RNA–Protein interactions for RNA: ENST00000502705.5

PTPN20-213, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-213ENST00000502705 CD300LGQ6UXG3 332 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 RAD9BQ6WBX8 426 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 TRMT11Q7Z4G4 463 aaKnown RBP4.89□□□□□ -1.63
PTPN20-213ENST00000502705 GPR149Q86SP6 731 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 SLCO6A1Q86UG4 719 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 HOOK3Q86VS8 718 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 TMEM139Q8IV31 216 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 KATNAL2Q8IYT4 538 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 DEFB106AQ8N104 65 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 NDUFAF2Q8N183 169 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 HJURPQ8NCD3 748 aaPredicted RBP4.89□□□□□ -1.63
PTPN20-213ENST00000502705 CSGALNACT1Q8TDX6 532 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 WFIKKN2Q8TEU8 576 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 GDPD5Q8WTR4 605 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 FAM172AQ8WUF8 416 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 SLC22A17Q8WUG5 538 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 RXFP2Q8WXD0 754 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 CASKIN2Q8WXE0 1202 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 RABGGTAQ92696 567 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 TBC1D31Q96DN5 1066 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 SHDQ96IW2 340 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 TWNKQ96RR1 684 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 SRPK1Q96SB4 655 aaKnown RBP4.89□□□□□ -1.63
PTPN20-213ENST00000502705 VAT1Q99536 393 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 SPATA25Q9BR10 227 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 SYT11Q9BT88 431 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 KRTAP9-8Q9BYQ0 159 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 OSBPL2Q9H1P3 480 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 TRPC7Q9HCX4 862 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 TNFRSF12AQ9NP84 129 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 TDP1Q9NUW8 608 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.89□□□□□ -1.63
PTPN20-213ENST00000502705 SMPD4Q9NXE4 827 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 CLDND1Q9NY35 253 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 IGSF9Q9P2J2 1179 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 PPARGC1AQ9UBK2 798 aaKnown RBP4.89□□□□□ -1.63
PTPN20-213ENST00000502705 HMGXB4Q9UGU5 601 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 AMACRQ9UHK6 382 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 CDH7Q9ULB5 785 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 ARHGAP26Q9UNA1 814 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 PCDHGB7Q9Y5F8 929 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 PCDHA3Q9Y5H8 950 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 PMF1-BGLAPU3KQ54 211 aa4.89□□□□□ -1.63
PTPN20-213ENST00000502705 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.88□□□□□ -1.63
PTPN20-213ENST00000502705 A0A1B0GVM2 712 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 A0A1W2PQH9 124 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 LRRD1A4D1F6 860 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 LCHNA4D1U4 455 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 CTAGE15A4D2H0 777 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 ZNF840PA6NDX5 716 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 ARHGAP42A6NI28 874 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 C2CD4BA6NLJ0 364 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 KCNU1A8MYU2 1149 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 EEF2KO00418 725 aaKnown RBP4.88□□□□□ -1.63
PTPN20-213ENST00000502705 APOL1O14791 398 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 MCF2LO15068 1137 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 CCL16O15467 120 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 PSMD3O43242 534 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 PAPSS1O43252 624 aaPredicted RBP4.88□□□□□ -1.63
PTPN20-213ENST00000502705 ECI2O75521 394 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 PALMO75781 387 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 ENDOD1O94919 500 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 ATP5BP06576 529 aaKnown RBP4.88□□□□□ -1.63
PTPN20-213ENST00000502705 ZDHHC11BP0C7U3 371 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 MSL3P1P0C860 447 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 CTAGE8P0CG41 777 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 PNMA6AP0CW24 399 aaPredicted RBP4.88□□□□□ -1.63
PTPN20-213ENST00000502705 CHRNB2P17787 502 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 RPL17P18621 184 aaKnown RBP4.88□□□□□ -1.63
PTPN20-213ENST00000502705 IGFBP6P24592 240 aaPredicted RBP4.88□□□□□ -1.63
PTPN20-213ENST00000502705 DNAJA1P31689 397 aaKnown RBP4.88□□□□□ -1.63
PTPN20-213ENST00000502705 STIP1P31948 543 aaKnown RBP4.88□□□□□ -1.63
PTPN20-213ENST00000502705 L1CAMP32004 1257 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 GBP2P32456 591 aaPredicted RBP4.88□□□□□ -1.63
PTPN20-213ENST00000502705 HSPA9P38646 679 aaKnown RBP4.88□□□□□ -1.63
PTPN20-213ENST00000502705 EIF2DP41214 584 aaKnown RBP4.88□□□□□ -1.63
PTPN20-213ENST00000502705 CXCR3P49682 368 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 RENBPP51606 427 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 MLLT6P55198 1093 aaPredicted RBP4.88□□□□□ -1.63
PTPN20-213ENST00000502705 CDH4P55283 916 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 YBEYP58557 167 aaPredicted RBP4.88□□□□□ -1.63
PTPN20-213ENST00000502705 ST8SIA6P61647 398 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 GAD2Q05329 585 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 RAD51Q06609 339 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 SLC20A2Q08357 652 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 ZNF177Q13360 481 aaPredicted RBP4.88□□□□□ -1.63
PTPN20-213ENST00000502705 ADAM15Q13444 863 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 CDH18Q13634 790 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 PRPSAP1Q14558 356 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 RFTN1Q14699 578 aaPredicted RBP4.88□□□□□ -1.63
PTPN20-213ENST00000502705 PDK1Q15118 436 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 PARP15Q460N3 678 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 MAP9Q49MG5 647 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 GLE1Q53GS7 698 aaKnown RBP4.88□□□□□ -1.63
PTPN20-213ENST00000502705 TCEAL5Q5H9L2 206 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 RARS2Q5T160 578 aaKnown RBP4.88□□□□□ -1.63
PTPN20-213ENST00000502705 ARMC3Q5W041 872 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 HLA-DQA1Q5Y7H0 255 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 SDE2Q6IQ49 451 aa4.88□□□□□ -1.63
PTPN20-213ENST00000502705 RETSATQ6NUM9 610 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms