RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 ACACAQ13085 2346 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 NEMP2A6NFY4 417 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 ZSCAN5CA6NGD5 496 aaPredicted RBP11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 LGALS16A8MUM7 142 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 GOLGA6L22H0YM25 854 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 RNF103O00237 685 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 KRIT1O00522 736 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 TRIM38O00635 465 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 NEMP1O14524 444 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 SNPHO15079 494 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 TSPAN6O43657 245 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 SIGLEC6O43699 453 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 LRIG2O94898 1065 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 GJB6O95452 261 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 GSRP00390 522 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 CCDC172P0C7W6 258 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 RFC1P35251 1148 aaPredicted RBP11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 HDAC4P56524 1084 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 GSCP56915 257 aaPredicted RBP11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 CLDN2P57739 230 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 MYL5Q02045 173 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 UBXN1Q04323 297 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 RAD51Q06609 339 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 TARDBPQ13148 414 aaKnown RBP eCLIP11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 STX1AQ16623 288 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 CLEC16AQ2KHT3 1053 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 PROX2Q3B8N5 592 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 RAB6CQ53S08 254 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 ZNF805Q5CZA5 627 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 GCNT7Q6ZNI0 430 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 RBM43Q6ZSC3 357 aaKnown RBP11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 Q6ZSR6 202 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 ABI3BPQ7Z7G0 1075 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 SLFN11Q7Z7L1 901 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 PDZD3Q86UT5 571 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 NLRP14Q86W24 1093 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 SLC25A45Q8N413 288 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 CCDC185Q8N715 623 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 C3orf20Q8ND61 904 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 OR2AP1Q8NGE2 309 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 OR4C6Q8NH72 309 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 NTAN1Q96AB6 310 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 ARHGEF26Q96DR7 871 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 PCDHB18PQ96TA0 734 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 OSBPL1AQ9BXW6 950 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 RAB6CQ9H0N0 254 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 EVA1BQ9NVM1 165 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 LIMA1Q9UHB6 759 aaKnown RBP11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 IPO11Q9UI26 975 aaKnown RBP11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 AK5Q9Y6K8 562 aa11.96□□□□□ -0.49
NUDCD3-211ENST00000497978 ZFHX4Q86UP3 3567 aa11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 SIGLEC16A6NMB1 481 aa11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 C16orf96A6NNT2 1141 aa11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 FAM72CH0Y354 149 aa11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 H3BM21 787 aa11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 FPGTO14772 594 aa11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 FFAR2O15552 330 aa11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 BUB1O43683 1085 aa11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 KDELR3O43731 214 aa11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 PIAS2O75928 621 aa11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 POP4O95707 220 aaKnown RBP11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 CD160O95971 181 aa11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 PAK4O96013 591 aaPredicted RBP11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 RABIFP47224 123 aa11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 CLDN6P56747 220 aa11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 HNRNPKP61978 463 aaKnown RBP eCLIP11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 PTP4A2Q12974 167 aa11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 MYLK3Q32MK0 819 aa11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 EFHC2Q5JST6 749 aa11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 FAM72AQ5TYM5 149 aa11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 FAM72DQ6L9T8 149 aa11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 DNAJC24Q6P3W2 148 aa11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 SCYL2Q6P3W7 929 aa11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 WDR59Q6PJI9 974 aa11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 KYAT3Q6YP21 454 aaKnown RBP11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 PARS2Q7L3T8 475 aaKnown RBP11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 FAM72BQ86X60 149 aa11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 CACTIN-AS1Q8N1I8 211 aa11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 OR6K2Q8NGY2 324 aa11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 NRSN2Q9GZP1 204 aa11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 NDFIP2Q9NV92 336 aa11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 UCKL1Q9NWZ5 548 aa11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 DNAJC28Q9NX36 388 aa11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 NLGN3Q9NZ94 848 aa11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 CLCA2Q9UQC9 943 aa11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 ACTL7AQ9Y615 435 aa11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 URB1O60287 2271 aaKnown RBP11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 ARID1BQ8NFD5 2236 aaPredicted RBP11.95□□□□□ -0.5
NUDCD3-211ENST00000497978 ASPMQ8IZT6 3477 aa11.94□□□□□ -0.5
NUDCD3-211ENST00000497978 A0A087WV48 116 aa11.94□□□□□ -0.5
NUDCD3-211ENST00000497978 IGLON5A6NGN9 336 aa11.94□□□□□ -0.5
NUDCD3-211ENST00000497978 UGT2B4P06133 528 aa11.94□□□□□ -0.5
NUDCD3-211ENST00000497978 NUDT7P0C024 238 aa11.94□□□□□ -0.5
NUDCD3-211ENST00000497978 EPHB2P29323 1055 aa11.94□□□□□ -0.5
NUDCD3-211ENST00000497978 GKP32189 559 aa11.94□□□□□ -0.5
NUDCD3-211ENST00000497978 DUSP3P51452 185 aaPredicted RBP11.94□□□□□ -0.5
NUDCD3-211ENST00000497978 ZNF143P52747 638 aaPredicted RBP11.94□□□□□ -0.5
NUDCD3-211ENST00000497978 AIF1P55008 147 aa11.94□□□□□ -0.5
NUDCD3-211ENST00000497978 FGL2Q14314 439 aa11.94□□□□□ -0.5
NUDCD3-211ENST00000497978 LEKR1Q6ZMV7 388 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms