RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 ZNF385DQ9H6B1 395 aa17.18■□□□□ 0.34
LIN54-204ENST00000505397 CNGB3Q9NQW8 809 aa17.18■□□□□ 0.34
LIN54-204ENST00000505397 C20orf96Q9NUD7 363 aaPredicted RBP17.18■□□□□ 0.34
LIN54-204ENST00000505397 SLC22A2O15244 555 aa17.18■□□□□ 0.34
LIN54-204ENST00000505397 ATP9BO43861 1147 aa17.18■□□□□ 0.34
LIN54-204ENST00000505397 CD1EP15812 388 aa17.18■□□□□ 0.34
LIN54-204ENST00000505397 PRKAA2P54646 552 aa17.18■□□□□ 0.34
LIN54-204ENST00000505397 AQP4P55087 323 aa17.18■□□□□ 0.34
LIN54-204ENST00000505397 MAPRE1Q15691 268 aaKnown RBP17.18■□□□□ 0.34
LIN54-204ENST00000505397 CLLU1OSQ5K130 101 aa17.18■□□□□ 0.34
LIN54-204ENST00000505397 LCA5Q86VQ0 697 aa17.18■□□□□ 0.34
LIN54-204ENST00000505397 EFCAB3Q8N7B9 438 aa17.18■□□□□ 0.34
LIN54-204ENST00000505397 ZNF784Q8NCA9 323 aaPredicted RBP17.18■□□□□ 0.34
LIN54-204ENST00000505397 ADAM32Q8TC27 787 aa17.18■□□□□ 0.34
LIN54-204ENST00000505397 RTP3Q9BQQ7 232 aa17.18■□□□□ 0.34
LIN54-204ENST00000505397 ACE2Q9BYF1 805 aaPredicted RBP17.18■□□□□ 0.34
LIN54-204ENST00000505397 IARS2Q9NSE4 1012 aaKnown RBP17.18■□□□□ 0.34
LIN54-204ENST00000505397 STK39Q9UEW8 545 aa17.18■□□□□ 0.34
LIN54-204ENST00000505397 PRPF19Q9UMS4 504 aaKnown RBP17.18■□□□□ 0.34
LIN54-204ENST00000505397 HDAC3O15379 428 aa17.17■□□□□ 0.34
LIN54-204ENST00000505397 CACNG3O60359 315 aa17.17■□□□□ 0.34
LIN54-204ENST00000505397 ITGB1P05556 798 aa17.17■□□□□ 0.34
LIN54-204ENST00000505397 CHRNGP07510 517 aa17.17■□□□□ 0.34
LIN54-204ENST00000505397 THRAP10827 490 aa17.17■□□□□ 0.34
LIN54-204ENST00000505397 GRM3Q14832 879 aa17.17■□□□□ 0.34
LIN54-204ENST00000505397 ANO4Q32M45 955 aa17.17■□□□□ 0.34
LIN54-204ENST00000505397 LIPMQ5VYY2 423 aa17.17■□□□□ 0.34
LIN54-204ENST00000505397 ABI1Q8IZP0 508 aa17.17■□□□□ 0.34
LIN54-204ENST00000505397 KIFC1Q9BW19 673 aa17.17■□□□□ 0.34
LIN54-204ENST00000505397 VPS28Q9UK41 221 aa17.17■□□□□ 0.34
LIN54-204ENST00000505397 COL4A4P53420 1690 aaPredicted RBP17.17■□□□□ 0.34
LIN54-204ENST00000505397 RGSL1A5PLK6 1076 aa17.17■□□□□ 0.34
LIN54-204ENST00000505397 TARM1B6A8C7 271 aa17.17■□□□□ 0.34
LIN54-204ENST00000505397 VCLP18206 1134 aa17.17■□□□□ 0.34
LIN54-204ENST00000505397 TYMPP19971 482 aa17.17■□□□□ 0.34
LIN54-204ENST00000505397 MPSTP25325 297 aa17.17■□□□□ 0.34
LIN54-204ENST00000505397 DNAJB1P25685 340 aa17.17■□□□□ 0.34
LIN54-204ENST00000505397 PIK3R1P27986 724 aa17.17■□□□□ 0.34
LIN54-204ENST00000505397 NMBRP28336 390 aa17.17■□□□□ 0.34
LIN54-204ENST00000505397 RPL14P50914 215 aaKnown RBP17.17■□□□□ 0.34
LIN54-204ENST00000505397 ZNF135P52742 658 aaPredicted RBP17.17■□□□□ 0.34
LIN54-204ENST00000505397 SATB1Q01826 763 aa17.17■□□□□ 0.34
LIN54-204ENST00000505397 YWHAHQ04917 246 aaPredicted RBP17.17■□□□□ 0.34
LIN54-204ENST00000505397 MED21Q13503 144 aa17.17■□□□□ 0.34
LIN54-204ENST00000505397 LRRC36Q1X8D7 754 aa17.17■□□□□ 0.34
LIN54-204ENST00000505397 OGFRL1Q5TC84 451 aaPredicted RBP17.17■□□□□ 0.34
LIN54-204ENST00000505397 CD300LGQ6UXG3 332 aa17.17■□□□□ 0.34
LIN54-204ENST00000505397 EP400NLQ6ZTU2 488 aa17.17■□□□□ 0.34
LIN54-204ENST00000505397 ZC3HC1Q86WB0 502 aaKnown RBP17.17■□□□□ 0.34
LIN54-204ENST00000505397 FAM126BQ8IXS8 530 aa17.17■□□□□ 0.34
LIN54-204ENST00000505397 NSMCE4AQ9NXX6 385 aa17.17■□□□□ 0.34
LIN54-204ENST00000505397 CPSF2Q9P2I0 782 aaKnown RBP17.17■□□□□ 0.34
LIN54-204ENST00000505397 FNDC1Q4ZHG4 1894 aaPredicted RBP17.17■□□□□ 0.34
LIN54-204ENST00000505397 AP3B1O00203 1094 aa17.16■□□□□ 0.34
LIN54-204ENST00000505397 GRID2O43424 1007 aa17.16■□□□□ 0.34
LIN54-204ENST00000505397 DNAJB2P25686 324 aa17.16■□□□□ 0.34
LIN54-204ENST00000505397 OR1G1P47890 313 aa17.16■□□□□ 0.34
LIN54-204ENST00000505397 FAM189BP81408 668 aa17.16■□□□□ 0.34
LIN54-204ENST00000505397 LSM12Q3MHD2 195 aaKnown RBP17.16■□□□□ 0.34
LIN54-204ENST00000505397 FAM171BQ6P995 826 aa17.16■□□□□ 0.34
LIN54-204ENST00000505397 ARHGAP18Q8N392 663 aa17.16■□□□□ 0.34
LIN54-204ENST00000505397 ZMIZ2Q8NF64 920 aa17.16■□□□□ 0.34
LIN54-204ENST00000505397 RP9Q8TA86 221 aaKnown RBP17.16■□□□□ 0.34
LIN54-204ENST00000505397 BTBD9Q96Q07 612 aa17.16■□□□□ 0.34
LIN54-204ENST00000505397 RHOJQ9H4E5 214 aa17.16■□□□□ 0.34
LIN54-204ENST00000505397 TMEM161AQ9NX61 479 aa17.16■□□□□ 0.34
LIN54-204ENST00000505397 BDNFP23560 247 aa17.16■□□□□ 0.34
LIN54-204ENST00000505397 CALRP27797 417 aaKnown RBP17.16■□□□□ 0.34
LIN54-204ENST00000505397 ADSLP30566 484 aaPredicted RBP17.16■□□□□ 0.34
LIN54-204ENST00000505397 RABGGTBP53611 331 aa17.16■□□□□ 0.34
LIN54-204ENST00000505397 CDH17Q12864 832 aa17.16■□□□□ 0.34
LIN54-204ENST00000505397 BHLHA9Q7RTU4 235 aa17.16■□□□□ 0.34
LIN54-204ENST00000505397 GPRIN1Q7Z2K8 1008 aa17.16■□□□□ 0.34
LIN54-204ENST00000505397 ZNF280BQ86YH2 543 aa17.16■□□□□ 0.34
LIN54-204ENST00000505397 NCSTNQ92542 709 aa17.16■□□□□ 0.34
LIN54-204ENST00000505397 DEFB118Q96PH6 123 aa17.16■□□□□ 0.34
LIN54-204ENST00000505397 BEGAINQ9BUH8 593 aa17.16■□□□□ 0.34
LIN54-204ENST00000505397 COLEC11Q9BWP8 271 aa17.16■□□□□ 0.34
LIN54-204ENST00000505397 WDR55Q9H6Y2 383 aaPredicted RBP17.16■□□□□ 0.34
LIN54-204ENST00000505397 DMAP1Q9NPF5 467 aaPredicted RBP17.16■□□□□ 0.34
LIN54-204ENST00000505397 TBC1D13Q9NVG8 400 aa17.16■□□□□ 0.34
LIN54-204ENST00000505397 SLC39A10Q9ULF5 831 aa17.16■□□□□ 0.34
LIN54-204ENST00000505397 PCDHB8Q9UN66 801 aa17.16■□□□□ 0.34
LIN54-204ENST00000505397 F8W810 466 aa17.15■□□□□ 0.34
LIN54-204ENST00000505397 TK2O00142 265 aa17.15■□□□□ 0.34
LIN54-204ENST00000505397 DDHD2O94830 711 aa17.15■□□□□ 0.34
LIN54-204ENST00000505397 TPH1P17752 444 aa17.15■□□□□ 0.34
LIN54-204ENST00000505397 SERPINB6P35237 376 aa17.15■□□□□ 0.34
LIN54-204ENST00000505397 GRIA4P48058 902 aa17.15■□□□□ 0.34
LIN54-204ENST00000505397 DSC1Q08554 894 aa17.15■□□□□ 0.34
LIN54-204ENST00000505397 NSUN2Q08J23 767 aaKnown RBP eCLIP17.15■□□□□ 0.34
LIN54-204ENST00000505397 DLG1Q12959 904 aa17.15■□□□□ 0.34
LIN54-204ENST00000505397 ARL13BQ3SXY8 428 aa17.15■□□□□ 0.34
LIN54-204ENST00000505397 LIN52Q52LA3 116 aa17.15■□□□□ 0.34
LIN54-204ENST00000505397 SEL1L3Q68CR1 1132 aa17.15■□□□□ 0.34
LIN54-204ENST00000505397 OR10T2Q8NGX3 314 aa17.15■□□□□ 0.34
LIN54-204ENST00000505397 STYXQ8WUJ0 223 aa17.15■□□□□ 0.34
LIN54-204ENST00000505397 APOL2Q9BQE5 337 aa17.15■□□□□ 0.34
LIN54-204ENST00000505397 RHOBTB2Q9BYZ6 727 aa17.15■□□□□ 0.34
LIN54-204ENST00000505397 RRN3Q9NYV6 651 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms