RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 ZNF10P21506 573 aaPredicted RBP16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 CRYBB1P53674 252 aaPredicted RBP16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 GNA13Q14344 377 aa16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 ARMC4Q5T2S8 1044 aa16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 ZNF605Q86T29 641 aa16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 PYDC1Q8WXC3 89 aa16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 FAM192AQ9GZU8 254 aa16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 PRKAG3Q9UGI9 489 aa16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 FYNP06241 537 aa16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 MRPS5P82675 430 aaKnown RBP16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 INTS11Q5TA45 600 aaKnown RBP16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 CXCL17Q6UXB2 119 aa16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 LRP10Q7Z4F1 713 aa16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 VN1R5Q7Z5H4 357 aa16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 METTL3Q86U44 580 aaKnown RBP16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 TOP6BLQ8N6T0 577 aa16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 PURBQ96QR8 312 aaKnown RBP16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 RNF19AQ9NV58 838 aa16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 VAV3Q9UKW4 847 aa16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 NCKAP1Q9Y2A7 1128 aa16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 DERAQ9Y315 318 aa16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 RAP2CQ9Y3L5 183 aa16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 ITGA2BP08514 1039 aa16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 MYL12AP19105 171 aa16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 SKP1P63208 163 aa16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 SHROOM1Q2M3G4 852 aaPredicted RBP16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 C4orf32Q8N8J7 132 aa16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 MPP4Q96JB8 637 aa16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 MRPS26Q9BYN8 205 aaKnown RBP16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 SENP6Q9GZR1 1112 aaPredicted RBP16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 SEMA6AQ9H2E6 1030 aa16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 MYBL2P10244 700 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 TFEBP19484 476 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 PBX1P40424 430 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 TAS2R40P59535 323 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 LYPLAL1Q5VWZ2 237 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 CYP20A1Q6UW02 462 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 RD3Q7Z3Z2 195 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 TNFRSF25Q93038 417 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 LHX5Q9H2C1 402 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 SERHL2Q9H4I8 314 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 SERHLQ9NQF3 203 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 LEF1Q9UJU2 399 aaPredicted RBP16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 WBP4O75554 376 aaKnown RBP16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 GTF2E2P29084 291 aaKnown RBP16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 FUT2Q10981 343 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 ARSHQ5FYA8 562 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 TPGS1Q6ZTW0 290 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 TRAPPC5Q8IUR0 188 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 MAGEB10Q96LZ2 347 aaPredicted RBP16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 PPP3R2Q96LZ3 170 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 TBCDQ9BTW9 1192 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 FTHL17Q9BXU8 183 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 CNGB3Q9NQW8 809 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 ENTPD4Q9Y227 616 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 RGSL1A5PLK6 1076 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 ANKDD1BA6NHY2 528 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 SGTAO43765 313 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 FEN1P39748 380 aaKnown RBP16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 GABRB2P47870 512 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 UGCGQ16739 394 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 DGUOKQ16854 277 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 NOMO2Q5JPE7 1267 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 SUSD6Q92537 303 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 GIT1Q9Y2X7 761 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 HDAC3O15379 428 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 CSH1P0DML2 217 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 CSH2P0DML3 217 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 ERCC2P18074 760 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 CREMQ03060 361 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 PPIDQ08752 370 aaKnown RBP16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 ECM1Q16610 540 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 RP9Q8TA86 221 aaKnown RBP16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 ACE2Q9BYF1 805 aaPredicted RBP16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 TRAV19A0A0A6YYK7 116 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 PNMA8CA0A1B0GUJ8 204 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 A8MX80 341 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 ITGA1P56199 1179 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 INO80DQ53TQ3 878 aaPredicted RBP16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 KRT73Q86Y46 540 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 ATP13A3Q9H7F0 1226 aa16.69■□□□□ 0.26
PCDHA1-203ENST00000504120 DRD4P21917 467 aa16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 RSBN1Q5VWQ0 802 aaPredicted RBP16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 DOK6Q6PKX4 331 aa16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 C8orf59Q8N0T1 100 aaPredicted RBP16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 ZNF558Q96NG5 402 aa16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 SEMA3CQ99985 751 aa16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 DUSP16Q9BY84 665 aa16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 EPB41L4BQ9H329 900 aa16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 SPAG4Q9NPE6 437 aa16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 C1orf232A0A0U1RR37 186 aa16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 CENPXA8MT69 81 aa16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 MYL12BO14950 172 aa16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 CES1P23141 567 aa16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 CXCR2P25025 360 aa16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 CLK2P49760 499 aaKnown RBP16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 SLC25A3Q00325 362 aa16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 TOP3AQ13472 1001 aaPredicted RBP16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 DGKKQ5KSL6 1271 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms