RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 SNX21Q969T3 373 aa9.58□□□□□ -0.88
NEDD9-211ENST00000508546 SLC2A13Q96QE2 648 aa9.58□□□□□ -0.88
NEDD9-211ENST00000508546 TSG101Q99816 390 aa9.58□□□□□ -0.88
NEDD9-211ENST00000508546 CCDC3Q9BQI4 270 aa9.58□□□□□ -0.88
NEDD9-211ENST00000508546 C1QTNF2Q9BXJ5 285 aa9.58□□□□□ -0.88
NEDD9-211ENST00000508546 MUC3BQ9H195 1237 aa9.58□□□□□ -0.88
NEDD9-211ENST00000508546 FAM204AQ9H8W3 233 aa9.58□□□□□ -0.88
NEDD9-211ENST00000508546 ASNSD1Q9NWL6 643 aa9.58□□□□□ -0.88
NEDD9-211ENST00000508546 PADI4Q9UM07 663 aa9.58□□□□□ -0.88
NEDD9-211ENST00000508546 FADS3Q9Y5Q0 445 aa9.58□□□□□ -0.88
NEDD9-211ENST00000508546 HS3ST4Q9Y661 456 aa9.58□□□□□ -0.88
NEDD9-211ENST00000508546 WASF2Q9Y6W5 498 aa9.58□□□□□ -0.88
NEDD9-211ENST00000508546 SDK2Q58EX2 2172 aa9.58□□□□□ -0.88
NEDD9-211ENST00000508546 SETD2Q9BYW2 2564 aaPredicted RBP9.57□□□□□ -0.88
NEDD9-211ENST00000508546 CASC3O15234 703 aaKnown RBP9.57□□□□□ -0.88
NEDD9-211ENST00000508546 NVLO15381 856 aaKnown RBP9.57□□□□□ -0.88
NEDD9-211ENST00000508546 P4HA2O15460 535 aa9.57□□□□□ -0.88
NEDD9-211ENST00000508546 MED7O43513 233 aa9.57□□□□□ -0.88
NEDD9-211ENST00000508546 ZNF821O75541 412 aaPredicted RBP9.57□□□□□ -0.88
NEDD9-211ENST00000508546 GCATO75600 419 aa9.57□□□□□ -0.88
NEDD9-211ENST00000508546 ANXA6P08133 673 aa9.57□□□□□ -0.88
NEDD9-211ENST00000508546 RHOCP08134 193 aa9.57□□□□□ -0.88
NEDD9-211ENST00000508546 L1CAMP32004 1257 aa9.57□□□□□ -0.88
NEDD9-211ENST00000508546 CCKBRP32239 447 aa9.57□□□□□ -0.88
NEDD9-211ENST00000508546 UGT1A5P35504 534 aa9.57□□□□□ -0.88
NEDD9-211ENST00000508546 RECQLP46063 649 aaPredicted RBP9.57□□□□□ -0.88
NEDD9-211ENST00000508546 ADKP55263 362 aaKnown RBP9.57□□□□□ -0.88
NEDD9-211ENST00000508546 LRRC63Q05C16 580 aa9.57□□□□□ -0.88
NEDD9-211ENST00000508546 C1QBPQ07021 282 aaKnown RBP9.57□□□□□ -0.88
NEDD9-211ENST00000508546 SRSF6Q13247 344 aaKnown RBP9.57□□□□□ -0.88
NEDD9-211ENST00000508546 SGCGQ13326 291 aa9.57□□□□□ -0.88
NEDD9-211ENST00000508546 PTK2BQ14289 1009 aa9.57□□□□□ -0.88
NEDD9-211ENST00000508546 TAF5Q15542 800 aa9.57□□□□□ -0.88
NEDD9-211ENST00000508546 TGIF1Q15583 401 aa9.57□□□□□ -0.88
NEDD9-211ENST00000508546 SKIDA1Q1XH10 827 aa9.57□□□□□ -0.88
NEDD9-211ENST00000508546 PRRT3Q5FWE3 981 aa9.57□□□□□ -0.88
NEDD9-211ENST00000508546 TPRG1LQ5T0D9 272 aa9.57□□□□□ -0.88
NEDD9-211ENST00000508546 ANKRD40Q6AI12 368 aa9.57□□□□□ -0.88
NEDD9-211ENST00000508546 ESRP1Q6NXG1 681 aaKnown RBP9.57□□□□□ -0.88
NEDD9-211ENST00000508546 DENND1BQ6P3S1 775 aa9.57□□□□□ -0.88
NEDD9-211ENST00000508546 C22orf39Q6P5X5 142 aa9.57□□□□□ -0.88
NEDD9-211ENST00000508546 DPY19L3Q6ZPD9 716 aa9.57□□□□□ -0.88
NEDD9-211ENST00000508546 RAB11FIP2Q7L804 512 aa9.57□□□□□ -0.88
NEDD9-211ENST00000508546 SETD3Q86TU7 594 aaPredicted RBP9.57□□□□□ -0.88
NEDD9-211ENST00000508546 PHACTR4Q8IZ21 702 aa9.57□□□□□ -0.88
NEDD9-211ENST00000508546 RBFAQ8N0V3 343 aa9.57□□□□□ -0.88
NEDD9-211ENST00000508546 DEFB106AQ8N104 65 aa9.57□□□□□ -0.88
NEDD9-211ENST00000508546 GRIN3AQ8TCU5 1115 aa9.57□□□□□ -0.88
NEDD9-211ENST00000508546 RAB7BQ96AH8 199 aa9.57□□□□□ -0.88
NEDD9-211ENST00000508546 STRADBQ9C0K7 418 aa9.57□□□□□ -0.88
NEDD9-211ENST00000508546 LRRC4CQ9HCJ2 640 aa9.57□□□□□ -0.88
NEDD9-211ENST00000508546 APOBEC3BQ9UH17 382 aaKnown RBP9.57□□□□□ -0.88
NEDD9-211ENST00000508546 ZFC3H1O60293 1989 aaKnown RBP9.57□□□□□ -0.88
NEDD9-211ENST00000508546 OTOGQ6ZRI0 2925 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 SYNJ2BP-COX16A0A087WUM0 186 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 IGLON5A6NGN9 336 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 D6RAR5 112 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 TOR1BO14657 336 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 YY2O15391 372 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 TSPAN6O43657 245 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 HSF2BPO75031 334 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 PPFIA2O75334 1257 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 PAGE1O75459 146 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 CNTN5O94779 1100 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 GGCXP38435 758 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 THOP1P52888 689 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 PMS1P54277 932 aaKnown RBP9.56□□□□□ -0.88
NEDD9-211ENST00000508546 YPEL5P62699 121 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 SLC20A2Q08357 652 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 CETN1Q12798 172 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 PDCLQ13371 301 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 ALFQ53S48 1182 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 EFHC1Q5JVL4 640 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 LVRNQ6Q4G3 990 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 PARS2Q7L3T8 475 aaKnown RBP9.56□□□□□ -0.88
NEDD9-211ENST00000508546 RRAGAQ7L523 313 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 B3GNT8Q7Z7M8 397 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 JAMLQ86YT9 394 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 ARHGEF19Q8IW93 802 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 ZNF683Q8IZ20 524 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 PCDH20Q8N6Y1 951 aaKnown RBP9.56□□□□□ -0.88
NEDD9-211ENST00000508546 ZNF606Q8WXB4 792 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 SPATA32Q96LK8 384 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 KREMEN1Q96MU8 473 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 TMEM74Q96NL1 305 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 HEPHQ9BQS7 1158 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 LRRC61Q9BV99 259 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 SLC13A1Q9BZW2 595 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 CEP44Q9C0F1 390 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 CLPBQ9H078 707 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 SLC25A18Q9H1K4 315 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 TNKS2Q9H2K2 1166 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 TCEAL2Q9H3H9 227 aaPredicted RBP9.56□□□□□ -0.88
NEDD9-211ENST00000508546 EPB41L5Q9HCM4 733 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 GEMIN8Q9NWZ8 242 aaKnown RBP9.56□□□□□ -0.88
NEDD9-211ENST00000508546 COX16Q9P0S2 106 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 SEPT10Q9P0V9 454 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 PCDHGA4Q9Y5G9 962 aa9.56□□□□□ -0.88
NEDD9-211ENST00000508546 ZFHX3Q15911 3703 aa9.55□□□□□ -0.88
NEDD9-211ENST00000508546 ANKRD36A6QL64 1941 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms