RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 TMEM145Q8NBT3 493 aa9.28□□□□□ -0.92
DHFR-202ENST00000504396 GRIN3AQ8TCU5 1115 aa9.28□□□□□ -0.92
DHFR-202ENST00000504396 HIC2Q96JB3 615 aa9.28□□□□□ -0.92
DHFR-202ENST00000504396 DUSP23Q9BVJ7 150 aa9.28□□□□□ -0.92
DHFR-202ENST00000504396 DPH1Q9BZG8 443 aa9.28□□□□□ -0.92
DHFR-202ENST00000504396 CAAP1Q9H8G2 361 aa9.28□□□□□ -0.92
DHFR-202ENST00000504396 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.28□□□□□ -0.921e-6■■□□□ 14
DHFR-202ENST00000504396 DDIT4Q9NX09 232 aa9.28□□□□□ -0.92
DHFR-202ENST00000504396 NLGN3Q9NZ94 848 aa9.28□□□□□ -0.92
DHFR-202ENST00000504396 IPO11Q9UI26 975 aaKnown RBP9.28□□□□□ -0.92
DHFR-202ENST00000504396 VANGL2Q9ULK5 521 aa9.28□□□□□ -0.92
DHFR-202ENST00000504396 PPM1HQ9ULR3 514 aa9.28□□□□□ -0.92
DHFR-202ENST00000504396 DOCK9Q9BZ29 2069 aa9.27□□□□□ -0.92
DHFR-202ENST00000504396 KALRNO60229 2985 aa9.27□□□□□ -0.93
DHFR-202ENST00000504396 A6NNZ2 444 aa9.27□□□□□ -0.93
DHFR-202ENST00000504396 MCF2LO15068 1137 aa9.27□□□□□ -0.93
DHFR-202ENST00000504396 MED7O43513 233 aa9.27□□□□□ -0.93
DHFR-202ENST00000504396 GP1BAP07359 652 aa9.27□□□□□ -0.93
DHFR-202ENST00000504396 CCR1P32246 355 aa9.27□□□□□ -0.93
DHFR-202ENST00000504396 PPP1R2P41236 205 aa9.27□□□□□ -0.93
DHFR-202ENST00000504396 RECQLP46063 649 aaPredicted RBP9.27□□□□□ -0.93
DHFR-202ENST00000504396 MAP2K3P46734 347 aa9.27□□□□□ -0.93
DHFR-202ENST00000504396 HNRNPKP61978 463 aaKnown RBP eCLIP9.27□□□□□ -0.93
DHFR-202ENST00000504396 YWHAZP63104 245 aaKnown RBP9.27□□□□□ -0.93
DHFR-202ENST00000504396 PITX1P78337 314 aaPredicted RBP9.27□□□□□ -0.93
DHFR-202ENST00000504396 CDK17Q00537 523 aa9.27□□□□□ -0.93
DHFR-202ENST00000504396 NME3Q13232 169 aa9.27□□□□□ -0.93
DHFR-202ENST00000504396 CRTC2Q53ET0 693 aaPredicted RBP9.27□□□□□ -0.93
DHFR-202ENST00000504396 PIP5KL1Q5T9C9 394 aa9.27□□□□□ -0.93
DHFR-202ENST00000504396 ANKRD40Q6AI12 368 aa9.27□□□□□ -0.93
DHFR-202ENST00000504396 DENND1BQ6P3S1 775 aa9.27□□□□□ -0.93
DHFR-202ENST00000504396 Q6ZSR6 202 aa9.27□□□□□ -0.93
DHFR-202ENST00000504396 HORMAD1Q86X24 394 aa9.27□□□□□ -0.93
DHFR-202ENST00000504396 SH2D3CQ8N5H7 860 aa9.27□□□□□ -0.93
DHFR-202ENST00000504396 ARRDC3Q96B67 414 aa9.27□□□□□ -0.93
DHFR-202ENST00000504396 IFT43Q96FT9 208 aa9.27□□□□□ -0.93
DHFR-202ENST00000504396 ATXN7L3BQ96GX2 97 aa9.27□□□□□ -0.93
DHFR-202ENST00000504396 NOX5Q96PH1 765 aa9.27□□□□□ -0.93
DHFR-202ENST00000504396 MED15Q96RN5 788 aa9.27□□□□□ -0.93
DHFR-202ENST00000504396 GOLPH3LQ9H4A5 285 aa9.27□□□□□ -0.93
DHFR-202ENST00000504396 USP29Q9HBJ7 922 aa9.27□□□□□ -0.93
DHFR-202ENST00000504396 PCDHGC4Q9Y5F7 938 aa9.27□□□□□ -0.93
DHFR-202ENST00000504396 HEMK1Q9Y5R4 338 aaPredicted RBP9.27□□□□□ -0.93
DHFR-202ENST00000504396 FLNBO75369 2602 aaKnown RBP9.27□□□□□ -0.93
DHFR-202ENST00000504396 SERTM1A2A2V5 107 aa9.26□□□□□ -0.93
DHFR-202ENST00000504396 K7ESM1 405 aa9.26□□□□□ -0.93
DHFR-202ENST00000504396 ARHGAP6O43182 974 aa9.26□□□□□ -0.93
DHFR-202ENST00000504396 THAP12O43422 761 aa9.26□□□□□ -0.93
DHFR-202ENST00000504396 GRAP2O75791 330 aa9.26□□□□□ -0.93
DHFR-202ENST00000504396 ENDOD1O94919 500 aa9.26□□□□□ -0.93
DHFR-202ENST00000504396 LETM1O95202 739 aaPredicted RBP9.26□□□□□ -0.93
DHFR-202ENST00000504396 IGLV3-25P01717 112 aa9.26□□□□□ -0.93
DHFR-202ENST00000504396 CTSLP07711 333 aa9.26□□□□□ -0.93
DHFR-202ENST00000504396 RHOCP08134 193 aa9.26□□□□□ -0.93
DHFR-202ENST00000504396 TGM2P21980 687 aa9.26□□□□□ -0.93
DHFR-202ENST00000504396 CHRNA3P32297 505 aa9.26□□□□□ -0.93
DHFR-202ENST00000504396 GPD2P43304 727 aa9.26□□□□□ -0.93
DHFR-202ENST00000504396 IRAK1P51617 712 aa9.26□□□□□ -0.93
DHFR-202ENST00000504396 PMS1P54277 932 aaKnown RBP9.26□□□□□ -0.93
DHFR-202ENST00000504396 TAS2R38P59533 333 aa9.26□□□□□ -0.93
DHFR-202ENST00000504396 KRT83P78385 493 aa9.26□□□□□ -0.93
DHFR-202ENST00000504396 CTBSQ01459 385 aa9.26□□□□□ -0.93
DHFR-202ENST00000504396 STIM1Q13586 685 aa9.26□□□□□ -0.93
DHFR-202ENST00000504396 ISXQ2M1V0 245 aa9.26□□□□□ -0.93
DHFR-202ENST00000504396 ZNF284Q2VY69 593 aa9.26□□□□□ -0.93
DHFR-202ENST00000504396 DEFB133Q30KQ1 61 aa9.26□□□□□ -0.93
DHFR-202ENST00000504396 SEL1L3Q68CR1 1132 aa9.26□□□□□ -0.93
DHFR-202ENST00000504396 ZCCHC8Q6NZY4 707 aaKnown RBP9.26□□□□□ -0.93
DHFR-202ENST00000504396 FBXL22Q6P050 247 aa9.26□□□□□ -0.93
DHFR-202ENST00000504396 FOXR2Q6PJQ5 311 aa9.26□□□□□ -0.93
DHFR-202ENST00000504396 CCDC81Q6ZN84 652 aa9.26□□□□□ -0.93
DHFR-202ENST00000504396 GCNT7Q6ZNI0 430 aa9.26□□□□□ -0.93
DHFR-202ENST00000504396 EFL1Q7Z2Z2 1120 aaKnown RBP9.26□□□□□ -0.93
DHFR-202ENST00000504396 ARHGEF19Q8IW93 802 aa9.26□□□□□ -0.93
DHFR-202ENST00000504396 SLC22A18ASQ8N1D0 253 aa9.26□□□□□ -0.93
DHFR-202ENST00000504396 ZNF548Q8NEK5 533 aaPredicted RBP9.26□□□□□ -0.93
DHFR-202ENST00000504396 CCDC97Q96F63 343 aaPredicted RBP9.26□□□□□ -0.93
DHFR-202ENST00000504396 MED8Q96G25 268 aa9.26□□□□□ -0.93
DHFR-202ENST00000504396 PPP1R16AQ96I34 528 aa9.26□□□□□ -0.93
DHFR-202ENST00000504396 CEP63Q96MT8 703 aa9.26□□□□□ -0.93
DHFR-202ENST00000504396 PRMT1Q99873 361 aaKnown RBP9.26□□□□□ -0.93
DHFR-202ENST00000504396 FEM1AQ9BSK4 669 aa9.26□□□□□ -0.93
DHFR-202ENST00000504396 SRRTQ9BXP5 876 aaKnown RBP9.26□□□□□ -0.93
DHFR-202ENST00000504396 SIK2Q9H0K1 926 aa9.26□□□□□ -0.93
DHFR-202ENST00000504396 ASCL3Q9NQ33 180 aa9.26□□□□□ -0.93
DHFR-202ENST00000504396 CNTN6Q9UQ52 1028 aa9.26□□□□□ -0.93
DHFR-202ENST00000504396 COL6A6A6NMZ7 2263 aa9.26□□□□□ -0.93
DHFR-202ENST00000504396 K7ERQ8 282 aa9.25□□□□□ -0.93
DHFR-202ENST00000504396 PSMA7O14818 248 aa9.25□□□□□ -0.93
DHFR-202ENST00000504396 SCAMP1O15126 338 aa9.25□□□□□ -0.93
DHFR-202ENST00000504396 SNAP91O60641 907 aa9.25□□□□□ -0.93
DHFR-202ENST00000504396 SMC2O95347 1197 aa9.25□□□□□ -0.93
DHFR-202ENST00000504396 ADCY5O95622 1261 aa9.25□□□□□ -0.93
DHFR-202ENST00000504396 PRNPP04156 253 aa9.25□□□□□ -0.93
DHFR-202ENST00000504396 GLI1P08151 1106 aa9.25□□□□□ -0.93
DHFR-202ENST00000504396 BMP4P12644 408 aa9.25□□□□□ -0.93
DHFR-202ENST00000504396 SRCP12931 536 aa9.25□□□□□ -0.93
DHFR-202ENST00000504396 RRM1P23921 792 aa9.25□□□□□ -0.93
DHFR-202ENST00000504396 USP8P40818 1118 aa9.25□□□□□ -0.93
DHFR-202ENST00000504396 DNA2P51530 1060 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms