RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 PRR36Q9H6K5 1346 aa8.27□□□□□ -1.08
CRNKL1-205ENST00000496549 TCRBV9S1A1TA0A576 114 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 TRDMT1O14717 391 aaKnown RBP8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 MRASO14807 208 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 GSTA4O15217 222 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 GCATO75600 419 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 SORBS2O94875 1100 aaKnown RBP8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 GSTM1P09488 218 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 PTPN1P18031 435 aaKnown RBP8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 CD247P20963 164 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 SAT1P21673 171 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 CRHR1P34998 444 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 VAMP7P51809 220 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 B2MP61769 119 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 FOXO4P98177 505 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 SMARCB1Q12824 385 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 GRSF1Q12849 480 aaKnown RBP eCLIP8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 INAVAQ3KP66 663 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 ZIK1Q3SY52 487 aaPredicted RBP8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 MPP5Q8N3R9 675 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 ZFP90Q8TF47 636 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 SNX19Q92543 992 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 CELF1Q92879 486 aaKnown RBP8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 MTERF3Q96E29 417 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 TNIP3Q96KP6 325 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 COG4Q9H9E3 785 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 NTN4Q9HB63 628 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 WASH6PQ9NQA3 447 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 DYRK4Q9NR20 520 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 TBC1D13Q9NVG8 400 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 DPP3Q9NY33 737 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 TAS2R9Q9NYW1 312 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 MLXQ9UH92 298 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 PEX16Q9Y5Y5 336 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 BAZ2BQ9UIF8 2168 aaKnown RBP8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 PLEKHG3A1L390 1219 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 ZNF99A8MXY4 864 aaPredicted RBP8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 H3BMM5 538 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 K7ENM7 598 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 INPP4BO15327 924 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 SYNCRIPO60506 623 aaKnown RBP8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 SGPL1O95470 568 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 NDST3O95803 873 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 PDGFAP04085 211 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 ALDH4A1P30038 563 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 FMO4P31512 558 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 CD83Q01151 205 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 UBE3AQ05086 875 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 SKIV2LQ15477 1246 aaKnown RBP8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 UGP2Q16851 508 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 IMPG1Q17R60 797 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 NDUFAF5Q5TEU4 345 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 RASAL3Q86YV0 1011 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 TFB1MQ8WVM0 346 aaKnown RBP8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 PNMA5Q96PV4 448 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 GABBR1Q9UBS5 961 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 CNOT6Q9ULM6 557 aaKnown RBP8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 PDE10AQ9Y233 779 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 HSPB11Q9Y547 144 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 XIRP1Q702N8 1843 aaKnown RBP8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 ZNF536O15090 1300 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 A0A0G2JPF8 293 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 ESYT2A0FGR8 921 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 HNRNPCL3B7ZW38 293 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 PRSS44E7EML9 344 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 MEIS1O00470 390 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 SLC22A2O15244 555 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 OR2B3O76000 313 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 MTA2O94776 668 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 APOL3O95236 402 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 NR3C2P08235 984 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 HNRNPCL4P0DMR1 293 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 SLC15A1P46059 708 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 IL5RAQ01344 420 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 PRKCEQ02156 737 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 ZNF45Q02386 682 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 AGKQ53H12 422 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 TFDP3Q5H9I0 405 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 SULT1C3Q6IMI6 304 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 PRMT9Q6P2P2 845 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 TRIM72Q6ZMU5 477 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 SNX29P2Q8IUI4 249 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 KATNAL2Q8IYT4 538 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 DCAKDQ8WVC6 231 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 HERVK_113Q902F9 699 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 TTC9Q92623 222 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 ZNF577Q9BSK1 485 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 TSEN34Q9BSV6 310 aaKnown RBP8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 ERVMER34-1Q9H9K5 563 aa8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.27□□□□□ -1.09
CRNKL1-205ENST00000496549 MROH5Q6ZUA9 1318 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 hCG_2039718K7EN88 272 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 MEN1O00255 615 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 RIMBP2O15034 1052 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 OR5F1O95221 314 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 EGFRP00533 1210 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 C7P10643 843 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 ETS1P14921 441 aa8.26□□□□□ -1.09
CRNKL1-205ENST00000496549 CASP2P42575 452 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms