RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 YWHAQP27348 245 aa5.57□□□□□ -1.52
TOPBP1-206ENST00000508524 TRAPPC10P48553 1259 aa5.57□□□□□ -1.52
TOPBP1-206ENST00000508524 KIF5AQ12840 1032 aa5.57□□□□□ -1.52
TOPBP1-206ENST00000508524 TRAF3Q13114 568 aa5.57□□□□□ -1.52
TOPBP1-206ENST00000508524 SH2D4BQ5SQS7 431 aa5.57□□□□□ -1.52
TOPBP1-206ENST00000508524 C10orf62Q5T681 223 aaPredicted RBP5.57□□□□□ -1.52
TOPBP1-206ENST00000508524 MOGAT3Q86VF5 341 aa5.57□□□□□ -1.52
TOPBP1-206ENST00000508524 TMC8Q8IU68 726 aa5.57□□□□□ -1.52
TOPBP1-206ENST00000508524 RBFAQ8N0V3 343 aa5.57□□□□□ -1.52
TOPBP1-206ENST00000508524 MIGA1Q8NAN2 632 aa5.57□□□□□ -1.52
TOPBP1-206ENST00000508524 LMO3Q8TAP4 145 aa5.57□□□□□ -1.52
TOPBP1-206ENST00000508524 ATOH1Q92858 354 aaPredicted RBP5.57□□□□□ -1.52
TOPBP1-206ENST00000508524 RBM17Q96I25 401 aaKnown RBP5.57□□□□□ -1.52
TOPBP1-206ENST00000508524 PAGR1Q9BTK6 254 aa5.57□□□□□ -1.52
TOPBP1-206ENST00000508524 KIF17Q9P2E2 1029 aa5.57□□□□□ -1.52
TOPBP1-206ENST00000508524 CLDN16Q9Y5I7 305 aa5.57□□□□□ -1.52
TOPBP1-206ENST00000508524 DIP2BQ9P265 1576 aa5.57□□□□□ -1.52
TOPBP1-206ENST00000508524 MAGI1Q96QZ7 1491 aaPredicted RBP5.57□□□□□ -1.52
TOPBP1-206ENST00000508524 CEP170Q5SW79 1584 aa5.56□□□□□ -1.52
TOPBP1-206ENST00000508524 EYA2O00167 538 aa5.56□□□□□ -1.52
TOPBP1-206ENST00000508524 FCGR1AP12314 374 aa5.56□□□□□ -1.52
TOPBP1-206ENST00000508524 ZNF12P17014 697 aa5.56□□□□□ -1.52
TOPBP1-206ENST00000508524 DCTDP32321 178 aa5.56□□□□□ -1.52
TOPBP1-206ENST00000508524 ART1P52961 327 aa5.56□□□□□ -1.52
TOPBP1-206ENST00000508524 ACTR2P61160 394 aa5.56□□□□□ -1.52
TOPBP1-206ENST00000508524 CBWD5Q5RIA9 395 aa5.56□□□□□ -1.52
TOPBP1-206ENST00000508524 NAPEPLDQ6IQ20 393 aa5.56□□□□□ -1.52
TOPBP1-206ENST00000508524 MON1BQ7L1V2 547 aa5.56□□□□□ -1.52
TOPBP1-206ENST00000508524 PALB2Q86YC2 1186 aa5.56□□□□□ -1.52
TOPBP1-206ENST00000508524 OR14A16Q8NHC5 309 aa5.56□□□□□ -1.52
TOPBP1-206ENST00000508524 AFG1LQ8WV93 481 aa5.56□□□□□ -1.52
TOPBP1-206ENST00000508524 RNFT2Q96EX2 444 aa5.56□□□□□ -1.52
TOPBP1-206ENST00000508524 PPP1R10Q96QC0 940 aaKnown RBP5.56□□□□□ -1.52
TOPBP1-206ENST00000508524 NPFFR1Q9GZQ6 430 aa5.56□□□□□ -1.52
TOPBP1-206ENST00000508524 C6orf106Q9H6K1 298 aaPredicted RBP5.56□□□□□ -1.52
TOPBP1-206ENST00000508524 ATP8A2Q9NTI2 1148 aa5.56□□□□□ -1.52
TOPBP1-206ENST00000508524 FEM1BQ9UK73 627 aa5.56□□□□□ -1.52
TOPBP1-206ENST00000508524 DERAQ9Y315 318 aa5.56□□□□□ -1.52
TOPBP1-206ENST00000508524 TOP2AP11388 1531 aaKnown RBP5.56□□□□□ -1.52
TOPBP1-206ENST00000508524 IGHV4-28A0A0C4DH34 117 aa5.55□□□□□ -1.52
TOPBP1-206ENST00000508524 hCG_1642624A0A1W2PR95 340 aa5.55□□□□□ -1.52
TOPBP1-206ENST00000508524 FAM157AC9JC47 383 aa5.55□□□□□ -1.52
TOPBP1-206ENST00000508524 KIF1CO43896 1103 aaKnown RBP5.55□□□□□ -1.52
TOPBP1-206ENST00000508524 HBP1O60381 514 aa5.55□□□□□ -1.52
TOPBP1-206ENST00000508524 TNNT1P13805 278 aa5.55□□□□□ -1.52
TOPBP1-206ENST00000508524 SEC61A1P61619 476 aaKnown RBP5.55□□□□□ -1.52
TOPBP1-206ENST00000508524 MYBPC2Q14324 1141 aa5.55□□□□□ -1.52
TOPBP1-206ENST00000508524 PDCD2Q16342 344 aaPredicted RBP5.55□□□□□ -1.52
TOPBP1-206ENST00000508524 ME3Q16798 604 aa5.55□□□□□ -1.52
TOPBP1-206ENST00000508524 PRSS57Q6UWY2 283 aa5.55□□□□□ -1.52
TOPBP1-206ENST00000508524 FJX1Q86VR8 437 aa5.55□□□□□ -1.52
TOPBP1-206ENST00000508524 SUGP1Q8IWZ8 645 aaKnown RBP5.55□□□□□ -1.52
TOPBP1-206ENST00000508524 SPPL3Q8TCT6 385 aa5.55□□□□□ -1.52
TOPBP1-206ENST00000508524 GPT2Q8TD30 523 aa5.55□□□□□ -1.52
TOPBP1-206ENST00000508524 FAM216AQ8WUB2 273 aa5.55□□□□□ -1.52
TOPBP1-206ENST00000508524 FAM167BQ9BTA0 163 aa5.55□□□□□ -1.52
TOPBP1-206ENST00000508524 MSTO1Q9BUK6 570 aa5.55□□□□□ -1.52
TOPBP1-206ENST00000508524 CDT1Q9H211 546 aa5.55□□□□□ -1.52
TOPBP1-206ENST00000508524 WDR6Q9NNW5 1121 aaKnown RBP5.55□□□□□ -1.52
TOPBP1-206ENST00000508524 DHX16O60231 1041 aaKnown RBP5.54□□□□□ -1.52
TOPBP1-206ENST00000508524 CD72P21854 359 aa5.54□□□□□ -1.52
TOPBP1-206ENST00000508524 HNF1BP35680 557 aa5.54□□□□□ -1.52
TOPBP1-206ENST00000508524 GRK6P43250 576 aa5.54□□□□□ -1.52
TOPBP1-206ENST00000508524 GPR12P47775 334 aa5.54□□□□□ -1.52
TOPBP1-206ENST00000508524 RRP1P56182 461 aaKnown RBP5.54□□□□□ -1.52
TOPBP1-206ENST00000508524 BNC1Q01954 994 aa5.54□□□□□ -1.52
TOPBP1-206ENST00000508524 TRAF2Q12933 501 aa5.54□□□□□ -1.52
TOPBP1-206ENST00000508524 CTTNQ14247 550 aaKnown RBP5.54□□□□□ -1.52
TOPBP1-206ENST00000508524 PLCB4Q15147 1175 aa5.54□□□□□ -1.52
TOPBP1-206ENST00000508524 FBXO43Q4G163 708 aa5.54□□□□□ -1.52
TOPBP1-206ENST00000508524 CTXN3Q4LDR2 81 aa5.54□□□□□ -1.52
TOPBP1-206ENST00000508524 C9orf57Q5W0N0 161 aa5.54□□□□□ -1.52
TOPBP1-206ENST00000508524 NCAPH2Q6IBW4 605 aa5.54□□□□□ -1.52
TOPBP1-206ENST00000508524 DENND1BQ6P3S1 775 aa5.54□□□□□ -1.52
TOPBP1-206ENST00000508524 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.54□□□□□ -1.522e-7■■■■□ 23.8
TOPBP1-206ENST00000508524 C16orf82Q7Z2V1 217 aa5.54□□□□□ -1.52
TOPBP1-206ENST00000508524 ARMC9Q7Z3E5 817 aa5.54□□□□□ -1.52
TOPBP1-206ENST00000508524 PATL1Q86TB9 770 aaKnown RBP5.54□□□□□ -1.52
TOPBP1-206ENST00000508524 TMEM57Q8N5G2 664 aa5.54□□□□□ -1.52
TOPBP1-206ENST00000508524 LMLNQ96KR4 655 aa5.54□□□□□ -1.52
TOPBP1-206ENST00000508524 NPLQ9BXD5 320 aaPredicted RBP5.54□□□□□ -1.52
TOPBP1-206ENST00000508524 MVB12BQ9H7P6 319 aa5.54□□□□□ -1.52
TOPBP1-206ENST00000508524 RASSF1Q9NS23 344 aa5.54□□□□□ -1.52
TOPBP1-206ENST00000508524 DNAJC16Q9Y2G8 782 aa5.54□□□□□ -1.52
TOPBP1-206ENST00000508524 PCDHGB1Q9Y5G3 927 aa5.54□□□□□ -1.52
TOPBP1-206ENST00000508524 SOGA1O94964 1423 aa5.54□□□□□ -1.52
TOPBP1-206ENST00000508524 GRIN2BQ13224 1484 aa5.53□□□□□ -1.52
TOPBP1-206ENST00000508524 A0A096LPK6 155 aa5.53□□□□□ -1.52
TOPBP1-206ENST00000508524 IFITM10A6NMD0 228 aa5.53□□□□□ -1.52
TOPBP1-206ENST00000508524 ITM2AO43736 263 aa5.53□□□□□ -1.52
TOPBP1-206ENST00000508524 SERPINC1P01008 464 aa5.53□□□□□ -1.52
TOPBP1-206ENST00000508524 CKMT1AP12532 417 aa5.53□□□□□ -1.52
TOPBP1-206ENST00000508524 SLC18A2Q05940 514 aa5.53□□□□□ -1.52
TOPBP1-206ENST00000508524 CREB3L2Q70SY1 520 aa5.53□□□□□ -1.52
TOPBP1-206ENST00000508524 HERC6Q8IVU3 1022 aa5.53□□□□□ -1.52
TOPBP1-206ENST00000508524 FTSJ3Q8IY81 847 aaKnown RBP5.53□□□□□ -1.52
TOPBP1-206ENST00000508524 TMED6Q8WW62 240 aa5.53□□□□□ -1.52
TOPBP1-206ENST00000508524 AGO1Q9UL18 857 aaKnown RBP5.53□□□□□ -1.52
TOPBP1-206ENST00000508524 MORC2Q9Y6X9 1032 aaPredicted RBP5.53□□□□□ -1.52
TOPBP1-206ENST00000508524 ABCC8Q09428 1581 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms