RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 GRK2P25098 689 aa13.62□□□□□ -0.23
GPC1-209ENST00000495100 CALRP27797 417 aaKnown RBP13.62□□□□□ -0.23
GPC1-209ENST00000495100 PTPRRQ15256 657 aa13.62□□□□□ -0.23
GPC1-209ENST00000495100 MTX3Q5HYI7 312 aa13.62□□□□□ -0.23
GPC1-209ENST00000495100 OTUD3Q5T2D3 398 aaPredicted RBP13.62□□□□□ -0.23
GPC1-209ENST00000495100 GRTP1Q5TC63 336 aa13.62□□□□□ -0.23
GPC1-209ENST00000495100 KLC3Q6P597 504 aa13.62□□□□□ -0.23
GPC1-209ENST00000495100 ATG14Q6ZNE5 492 aa13.62□□□□□ -0.23
GPC1-209ENST00000495100 CEP97Q8IW35 865 aa13.62□□□□□ -0.23
GPC1-209ENST00000495100 TTC39CQ8N584 583 aa13.62□□□□□ -0.23
GPC1-209ENST00000495100 RBBP8Q99708 897 aa13.62□□□□□ -0.23
GPC1-209ENST00000495100 TBL1YQ9BQ87 522 aa13.62□□□□□ -0.23
GPC1-209ENST00000495100 S100A14Q9HCY8 104 aa13.62□□□□□ -0.23
GPC1-209ENST00000495100 EPS15L1Q9UBC2 864 aa13.62□□□□□ -0.23
GPC1-209ENST00000495100 NRCAMQ92823 1304 aa13.62□□□□□ -0.23
GPC1-209ENST00000495100 J3KR12 359 aa13.61□□□□□ -0.23
GPC1-209ENST00000495100 HNRNPCL1O60812 293 aaKnown RBP13.61□□□□□ -0.23
GPC1-209ENST00000495100 CLIC3O95833 236 aa13.61□□□□□ -0.23
GPC1-209ENST00000495100 GUCA1CO95843 209 aa13.61□□□□□ -0.23
GPC1-209ENST00000495100 PCNAP12004 261 aa13.61□□□□□ -0.23
GPC1-209ENST00000495100 ITGAXP20702 1163 aa13.61□□□□□ -0.23
GPC1-209ENST00000495100 ALDH1A3P47895 512 aa13.61□□□□□ -0.23
GPC1-209ENST00000495100 UNC93AQ86WB7 457 aa13.61□□□□□ -0.23
GPC1-209ENST00000495100 HEXDCQ8WVB3 486 aa13.61□□□□□ -0.23
GPC1-209ENST00000495100 SLC39A8Q9C0K1 460 aa13.61□□□□□ -0.23
GPC1-209ENST00000495100 CDH19Q9H159 772 aa13.61□□□□□ -0.23
GPC1-209ENST00000495100 MORF4L1Q9UBU8 362 aa13.61□□□□□ -0.23
GPC1-209ENST00000495100 FBXO5Q9UKT4 447 aa13.61□□□□□ -0.23
GPC1-209ENST00000495100 CORO1CQ9ULV4 474 aaPredicted RBP13.61□□□□□ -0.23
GPC1-209ENST00000495100 ARL5CA6NH57 179 aa13.61□□□□□ -0.23
GPC1-209ENST00000495100 I6L893 689 aaPredicted RBP13.61□□□□□ -0.23
GPC1-209ENST00000495100 PPP6CO00743 305 aa13.61□□□□□ -0.23
GPC1-209ENST00000495100 AXIN1O15169 862 aa13.61□□□□□ -0.23
GPC1-209ENST00000495100 TIMM44O43615 452 aa13.61□□□□□ -0.23
GPC1-209ENST00000495100 KIF1CO43896 1103 aaKnown RBP13.61□□□□□ -0.23
GPC1-209ENST00000495100 CKMT2P17540 419 aa13.61□□□□□ -0.23
GPC1-209ENST00000495100 CHRM3P20309 590 aa13.61□□□□□ -0.23
GPC1-209ENST00000495100 PCSK1P29120 753 aa13.61□□□□□ -0.23
GPC1-209ENST00000495100 DAOAP59103 153 aa13.61□□□□□ -0.23
GPC1-209ENST00000495100 FOLH1Q04609 750 aa13.61□□□□□ -0.23
GPC1-209ENST00000495100 C14orf80Q86SX3 495 aa13.61□□□□□ -0.23
GPC1-209ENST00000495100 TRPC4APQ8TEL6 797 aa13.61□□□□□ -0.23
GPC1-209ENST00000495100 LRRC39Q96DD0 335 aa13.61□□□□□ -0.23
GPC1-209ENST00000495100 MLPHQ9BV36 600 aaPredicted RBP13.61□□□□□ -0.23
GPC1-209ENST00000495100 A0A088AWK7 358 aa13.61□□□□□ -0.23
GPC1-209ENST00000495100 A0A1W2PQH9 124 aa13.61□□□□□ -0.23
GPC1-209ENST00000495100 TIPRLO75663 272 aa13.61□□□□□ -0.23
GPC1-209ENST00000495100 WNT3AP56704 352 aa13.61□□□□□ -0.23
GPC1-209ENST00000495100 RARS2Q5T160 578 aaKnown RBP13.61□□□□□ -0.23
GPC1-209ENST00000495100 MAVSQ7Z434 540 aa13.61□□□□□ -0.23
GPC1-209ENST00000495100 ZNF410Q86VK4 478 aa13.61□□□□□ -0.23
GPC1-209ENST00000495100 THEM5Q8N1Q8 247 aa13.61□□□□□ -0.23
GPC1-209ENST00000495100 TBATAQ96M53 351 aa13.61□□□□□ -0.23
GPC1-209ENST00000495100 CENPKQ9BS16 269 aa13.61□□□□□ -0.23
GPC1-209ENST00000495100 APOL5Q9BWW9 433 aa13.61□□□□□ -0.23
GPC1-209ENST00000495100 FRMD8Q9BZ67 464 aaPredicted RBP13.61□□□□□ -0.23
GPC1-209ENST00000495100 AGO3Q9H9G7 860 aaKnown RBP13.61□□□□□ -0.23
GPC1-209ENST00000495100 TMLHEQ9NVH6 421 aa13.61□□□□□ -0.23
GPC1-209ENST00000495100 DOCK3Q8IZD9 2030 aa13.61□□□□□ -0.23
GPC1-209ENST00000495100 ZBBXA8MT70 800 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 CBX4O00257 560 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 LINC00032P0C843 101 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 FMO4P31512 558 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 PNPLA4P41247 253 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 SLC1A2P43004 574 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 PTPN9P43378 593 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 ACTR3P61158 418 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 ITGA7Q13683 1181 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 PDK3Q15120 406 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 ZNF598Q86UK7 904 aaKnown RBP13.6□□□□□ -0.23
GPC1-209ENST00000495100 ZNF512Q96ME7 567 aaPredicted RBP13.6□□□□□ -0.23
GPC1-209ENST00000495100 KCNA7Q96RP8 456 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 MID1IP1Q9NPA3 183 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 CYLDQ9NQC7 956 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 TRMT13Q9NUP7 481 aaKnown RBP13.6□□□□□ -0.23
GPC1-209ENST00000495100 FLRT1Q9NZU1 646 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 UXTQ9UBK9 157 aaPredicted RBP13.6□□□□□ -0.23
GPC1-209ENST00000495100 ZNF212Q9UDV6 495 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 CIDEBQ9UHD4 219 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 WNK3Q9BYP7 1800 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 PTGESO14684 152 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 CNTN5O94779 1100 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 AP2A1O95782 977 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 RPL17P18621 184 aaKnown RBP13.6□□□□□ -0.23
GPC1-209ENST00000495100 GRIA3P42263 894 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 CD151P48509 253 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 SPANXN3Q5MJ09 141 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 IRGCQ6NXR0 463 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 TTC9BQ8N6N2 239 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 LRRC52Q8N7C0 313 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 ZNF398Q8TD17 642 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 CASP10Q92851 521 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 PARK7Q99497 189 aaKnown RBP13.6□□□□□ -0.23
GPC1-209ENST00000495100 DHRS4Q9BTZ2 278 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 NRXN2Q9P2S2 1712 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 HDAC3O15379 428 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 THRAP10827 490 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 TPSB2P20231 275 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 DNAJB2P25686 324 aa13.6□□□□□ -0.23
GPC1-209ENST00000495100 OR1E1P30953 314 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms