 184 aa15.65■□□□□ 0.1
TPM3-219ENST00000509409 GBP4Q96PP9 640 aa15.65■□□□□ 0.1
TPM3-219ENST00000509409 PTPRBP23467 1997 aa15.65■□□□□ 0.1
TPM3-219ENST00000509409 ANKRD11Q6UB99 2663 aaPredicted RBP15.64■□□□□ 0.09
TPM3-219ENST00000509409 NEMP2A6NFY4 417 aa15.64■□□□□ 0.09
TPM3-219ENST00000509409 SIGLEC16A6NMB1 481 aa15.64■□□□□ 0.09
TPM3-219ENST00000509409 FPGTO14772 594 aa15.64■□□□□ 0.09
TPM3-219ENST00000509409 TSPAN6O43657 245 aa15.64■□□□□ 0.09
TPM3-219ENST00000509409 KDELR3O43731 214 aa15.64■□□□□ 0.09
TPM3-219ENST00000509409 AP1G1O43747 822 aa15.64■□□□□ 0.09
TPM3-219ENST00000509409 PIAS2O75928 621 aa15.64■□□□□ 0.09
TPM3-219ENST00000509409 POP4O95707 220 aaKnown RBP15.64■□□□□ 0.09
TPM3-219ENST00000509409 GSRP00390 522 aa15.64■□□□□ 0.09
TPM3-219ENST00000509409 HDAC4P56524 1084 aa15.64■□□□□ 0.09
TPM3-219ENST00000509409 MYL5Q02045 173 aa15.64■□□□□ 0.09
TPM3-219ENST00000509409 RAD51Q06609 339 aa15.64■□□□□ 0.09
TPM3-219ENST00000509409 PTP4A2Q12974 167 aa15.64■□□□□ 0.09
TPM3-219ENST00000509409 FGL2Q14314 439 aa15.64■□□□□ 0.09
TPM3-219ENST00000509409 MYLK3Q32MK0 819 aa15.64■□□□□ 0.09
TPM3-219ENST00000509409 ZNF805Q5CZA5 627 aa15.64■□□□□ 0.09
TPM3-219ENST00000509409 DNAJC24Q6P3W2 148 aa15.64■□□□□ 0.09
TPM3-219ENST00000509409 PHF13Q86YI8 300 aaPredicted RBP15.64■□□□□ 0.09
TPM3-219ENST00000509409 OR2AP1Q8NGE2 309 aa15.64■□□□□ 0.09
TPM3-219ENST00000509409 OR4C6Q8NH72 309 aa15.64■□□□□ 0.09
TPM3-219ENST00000509409 RAB7BQ96AH8 199 aa15.64■□□□□ 0.09
TPM3-219ENST00000509409 IFT43Q96FT9 208 aa15.64■□□□□ 0.09
TPM3-219ENST00000509409 AGPAT1Q99943 283 aa15.64■□□□□ 0.09
TPM3-219ENST00000509409 SCUBE2Q9NQ36 999 aa15.64■□□□□ 0.09
TPM3-219ENST00000509409 LIMA1Q9UHB6 759 aaKnown RBP15.64■□□□□ 0.09
TPM3-219ENST00000509409 CLCA2Q9UQC9 943 aa15.64■□□□□ 0.09
TPM3-219ENST00000509409 KNTC1P50748 2209 aa15.64■□□□□ 0.09
TPM3-219ENST00000509409 URB1O60287 2271 aaKnown RBP15.64■□□□□ 0.09
TPM3-219ENST00000509409 CXorf51AA0A1B0GTR3 108 aa15.63■□□□□ 0.09
TPM3-219ENST00000509409 POM121BA6NF01 834 aa15.63■□□□□ 0.09
TPM3-219ENST00000509409 LGALS16A8MUM7 142 aa15.63■□□□□ 0.09
TPM3-219ENST00000509409 GOLGA6L22H0YM25 854 aa15.63■□□□□ 0.09
TPM3-219ENST00000509409 RAD51BO15315 384 aa15.63■□□□□ 0.09
TPM3-219ENST00000509409 CREB3O43889 395 aa15.63■□□□□ 0.09
TPM3-219ENST00000509409 MT-CO3P00414 261 aa15.63■□□□□ 0.09
TPM3-219ENST00000509409 UGT2B4P06133 528 aa15.63■□□□□ 0.09
TPM3-219ENST00000509409 DESP17661 470 aa15.63■□□□□ 0.09
TPM3-219ENST00000509409 EPHB2P29323 1055 aa15.63■□□□□ 0.09
TPM3-219ENST00000509409 RABIFP47224 123 aa15.63■□□□□ 0.09
TPM3-219ENST00000509409 HNRNPKP61978 463 aaKnown RBP eCLIP15.63■□□□□ 0.09
TPM3-219ENST00000509409 INSM1Q01101 510 aaPredicted RBP15.63■□□□□ 0.09
TPM3-219ENST00000509409 COL9A2Q14055 689 aaPredicted RBP15.63■□□□□ 0.09
TPM3-219ENST00000509409 STX1AQ16623 288 aa15.63■□□□□ 0.09
TPM3-219ENST00000509409 EFHC2Q5JST6 749 aa15.63■□□□□ 0.09
TPM3-219ENST00000509409 ATXN7L2Q5T6C5 722 aaPredicted RBP15.63■□□□□ 0.09
TPM3-219ENST00000509409 LRRC69Q6ZNQ3 347 aa15.63■□□□□ 0.09
TPM3-219ENST00000509409 TTC7BQ86TV6 843 aa15.63■□□□□ 0.09
TPM3-219ENST00000509409 ZSCAN30Q86W11 494 aa15.63■□□□□ 0.09
TPM3-219ENST00000509409 SLC22A18ASQ8N1D0 253 aa15.63■□□□□ 0.09
TPM3-219ENST00000509409 PYROXD2Q8N2H3 581 aa15.63■□□□□ 0.09
TPM3-219ENST00000509409 C3orf20Q8ND61 904 aa15.63■□□□□ 0.09
TPM3-219ENST00000509409 NTAN1Q96AB6 310 aa15.63■□□□□ 0.09
TPM3-219ENST00000509409 KLHL32Q96NJ5 620 aa15.63■□□□□ 0.09
TPM3-219ENST00000509409 NRSN2Q9GZP1 204 aa15.63■□□□□ 0.09
TPM3-219ENST00000509409 CAAP1Q9H8G2 361 aa15.63■□□□□ 0.09
TPM3-219ENST00000509409 ZFYVE26Q68DK2 2539 aa15.63■□□□□ 0.09
TPM3-219ENST00000509409 ZSCAN5CA6NGD5 496 aaPredicted RBP15.62■□□□□ 0.09
TPM3-219ENST00000509409 H3BM21 787 aa15.62■□□□□ 0.09
TPM3-219ENST00000509409 CCDC172P0C7W6 258 aa15.62■□□□□ 0.09
TPM3-219ENST00000509409 MYF5P13349 255 aa15.62■□□□□ 0.09
TPM3-219ENST00000509409 ABL2P42684 1182 aa15.62■□□□□ 0.09
TPM3-219ENST00000509409 DUSP3P51452 185 aaPredicted RBP15.62■□□□□ 0.09
TPM3-219ENST00000509409 GSCP56915 257 aaPredicted RBP15.62■□□□□ 0.09
TPM3-219ENST00000509409 DCUN1D2Q6PH85 259 aa15.62■□□□□ 0.09
TPM3-219ENST00000509409 GDPD4Q6W3E5 623 aa15.62■□□□□ 0.09
TPM3-219ENST00000509409 KYAT3Q6YP21 454 aaKnown RBP15.62■□□□□ 0.09
TPM3-219ENST00000509409 KDM7AQ6ZMT4 941 aa15.62■□□□□ 0.09
TPM3-219ENST00000509409 RBM43Q6ZSC3 357 aaKnown RBP15.62■□□□□ 0.09
TPM3-219ENST00000509409 LENG8Q96PV6 779 aaPredicted RBP15.62■□□□□ 0.09
TPM3-219ENST00000509409 DUSP23Q9BVJ7 150 aa15.62■□□□□ 0.09
TPM3-219ENST00000509409 C1QTNF2Q9BXJ5 285 aa15.62■□□□□ 0.09
TPM3-219ENST00000509409 OSBPL1AQ9BXW6 950 aa15.62■□□□□ 0.09
TPM3-219ENST00000509409 ABCG4Q9H172 646 aa15.62■□□□□ 0.09
TPM3-219ENST00000509409 EVA1BQ9NVM1 165 aa15.62■□□□□ 0.09
TPM3-219ENST00000509409 NLGN3Q9NZ94 848 aa15.62■□□□□ 0.09
TPM3-219ENST00000509409 ITM2BQ9Y287 266 aa15.62■□□□□ 0.09
TPM3-219ENST00000509409 ACACAQ13085 2346 aa15.62■□□□□ 0.09
TPM3-219ENST00000509409 COL5A1P20908 1838 aaPredicted RBP15.61■□□□□ 0.09
TPM3-219ENST00000509409 APC2O95996 2303 aa15.61■□□□□ 0.09
TPM3-219ENST00000509409 A0A087WV48 116 aa15.61■□□□□ 0.09
TPM3-219ENST00000509409 SCAMP1O15126 338 aa15.61■□□□□ 0.09
TPM3-219ENST00000509409 RRP8O43159 456 aaKnown RBP15.61■□□□□ 0.09
TPM3-219ENST00000509409 CCP110O43303 1012 aa15.61■□□□□ 0.09
TPM3-219ENST00000509409 NEBLO76041 1014 aa15.61■□□□□ 0.09
TPM3-219ENST00000509409 TMCC1O94876 653 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms