RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 BNIP3Q12983 259 aa8.89□□□□□ -0.99
COL4A3BP-206ENST00000508809 TARDBPQ13148 414 aaKnown RBP eCLIP8.89□□□□□ -0.99
COL4A3BP-206ENST00000508809 CNGA2Q16280 664 aa8.89□□□□□ -0.99
COL4A3BP-206ENST00000508809 FSCBQ5H9T9 825 aa8.89□□□□□ -0.99
COL4A3BP-206ENST00000508809 SFMBT2Q5VUG0 894 aa8.89□□□□□ -0.99
COL4A3BP-206ENST00000508809 NADSYN1Q6IA69 706 aa8.89□□□□□ -0.99
COL4A3BP-206ENST00000508809 PMF1Q6P1K2 205 aa8.89□□□□□ -0.99
COL4A3BP-206ENST00000508809 KANSL1Q7Z3B3 1105 aa8.89□□□□□ -0.99
COL4A3BP-206ENST00000508809 MMAAQ8IVH4 418 aaKnown RBP8.89□□□□□ -0.99
COL4A3BP-206ENST00000508809 MFN1Q8IWA4 741 aa8.89□□□□□ -0.99
COL4A3BP-206ENST00000508809 DHX40Q8IX18 779 aaKnown RBP8.89□□□□□ -0.99
COL4A3BP-206ENST00000508809 SIX6OS1Q8N1H7 587 aa8.89□□□□□ -0.99
COL4A3BP-206ENST00000508809 EID2Q8N6I1 236 aa8.89□□□□□ -0.99
COL4A3BP-206ENST00000508809 MFSD2AQ8NA29 543 aa8.89□□□□□ -0.99
COL4A3BP-206ENST00000508809 KCT2Q8NC54 265 aa8.89□□□□□ -0.99
COL4A3BP-206ENST00000508809 HJURPQ8NCD3 748 aaPredicted RBP8.89□□□□□ -0.99
COL4A3BP-206ENST00000508809 PIP4K2CQ8TBX8 421 aa8.89□□□□□ -0.99
COL4A3BP-206ENST00000508809 PTPRN2Q92932 1015 aa8.89□□□□□ -0.99
COL4A3BP-206ENST00000508809 CCDC47Q96A33 483 aaKnown RBP8.89□□□□□ -0.99
COL4A3BP-206ENST00000508809 MYEOVQ96EZ4 313 aa8.89□□□□□ -0.99
COL4A3BP-206ENST00000508809 SLC39A13Q96H72 371 aa8.89□□□□□ -0.99
COL4A3BP-206ENST00000508809 HSFY1Q96LI6 401 aa8.89□□□□□ -0.99
COL4A3BP-206ENST00000508809 GDF3Q9NR23 364 aa8.89□□□□□ -0.99
COL4A3BP-206ENST00000508809 ARHGAP20Q9P2F6 1191 aa8.89□□□□□ -0.99
COL4A3BP-206ENST00000508809 ERVW-1Q9UQF0 538 aa8.89□□□□□ -0.99
COL4A3BP-206ENST00000508809 RAI2Q9Y5P3 530 aa8.89□□□□□ -0.99
COL4A3BP-206ENST00000508809 NYNRINQ9P2P1 1898 aaKnown RBP8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 EDDM13A0A1B0GTR0 161 aa8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 FAM47DPA6NHR8 397 aa8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 TTC34A8MYJ7 566 aa8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 FANCGO15287 622 aa8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 RNASEH2AO75792 299 aaKnown RBP8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 LTFP02788 710 aa8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 PRB1P04280 392 aa8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 PAEPP09466 180 aa8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 EPB41P11171 864 aaKnown RBP8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 LCP1P13796 627 aa8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 CKMT2P17540 419 aa8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 C5AR1P21730 350 aa8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 RPL34P49207 117 aaKnown RBP8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 ARRB1P49407 418 aaPredicted RBP8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 NDUFA8P51970 172 aa8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 ADPRHP54922 357 aa8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 CLDN6P56747 220 aa8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 TBX4P57082 545 aa8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 NXPH1P58417 271 aa8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 YWHAEP62258 255 aaKnown RBP8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 RPS24P62847 133 aaKnown RBP8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 SEMG2Q02383 582 aa8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 PKP1Q13835 747 aa8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 MS4A13Q5J8X5 152 aa8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 PITRM1Q5JRX3 1037 aa8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 HES3Q5TGS1 186 aa8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 OGFOD3Q6PK18 319 aa8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 SEZ6L2Q6UXD5 910 aa8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 IQCHQ86VS3 1027 aa8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 DTX1Q86Y01 620 aa8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 OXR1Q8N573 874 aa8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 AADATQ8N5Z0 425 aa8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 GANCQ8TET4 914 aa8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 TFAP2BQ92481 460 aa8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 FGF11Q92914 225 aa8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 FCRL2Q96LA5 508 aaPredicted RBP8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 PRICKLE1Q96MT3 831 aaPredicted RBP8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 OMDQ99983 421 aa8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 DDX50Q9BQ39 737 aaKnown RBP8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 ZSWIM1Q9BR11 485 aa8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 LRRC4CQ9HCJ2 640 aa8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 AASDHPPTQ9NRN7 309 aa8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 C1GALT1Q9NS00 363 aa8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 SLCO3A1Q9UIG8 710 aa8.88□□□□□ -0.99
COL4A3BP-206ENST00000508809 TENM4Q6N022 2769 aa8.87□□□□□ -0.99
COL4A3BP-206ENST00000508809 TRPM6Q9BX84 2022 aa8.87□□□□□ -0.99
COL4A3BP-206ENST00000508809 PMM2O15305 246 aa8.87□□□□□ -0.99
COL4A3BP-206ENST00000508809 SLC16A3O15427 465 aaKnown RBP8.87□□□□□ -0.99
COL4A3BP-206ENST00000508809 RRP8O43159 456 aaKnown RBP8.87□□□□□ -0.99
COL4A3BP-206ENST00000508809 FBXO21O94952 628 aa8.87□□□□□ -0.99
COL4A3BP-206ENST00000508809 WNT11O96014 354 aa8.87□□□□□ -0.99
COL4A3BP-206ENST00000508809 CD19P15391 556 aa8.87□□□□□ -0.99
COL4A3BP-206ENST00000508809 TBXAS1P24557 533 aaPredicted RBP8.87□□□□□ -0.99
COL4A3BP-206ENST00000508809 ACP1P24666 158 aa8.87□□□□□ -0.99
COL4A3BP-206ENST00000508809 NUDT1P36639 197 aa8.87□□□□□ -0.99
COL4A3BP-206ENST00000508809 ST13P50502 369 aaKnown RBP8.87□□□□□ -0.99
COL4A3BP-206ENST00000508809 ECT2LQ008S8 904 aa8.87□□□□□ -0.99
COL4A3BP-206ENST00000508809 OVGP1Q12889 678 aa8.87□□□□□ -0.99
COL4A3BP-206ENST00000508809 STILQ15468 1287 aa8.87□□□□□ -0.99
COL4A3BP-206ENST00000508809 COBLL1Q53SF7 1204 aa8.87□□□□□ -0.99
COL4A3BP-206ENST00000508809 DCAF6Q58WW2 860 aa8.87□□□□□ -0.99
COL4A3BP-206ENST00000508809 SLC45A4Q5BKX6 768 aa8.87□□□□□ -0.99
COL4A3BP-206ENST00000508809 TMCO4Q5TGY1 634 aa8.87□□□□□ -0.99
COL4A3BP-206ENST00000508809 PCSK4Q6UW60 755 aa8.87□□□□□ -0.99
COL4A3BP-206ENST00000508809 KRBA2Q6ZNG9 492 aa8.87□□□□□ -0.99
COL4A3BP-206ENST00000508809 MMS22LQ6ZRQ5 1243 aa8.87□□□□□ -0.99
COL4A3BP-206ENST00000508809 ZNF765Q7L2R6 523 aa8.87□□□□□ -0.99
COL4A3BP-206ENST00000508809 BEND5Q7L4P6 421 aa8.87□□□□□ -0.99
COL4A3BP-206ENST00000508809 HDXQ7Z353 690 aa8.87□□□□□ -0.99
COL4A3BP-206ENST00000508809 SPATS2Q86XZ4 545 aaKnown RBP8.87□□□□□ -0.99
COL4A3BP-206ENST00000508809 STK40Q8N2I9 435 aa8.87□□□□□ -0.99
COL4A3BP-206ENST00000508809 CARNMT1Q8N4J0 409 aa8.87□□□□□ -0.99
COL4A3BP-206ENST00000508809 DCBLD1Q8N8Z6 715 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms