RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 EIF2B4Q9UI10 523 aaKnown RBP12.58□□□□□ -0.4
MRPL55-233ENST00000495899 MFHAS1Q9Y4C4 1052 aa12.58□□□□□ -0.4
MRPL55-233ENST00000495899 ATXN2Q99700 1313 aaKnown RBP12.58□□□□□ -0.4
MRPL55-233ENST00000495899 TBC1D3DA0A087WVF3 549 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 TBC1D3IA0A087WXS9 549 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 TBC1D3EA0A087X179 549 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 TBC1D3KA0A087X1G2 549 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 TBC1D3FA6NER0 549 aaPredicted RBP12.57□□□□□ -0.4
MRPL55-233ENST00000495899 FAM47DPA6NHR8 397 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 TBC1D3LB9A6J9 549 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 KPNA3O00505 521 aaPredicted RBP12.57□□□□□ -0.4
MRPL55-233ENST00000495899 LEFTY1O75610 366 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 TMCC1O94876 653 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 FSBPO95073 299 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 IGHV4-34P06331 123 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 SYPP08247 313 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 TBC1D3HP0C7X1 549 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 IL4RP24394 825 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 NUDT1P36639 197 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 SLC1A1P43005 524 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 MAGEA1P43355 309 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 GCGRP47871 477 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 ARSEP51690 589 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 AFF3P51826 1226 aaKnown RBP12.57□□□□□ -0.4
MRPL55-233ENST00000495899 CCNHP51946 323 aaPredicted RBP12.57□□□□□ -0.4
MRPL55-233ENST00000495899 METAP1P53582 386 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 HADHBP55084 474 aaKnown RBP12.57□□□□□ -0.4
MRPL55-233ENST00000495899 RAD51Q06609 339 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 IL10RBQ08334 325 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 KRT81Q14533 505 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 MESDQ14696 234 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 RFTN1Q14699 578 aaPredicted RBP12.57□□□□□ -0.4
MRPL55-233ENST00000495899 TMCO4Q5TGY1 634 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 AGBL4Q5VU57 503 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 TBC1D3GQ6DHY5 549 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 TBC1D3CQ6IPX1 549 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 NEK5Q6P3R8 708 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 NCEH1Q6PIU2 408 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 TMCO3Q6UWJ1 677 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 LEKR1Q6ZMV7 388 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 ERN2Q76MJ5 926 aaKnown RBP12.57□□□□□ -0.4
MRPL55-233ENST00000495899 LRRC49Q8IUZ0 686 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 ARHGAP12Q8IWW6 846 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 TBC1D3Q8IZP1 549 aaPredicted RBP12.57□□□□□ -0.4
MRPL55-233ENST00000495899 ABCA7Q8IZY2 2146 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 KCTD6Q8NC69 237 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 WNT2BQ93097 391 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 CELF6Q96J87 481 aaKnown RBP12.57□□□□□ -0.4
MRPL55-233ENST00000495899 GDAP1L1Q96MZ0 367 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 EDEM2Q9BV94 578 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 OSBPL1AQ9BXW6 950 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 MIR1-1HGQ9H1L0 117 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 PDFQ9HBH1 243 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 PREBQ9HCU5 417 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 TMEM9BQ9NQ34 198 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 UBA2Q9UBT2 640 aaPredicted RBP12.57□□□□□ -0.4
MRPL55-233ENST00000495899 ACTL7AQ9Y615 435 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 WASF2Q9Y6W5 498 aa12.57□□□□□ -0.4
MRPL55-233ENST00000495899 DOCK4Q8N1I0 1966 aa12.56□□□□□ -0.4
MRPL55-233ENST00000495899 A0A1W2PPC4 97 aa12.56□□□□□ -0.4
MRPL55-233ENST00000495899 J3KR12 359 aa12.56□□□□□ -0.4
MRPL55-233ENST00000495899 CDX4O14627 284 aaPredicted RBP12.56□□□□□ -0.4
MRPL55-233ENST00000495899 LATO43561 262 aa12.56□□□□□ -0.4
MRPL55-233ENST00000495899 ENGP17813 658 aa12.56□□□□□ -0.4
MRPL55-233ENST00000495899 AMPD1P23109 780 aa12.56□□□□□ -0.4
MRPL55-233ENST00000495899 ITGB7P26010 798 aa12.56□□□□□ -0.4
MRPL55-233ENST00000495899 SERPINB6P35237 376 aa12.56□□□□□ -0.4
MRPL55-233ENST00000495899 CDH6P55285 790 aa12.56□□□□□ -0.4
MRPL55-233ENST00000495899 RHOAP61586 193 aa12.56□□□□□ -0.4
MRPL55-233ENST00000495899 GRM3Q14832 879 aa12.56□□□□□ -0.4
MRPL55-233ENST00000495899 CYTH1Q15438 398 aa12.56□□□□□ -0.4
MRPL55-233ENST00000495899 PIP5KL1Q5T9C9 394 aa12.56□□□□□ -0.4
MRPL55-233ENST00000495899 LRRC38Q5VT99 294 aa12.56□□□□□ -0.4
MRPL55-233ENST00000495899 RYBPQ8N488 228 aaPredicted RBP12.56□□□□□ -0.4
MRPL55-233ENST00000495899 NPWQ8N729 165 aa12.56□□□□□ -0.4
MRPL55-233ENST00000495899 GRIN3AQ8TCU5 1115 aa12.56□□□□□ -0.4
MRPL55-233ENST00000495899 SNX19Q92543 992 aa12.56□□□□□ -0.4
MRPL55-233ENST00000495899 CALR3Q96L12 384 aaKnown RBP12.56□□□□□ -0.4
MRPL55-233ENST00000495899 ZNF599Q96NL3 588 aa12.56□□□□□ -0.4
MRPL55-233ENST00000495899 ZNF670Q9BS34 389 aa12.56□□□□□ -0.4
MRPL55-233ENST00000495899 CPEB1Q9BZB8 566 aaKnown RBP12.56□□□□□ -0.4
MRPL55-233ENST00000495899 TM6SF2Q9BZW4 377 aa12.56□□□□□ -0.4
MRPL55-233ENST00000495899 PCDHA13Q9Y5I0 950 aa12.56□□□□□ -0.4
MRPL55-233ENST00000495899 EPN1Q9Y6I3 576 aaPredicted RBP12.56□□□□□ -0.4
MRPL55-233ENST00000495899 SPAG17Q6Q759 2223 aa12.56□□□□□ -0.4
MRPL55-233ENST00000495899 LAMA1P25391 3075 aa12.55□□□□□ -0.4
MRPL55-233ENST00000495899 A0A0A6YYK5 440 aaPredicted RBP12.55□□□□□ -0.4
MRPL55-233ENST00000495899 DFFAO00273 331 aa12.55□□□□□ -0.4
MRPL55-233ENST00000495899 KRIT1O00522 736 aa12.55□□□□□ -0.4
MRPL55-233ENST00000495899 TM4SF5O14894 197 aa12.55□□□□□ -0.4
MRPL55-233ENST00000495899 PALMO75781 387 aa12.55□□□□□ -0.4
MRPL55-233ENST00000495899 NDUFA10O95299 355 aa12.55□□□□□ -0.4
MRPL55-233ENST00000495899 IPO7O95373 1038 aaKnown RBP12.55□□□□□ -0.4
MRPL55-233ENST00000495899 IGSF6O95976 241 aa12.55□□□□□ -0.4
MRPL55-233ENST00000495899 CSNK1DP48730 415 aa12.55□□□□□ -0.4
MRPL55-233ENST00000495899 NEK3P51956 506 aa12.55□□□□□ -0.4
MRPL55-233ENST00000495899 ATXN3P54252 364 aaPredicted RBP12.55□□□□□ -0.4
MRPL55-233ENST00000495899 TAS2R38P59533 333 aa12.55□□□□□ -0.4
MRPL55-233ENST00000495899 TAS2R40P59535 323 aa12.55□□□□□ -0.4
MRPL55-233ENST00000495899 RACK1P63244 317 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms