RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 TCN1P20061 433 aaPredicted RBP5.87□□□□□ -1.47
SOX2-OT-218ENST00000498731 TGM1P22735 817 aa5.87□□□□□ -1.47
SOX2-OT-218ENST00000498731 ARRB2P32121 409 aa5.87□□□□□ -1.47
SOX2-OT-218ENST00000498731 CREB5Q02930 508 aa5.87□□□□□ -1.47
SOX2-OT-218ENST00000498731 SLC10A2Q12908 348 aaPredicted RBP5.87□□□□□ -1.47
SOX2-OT-218ENST00000498731 TUBB3Q13509 450 aa5.87□□□□□ -1.47
SOX2-OT-218ENST00000498731 PPP2R5DQ14738 602 aa5.87□□□□□ -1.47
SOX2-OT-218ENST00000498731 EMC2Q15006 297 aa5.87□□□□□ -1.47
SOX2-OT-218ENST00000498731 SPDYAQ5MJ70 313 aa5.87□□□□□ -1.47
SOX2-OT-218ENST00000498731 FAM205BPQ63HN1 556 aa5.87□□□□□ -1.47
SOX2-OT-218ENST00000498731 HID1Q8IV36 788 aa5.87□□□□□ -1.47
SOX2-OT-218ENST00000498731 FAM169BQ8N8A8 192 aa5.87□□□□□ -1.47
SOX2-OT-218ENST00000498731 RNF149Q8NC42 400 aa5.87□□□□□ -1.47
SOX2-OT-218ENST00000498731 OR2T34Q8NGX1 318 aa5.87□□□□□ -1.47
SOX2-OT-218ENST00000498731 PXYLP1Q8TE99 480 aa5.87□□□□□ -1.47
SOX2-OT-218ENST00000498731 USP13Q92995 863 aaPredicted RBP5.87□□□□□ -1.47
SOX2-OT-218ENST00000498731 GPRASP2Q96D09 838 aa5.87□□□□□ -1.47
SOX2-OT-218ENST00000498731 RUNDC3BQ96NL0 473 aa5.87□□□□□ -1.47
SOX2-OT-218ENST00000498731 NECTIN4Q96NY8 510 aa5.87□□□□□ -1.47
SOX2-OT-218ENST00000498731 FAM49AQ9H0Q0 323 aaPredicted RBP5.87□□□□□ -1.47
SOX2-OT-218ENST00000498731 TOR3AQ9H497 397 aa5.87□□□□□ -1.47
SOX2-OT-218ENST00000498731 CRNNQ9UBG3 495 aaPredicted RBP5.87□□□□□ -1.47
SOX2-OT-218ENST00000498731 CPNE7Q9UBL6 633 aa5.87□□□□□ -1.47
SOX2-OT-218ENST00000498731 DNAJB4Q9UDY4 337 aa5.87□□□□□ -1.47
SOX2-OT-218ENST00000498731 FBXO40Q9UH90 709 aa5.87□□□□□ -1.47
SOX2-OT-218ENST00000498731 AKT3Q9Y243 479 aa5.87□□□□□ -1.47
SOX2-OT-218ENST00000498731 PCDHGA10Q9Y5H3 936 aa5.87□□□□□ -1.47
SOX2-OT-218ENST00000498731 MYH9P35579 1960 aaKnown RBP5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 SERTM1A2A2V5 107 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 SOWAHBA6NEL2 793 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 TRIM64A6NGJ6 449 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 TRIM64BA6NI03 449 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 PODXLO00592 558 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 AP3D1O14617 1153 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 SUPT20HL2P0C7V6 817 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 CD58P19256 250 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 UBA1P22314 1058 aaKnown RBP5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 PSMA3P25788 255 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 ETV4P43268 484 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 CLCN3P51790 818 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 CLCNKBP51801 687 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 RAB15P59190 212 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 IRX4P78413 519 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 PPP3CAQ08209 521 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 CACNB2Q08289 660 aaPredicted RBP5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 RAB39AQ14964 217 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 SNRNP35Q16560 246 aaKnown RBP5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 KIZQ2M2Z5 673 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 HSDL1Q3SXM5 330 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 XKR3Q5GH77 459 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 PRAMEF19Q5SWL8 479 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 MAP3K21Q5TCX8 1036 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 LBX2Q6XYB7 198 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 KYAT3Q6YP21 454 aaKnown RBP5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 SCARA5Q6ZMJ2 495 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 BNC2Q6ZN30 1099 aaPredicted RBP5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 C4orf19Q8IY42 314 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 PARP8Q8N3A8 854 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 CHST13Q8NET6 341 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 RFFLQ8WZ73 363 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 TTC25Q96NG3 672 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 PSKH2Q96QS6 385 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 MSTO1Q9BUK6 570 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 APOL6Q9BWW8 343 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 ATP13A3Q9H7F0 1226 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 COQ10BQ9H8M1 238 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 ZNF304Q9HCX3 659 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 KLHL11Q9NVR0 708 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 FKBP14Q9NWM8 211 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 CPA4Q9UI42 421 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 TBX20Q9UMR3 447 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 ARHGAP26Q9UNA1 814 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 CASP8AP2Q9UKL3 1982 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 CLUHO75153 1309 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 CCDC162PA2VCL2 907 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 FOXN3O00409 490 aaPredicted RBP5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 GIPC1O14908 333 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 KCNK2O95069 426 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 ADSSP30520 456 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 FMO4P31512 558 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 NUP107P57740 925 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 TUBA1BP68363 451 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 TFAMQ00059 246 aaKnown RBP5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 BST1Q10588 318 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 NOGQ13253 232 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 ZNF618Q5T7W0 954 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 BROXQ5VW32 411 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 FAM160B1Q5W0V3 765 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 TUBA1AQ71U36 451 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 HACE1Q8IYU2 909 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 MCPH1Q8NEM0 835 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 TRPC4APQ8TEL6 797 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 ZFP90Q8TF47 636 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 SEPT1Q8WYJ6 367 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 TRIM56Q9BRZ2 755 aaKnown RBP5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 KATNAL1Q9BW62 490 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 NPLQ9BXD5 320 aaPredicted RBP5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 SMARCAD1Q9H4L7 1026 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 VPS37BQ9H9H4 285 aa5.86□□□□□ -1.47
SOX2-OT-218ENST00000498731 CXorf21Q9HAI6 301 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms