RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 LRRC8DQ7L1W4 858 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 SDCCAG8Q86SQ7 713 aaPredicted RBP2.56□□□□□ -2
DEPDC1B-204ENST00000509006 HERC6Q8IVU3 1022 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 HSCBQ8IWL3 235 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 UNC45BQ8IWX7 931 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 LAS2Q8IYD9 372 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 CEP57L1Q8IYX8 460 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 IPO4Q8TEX9 1081 aaKnown RBP2.56□□□□□ -2
DEPDC1B-204ENST00000509006 GLMPQ8WWB7 406 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 RSPH1Q8WYR4 309 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 INPP5DQ92835 1189 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 LRRC46Q96FV0 321 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 CALML4Q96GE6 196 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 CCDC34Q96HJ3 373 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 CCDC43Q96MW1 224 aaKnown RBP2.56□□□□□ -2
DEPDC1B-204ENST00000509006 TRAPPC9Q96Q05 1148 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 YME1L1Q96TA2 773 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 EYA3Q99504 573 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 NCAPGQ9BPX3 1015 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 EDEM3Q9BZQ6 932 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 BRD8Q9H0E9 1235 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 GHITMQ9H3K2 345 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 TSPY26PQ9H489 355 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 CDCP1Q9H5V8 836 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 VEZTQ9HBM0 779 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 ERVK-5Q9HDB9 667 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 PLSCR4Q9NRQ2 329 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 ABCF3Q9NUQ8 709 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 GGA3Q9NZ52 723 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 NDUFAF4Q9P032 175 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 EPS15L1Q9UBC2 864 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 MTRRQ9UBK8 725 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 RPS6KA6Q9UK32 745 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 FEM1BQ9UK73 627 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 DERAQ9Y315 318 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 LYVE1Q9Y5Y7 322 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 M0QZQ0 153 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 MDM4O15151 490 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 ASNA1O43681 348 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 CCNT2O60583 730 aaKnown RBP2.55□□□□□ -2
DEPDC1B-204ENST00000509006 ZNF432O94892 652 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 TFRCP02786 760 aaKnown RBP2.55□□□□□ -2
DEPDC1B-204ENST00000509006 HNRNPA1P09651 372 aaKnown RBP eCLIP2.55□□□□□ -2
DEPDC1B-204ENST00000509006 RFPL3SP0C7P2 107 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 FAM200BP0CF97 657 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 TNNT1P13805 278 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 AKR1A1P14550 325 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 EGR1P18146 543 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 RXRAP19793 462 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 DRD1P21728 446 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 YY1P25490 414 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 MST1P26927 711 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 HOXD13P35453 343 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 NNMTP40261 264 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 MLH1P40692 756 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 AGTR2P50052 363 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 ZNF131P52739 623 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 SNX16P57768 344 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 ACVR2BQ13705 512 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 RASA2Q15283 850 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 RPS6KA2Q15349 733 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 TSTQ16762 297 aaKnown RBP2.55□□□□□ -2
DEPDC1B-204ENST00000509006 TMEM266Q2M3C6 531 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 TMEM196Q5HYL7 178 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.55□□□□□ -2
DEPDC1B-204ENST00000509006 KIAA1755Q5JYT7 1200 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 CCDC158Q5M9N0 1113 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 FAXCQ5TGI0 409 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 LIPMQ5VYY2 423 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 ATG16L1Q676U5 607 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 ACSM6Q6P461 480 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 CYP20A1Q6UW02 462 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 ATF7IPQ6VMQ6 1270 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 GALNTL5Q7Z4T8 443 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 R3HCC1LQ7Z5L2 792 aaKnown RBP2.55□□□□□ -2
DEPDC1B-204ENST00000509006 GALNT13Q8IUC8 556 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 RASGRP3Q8IV61 690 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 SLC44A2Q8IWA5 706 aaPredicted RBP2.55□□□□□ -2
DEPDC1B-204ENST00000509006 DDIASQ8IXT1 998 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 ADSSL1Q8N142 457 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 TMCO5AQ8N6Q1 288 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 ARL6IP6Q8N6S5 226 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 TEX9Q8N6V9 391 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 OR52L2PQ8NGH6 319 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 GSDMBQ8TAX9 411 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 ETNPPLQ8TBG4 499 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 ELP5Q8TE02 316 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 STYXQ8WUJ0 223 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 TMEM174Q8WUU8 243 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 LPAR1Q92633 364 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 KAT2BQ92831 832 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 C3orf49Q96BT1 292 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 PHF21BQ96EK2 531 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 RNF125Q96EQ8 232 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 RSF1Q96T23 1441 aaPredicted RBP2.55□□□□□ -2
DEPDC1B-204ENST00000509006 MAK16Q9BXY0 300 aaKnown RBP2.55□□□□□ -2
DEPDC1B-204ENST00000509006 TP63Q9H3D4 680 aaPredicted RBP2.55□□□□□ -2
DEPDC1B-204ENST00000509006 AAMDCQ9H7C9 122 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 ERVMER34-1Q9H9K5 563 aa2.55□□□□□ -2
DEPDC1B-204ENST00000509006 GRPEL1Q9HAV7 217 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms