RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 IL25Q9H293 177 aa4.86□□□□□ -1.63
UBE2D3-225ENST00000508476 CLK4Q9HAZ1 481 aaKnown RBP4.86□□□□□ -1.63
UBE2D3-225ENST00000508476 ATP8A2Q9NTI2 1148 aa4.86□□□□□ -1.63
UBE2D3-225ENST00000508476 ZNF112Q9UJU3 913 aa4.86□□□□□ -1.63
UBE2D3-225ENST00000508476 IGLV5-52A0A0A0MRZ9 124 aa4.85□□□□□ -1.63
UBE2D3-225ENST00000508476 A0A1B0GUV1 79 aa4.85□□□□□ -1.63
UBE2D3-225ENST00000508476 SMTNL1A8MU46 457 aa4.85□□□□□ -1.63
UBE2D3-225ENST00000508476 DHX16O60231 1041 aaKnown RBP4.85□□□□□ -1.63
UBE2D3-225ENST00000508476 IL1AP01583 271 aa4.85□□□□□ -1.63
UBE2D3-225ENST00000508476 TK1P04183 234 aa4.85□□□□□ -1.63
UBE2D3-225ENST00000508476 MCM2P49736 904 aa4.85□□□□□ -1.63
UBE2D3-225ENST00000508476 MXI1P50539 228 aa4.85□□□□□ -1.63
UBE2D3-225ENST00000508476 RHBDL3P58872 404 aa4.85□□□□□ -1.63
UBE2D3-225ENST00000508476 KRTAP10-7P60409 375 aaPredicted RBP4.85□□□□□ -1.63
UBE2D3-225ENST00000508476 SEC61A1P61619 476 aaKnown RBP4.85□□□□□ -1.63
UBE2D3-225ENST00000508476 EEF1A2Q05639 463 aaKnown RBP4.85□□□□□ -1.63
UBE2D3-225ENST00000508476 TAF5Q15542 800 aa4.85□□□□□ -1.63
UBE2D3-225ENST00000508476 CBWD5Q5RIA9 395 aa4.85□□□□□ -1.63
UBE2D3-225ENST00000508476 GJB7Q6PEY0 223 aa4.85□□□□□ -1.63
UBE2D3-225ENST00000508476 TMC8Q8IU68 726 aa4.85□□□□□ -1.63
UBE2D3-225ENST00000508476 FAM216AQ8WUB2 273 aa4.85□□□□□ -1.63
UBE2D3-225ENST00000508476 TRAPPC12Q8WVT3 735 aa4.85□□□□□ -1.63
UBE2D3-225ENST00000508476 TXNDC15Q96J42 360 aa4.85□□□□□ -1.63
UBE2D3-225ENST00000508476 PPP1R10Q96QC0 940 aaKnown RBP4.85□□□□□ -1.63
UBE2D3-225ENST00000508476 SLC25A33Q9BSK2 321 aa4.85□□□□□ -1.63
UBE2D3-225ENST00000508476 FAM167BQ9BTA0 163 aa4.85□□□□□ -1.63
UBE2D3-225ENST00000508476 PAGR1Q9BTK6 254 aa4.85□□□□□ -1.63
UBE2D3-225ENST00000508476 KIF17Q9P2E2 1029 aa4.85□□□□□ -1.63
UBE2D3-225ENST00000508476 CD207Q9UJ71 328 aa4.85□□□□□ -1.63
UBE2D3-225ENST00000508476 FEM1BQ9UK73 627 aa4.85□□□□□ -1.63
UBE2D3-225ENST00000508476 DERAQ9Y315 318 aa4.85□□□□□ -1.63
UBE2D3-225ENST00000508476 A0A087WYN8 130 aa4.84□□□□□ -1.63
UBE2D3-225ENST00000508476 A0A096LPK6 155 aa4.84□□□□□ -1.63
UBE2D3-225ENST00000508476 TIMM23O14925 209 aa4.84□□□□□ -1.63
UBE2D3-225ENST00000508476 HBP1O60381 514 aa4.84□□□□□ -1.63
UBE2D3-225ENST00000508476 ADAP00813 363 aa4.84□□□□□ -1.63
UBE2D3-225ENST00000508476 C21orf33P30042 268 aaPredicted RBP4.84□□□□□ -1.63
UBE2D3-225ENST00000508476 HNF1BP35680 557 aa4.84□□□□□ -1.63
UBE2D3-225ENST00000508476 ERVFC1-1P60608 527 aa4.84□□□□□ -1.63
UBE2D3-225ENST00000508476 ACTR2P61160 394 aa4.84□□□□□ -1.63
UBE2D3-225ENST00000508476 SLC18A2Q05940 514 aa4.84□□□□□ -1.63
UBE2D3-225ENST00000508476 CAPSQ13938 189 aa4.84□□□□□ -1.63
UBE2D3-225ENST00000508476 HLFQ16534 295 aa4.84□□□□□ -1.63
UBE2D3-225ENST00000508476 H1FNTQ75WM6 255 aaPredicted RBP4.84□□□□□ -1.63
UBE2D3-225ENST00000508476 TBC1D22AQ8WUA7 517 aa4.84□□□□□ -1.63
UBE2D3-225ENST00000508476 SDCCAG3Q96C92 435 aa4.84□□□□□ -1.63
UBE2D3-225ENST00000508476 RTP4Q96DX8 246 aa4.84□□□□□ -1.63
UBE2D3-225ENST00000508476 C1QTNF4Q9BXJ3 329 aa4.84□□□□□ -1.63
UBE2D3-225ENST00000508476 ZNF556Q9HAH1 456 aa4.84□□□□□ -1.63
UBE2D3-225ENST00000508476 FBXO40Q9UH90 709 aa4.84□□□□□ -1.63
UBE2D3-225ENST00000508476 AGO1Q9UL18 857 aaKnown RBP4.84□□□□□ -1.63
UBE2D3-225ENST00000508476 DNAJC16Q9Y2G8 782 aa4.84□□□□□ -1.63
UBE2D3-225ENST00000508476 CKAP5Q14008 2032 aa4.84□□□□□ -1.64
UBE2D3-225ENST00000508476 DYTNA2CJ06 578 aa4.83□□□□□ -1.64
UBE2D3-225ENST00000508476 J3KR12 359 aa4.83□□□□□ -1.64
UBE2D3-225ENST00000508476 CHL1O00533 1208 aa4.83□□□□□ -1.64
UBE2D3-225ENST00000508476 SERPINI2O75830 405 aa4.83□□□□□ -1.64
UBE2D3-225ENST00000508476 DDNO94850 711 aaPredicted RBP4.83□□□□□ -1.64
UBE2D3-225ENST00000508476 CTPS1P17812 591 aa4.83□□□□□ -1.64
UBE2D3-225ENST00000508476 GPR12P47775 334 aa4.83□□□□□ -1.64
UBE2D3-225ENST00000508476 ARSFP54793 590 aa4.83□□□□□ -1.64
UBE2D3-225ENST00000508476 CYP4A11Q02928 519 aa4.83□□□□□ -1.64
UBE2D3-225ENST00000508476 HYAL1Q12794 435 aa4.83□□□□□ -1.64
UBE2D3-225ENST00000508476 FAM76BQ5HYJ3 339 aa4.83□□□□□ -1.64
UBE2D3-225ENST00000508476 RETSATQ6NUM9 610 aa4.83□□□□□ -1.64
UBE2D3-225ENST00000508476 CUZD1Q86UP6 607 aa4.83□□□□□ -1.64
UBE2D3-225ENST00000508476 GHDCQ8N2G8 530 aa4.83□□□□□ -1.64
UBE2D3-225ENST00000508476 TMEM57Q8N5G2 664 aa4.83□□□□□ -1.64
UBE2D3-225ENST00000508476 ENAHQ8N8S7 591 aaPredicted RBP4.83□□□□□ -1.64
UBE2D3-225ENST00000508476 CEP70Q8NHQ1 597 aa4.83□□□□□ -1.64
UBE2D3-225ENST00000508476 DNASE2BQ8WZ79 361 aa4.83□□□□□ -1.64
UBE2D3-225ENST00000508476 NPLQ9BXD5 320 aaPredicted RBP4.83□□□□□ -1.64
UBE2D3-225ENST00000508476 TMEM51Q9NW97 253 aa4.83□□□□□ -1.64
UBE2D3-225ENST00000508476 CLDN16Q9Y5I7 305 aa4.83□□□□□ -1.64
UBE2D3-225ENST00000508476 TCF20Q9UGU0 1960 aaKnown RBP4.82□□□□□ -1.64
UBE2D3-225ENST00000508476 PLSCR5A0PG75 271 aa4.82□□□□□ -1.64
UBE2D3-225ENST00000508476 SERPINC1P01008 464 aa4.82□□□□□ -1.64
UBE2D3-225ENST00000508476 TUBA1BP68363 451 aa4.82□□□□□ -1.64
UBE2D3-225ENST00000508476 FAM27E3Q08E93 113 aa4.82□□□□□ -1.64
UBE2D3-225ENST00000508476 TRAF2Q12933 501 aa4.82□□□□□ -1.64
UBE2D3-225ENST00000508476 LPIN1Q14693 890 aa4.82□□□□□ -1.64
UBE2D3-225ENST00000508476 KRT72Q14CN4 511 aa4.82□□□□□ -1.64
UBE2D3-225ENST00000508476 SLC18A3Q16572 532 aa4.82□□□□□ -1.64
UBE2D3-225ENST00000508476 TYW3Q6IPR3 259 aaKnown RBP4.82□□□□□ -1.64
UBE2D3-225ENST00000508476 SPSB3Q6PJ21 355 aa4.82□□□□□ -1.64
UBE2D3-225ENST00000508476 PATL1Q86TB9 770 aaKnown RBP4.82□□□□□ -1.64
UBE2D3-225ENST00000508476 MON1AQ86VX9 555 aa4.82□□□□□ -1.64
UBE2D3-225ENST00000508476 FTSJ3Q8IY81 847 aaKnown RBP4.82□□□□□ -1.64
UBE2D3-225ENST00000508476 ANKRD44Q8N8A2 993 aa4.82□□□□□ -1.64
UBE2D3-225ENST00000508476 WFIKKN2Q8TEU8 576 aa4.82□□□□□ -1.64
UBE2D3-225ENST00000508476 YME1L1Q96TA2 773 aa4.82□□□□□ -1.64
UBE2D3-225ENST00000508476 CLSTN3Q9BQT9 956 aa4.82□□□□□ -1.64
UBE2D3-225ENST00000508476 TTC12Q9H892 705 aaPredicted RBP4.82□□□□□ -1.64
UBE2D3-225ENST00000508476 A0A1B0GVM2 712 aa4.81□□□□□ -1.64
UBE2D3-225ENST00000508476 ZNF432O94892 652 aa4.81□□□□□ -1.64
UBE2D3-225ENST00000508476 ADORA2A-AS1P86434 159 aa4.81□□□□□ -1.64
UBE2D3-225ENST00000508476 GOLGA8FQ08AF8 430 aa4.81□□□□□ -1.64
UBE2D3-225ENST00000508476 CTXN3Q4LDR2 81 aa4.81□□□□□ -1.64
UBE2D3-225ENST00000508476 ZNF628Q5EBL2 1059 aa4.81□□□□□ -1.64
UBE2D3-225ENST00000508476 ANO1Q5XXA6 986 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms