RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 LY6G6EA0A0G2JKS1 128 aa22.46■■□□□ 1.19
HDDC3-203ENST00000494993 SPTY2D1-AS1A0A0U1RR47 76 aa22.46■■□□□ 1.19
HDDC3-203ENST00000494993 OPA1O60313 960 aa22.46■■□□□ 1.19
HDDC3-203ENST00000494993 GFPT2O94808 682 aa22.46■■□□□ 1.19
HDDC3-203ENST00000494993 RHOQP17081 205 aa22.46■■□□□ 1.19
HDDC3-203ENST00000494993 SDC4P31431 198 aa22.46■■□□□ 1.19
HDDC3-203ENST00000494993 RABIFP47224 123 aa22.46■■□□□ 1.19
HDDC3-203ENST00000494993 FMO1Q01740 532 aa22.46■■□□□ 1.19
HDDC3-203ENST00000494993 CDR2Q01850 454 aa22.46■■□□□ 1.19
HDDC3-203ENST00000494993 TBC1D25Q3MII6 688 aa22.46■■□□□ 1.19
HDDC3-203ENST00000494993 CCDC14Q49A88 953 aa22.46■■□□□ 1.19
HDDC3-203ENST00000494993 CT47A1Q5JQC4 288 aaPredicted RBP22.46■■□□□ 1.19
HDDC3-203ENST00000494993 CDCP2Q5VXM1 449 aa22.46■■□□□ 1.19
HDDC3-203ENST00000494993 RWDD4Q6NW29 188 aaKnown RBP22.46■■□□□ 1.19
HDDC3-203ENST00000494993 FAM181AQ8N9Y4 354 aa22.46■■□□□ 1.19
HDDC3-203ENST00000494993 OR6K2Q8NGY2 324 aa22.46■■□□□ 1.19
HDDC3-203ENST00000494993 RAB7BQ96AH8 199 aa22.46■■□□□ 1.19
HDDC3-203ENST00000494993 LENG8Q96PV6 779 aaPredicted RBP22.46■■□□□ 1.19
HDDC3-203ENST00000494993 DUSP23Q9BVJ7 150 aa22.46■■□□□ 1.19
HDDC3-203ENST00000494993 C1QTNF2Q9BXJ5 285 aa22.46■■□□□ 1.19
HDDC3-203ENST00000494993 OSBPL2Q9H1P3 480 aa22.46■■□□□ 1.19
HDDC3-203ENST00000494993 USP29Q9HBJ7 922 aa22.46■■□□□ 1.19
HDDC3-203ENST00000494993 TMEM248Q9NWD8 314 aa22.46■■□□□ 1.19
HDDC3-203ENST00000494993 DNAI1Q9UI46 699 aa22.46■■□□□ 1.19
HDDC3-203ENST00000494993 NEU3Q9UQ49 428 aa22.46■■□□□ 1.19
HDDC3-203ENST00000494993 U3KQA8 63 aa22.46■■□□□ 1.19
HDDC3-203ENST00000494993 C2CD4BA6NLJ0 364 aa22.45■■□□□ 1.18
HDDC3-203ENST00000494993 C16orf96A6NNT2 1141 aa22.45■■□□□ 1.18
HDDC3-203ENST00000494993 K7ESM1 405 aa22.45■■□□□ 1.18
HDDC3-203ENST00000494993 TSPAN6O43657 245 aa22.45■■□□□ 1.18
HDDC3-203ENST00000494993 NEBLO76041 1014 aa22.45■■□□□ 1.18
HDDC3-203ENST00000494993 CSF2P04141 144 aa22.45■■□□□ 1.18
HDDC3-203ENST00000494993 GP1BAP07359 652 aa22.45■■□□□ 1.18
HDDC3-203ENST00000494993 MYF5P13349 255 aa22.45■■□□□ 1.18
HDDC3-203ENST00000494993 NME1P15531 152 aaKnown RBP22.45■■□□□ 1.18
HDDC3-203ENST00000494993 CHRNB2P17787 502 aa22.45■■□□□ 1.18
HDDC3-203ENST00000494993 GKP32189 559 aa22.45■■□□□ 1.18
HDDC3-203ENST00000494993 ABL2P42684 1182 aa22.45■■□□□ 1.18
HDDC3-203ENST00000494993 DUSP3P51452 185 aaPredicted RBP22.45■■□□□ 1.18
HDDC3-203ENST00000494993 GEMIN4P57678 1058 aaKnown RBP22.45■■□□□ 1.18
HDDC3-203ENST00000494993 SGCGQ13326 291 aa22.45■■□□□ 1.18
HDDC3-203ENST00000494993 STRADAQ7RTN6 431 aa22.45■■□□□ 1.18
HDDC3-203ENST00000494993 PHLDB2Q86SQ0 1253 aa22.45■■□□□ 1.18
HDDC3-203ENST00000494993 PARGQ86W56 976 aa22.45■■□□□ 1.18
HDDC3-203ENST00000494993 RYBPQ8N488 228 aaPredicted RBP22.45■■□□□ 1.18
HDDC3-203ENST00000494993 ZNF548Q8NEK5 533 aaPredicted RBP22.45■■□□□ 1.18
HDDC3-203ENST00000494993 JOSD2Q8TAC2 188 aa22.45■■□□□ 1.18
HDDC3-203ENST00000494993 KLF6Q99612 283 aaPredicted RBP22.45■■□□□ 1.18
HDDC3-203ENST00000494993 C11orf70Q9BRQ4 267 aa22.45■■□□□ 1.18
HDDC3-203ENST00000494993 MAGEH1Q9H213 219 aa22.45■■□□□ 1.18
HDDC3-203ENST00000494993 EVA1BQ9NVM1 165 aa22.45■■□□□ 1.18
HDDC3-203ENST00000494993 RAI2Q9Y5P3 530 aa22.45■■□□□ 1.18
HDDC3-203ENST00000494993 GCN1Q92616 2671 aaKnown RBP22.45■■□□□ 1.18
HDDC3-203ENST00000494993 IGLON5A6NGN9 336 aa22.44■■□□□ 1.18
HDDC3-203ENST00000494993 FAM72CH0Y354 149 aa22.44■■□□□ 1.18
HDDC3-203ENST00000494993 H3BM21 787 aa22.44■■□□□ 1.18
HDDC3-203ENST00000494993 FPGTO14772 594 aa22.44■■□□□ 1.18
HDDC3-203ENST00000494993 GSRP00390 522 aa22.44■■□□□ 1.18
HDDC3-203ENST00000494993 PTPN9P43378 593 aa22.44■■□□□ 1.18
HDDC3-203ENST00000494993 KLK7P49862 253 aa22.44■■□□□ 1.18
HDDC3-203ENST00000494993 POLD3Q15054 466 aaPredicted RBP22.44■■□□□ 1.18
HDDC3-203ENST00000494993 ZNF805Q5CZA5 627 aa22.44■■□□□ 1.18
HDDC3-203ENST00000494993 FAM72AQ5TYM5 149 aa22.44■■□□□ 1.18
HDDC3-203ENST00000494993 FAM72DQ6L9T8 149 aa22.44■■□□□ 1.18
HDDC3-203ENST00000494993 FAM72BQ86X60 149 aa22.44■■□□□ 1.18
HDDC3-203ENST00000494993 OR2AP1Q8NGE2 309 aa22.44■■□□□ 1.18
HDDC3-203ENST00000494993 SLC30A5Q8TAD4 765 aa22.44■■□□□ 1.18
HDDC3-203ENST00000494993 GPT2Q8TD30 523 aa22.44■■□□□ 1.18
HDDC3-203ENST00000494993 TBC1D31Q96DN5 1066 aa22.44■■□□□ 1.18
HDDC3-203ENST00000494993 DEPDC7Q96QD5 511 aa22.44■■□□□ 1.18
HDDC3-203ENST00000494993 MAGEB5Q9BZ81 275 aa22.44■■□□□ 1.18
HDDC3-203ENST00000494993 GGT7Q9UJ14 662 aa22.44■■□□□ 1.18
HDDC3-203ENST00000494993 HPCAL4Q9UM19 191 aa22.44■■□□□ 1.18
HDDC3-203ENST00000494993 ITM2BQ9Y287 266 aa22.44■■□□□ 1.18
HDDC3-203ENST00000494993 KIF26BQ2KJY2 2108 aa22.43■■□□□ 1.18
HDDC3-203ENST00000494993 NEMP1O14524 444 aa22.43■■□□□ 1.18
HDDC3-203ENST00000494993 LRIG2O94898 1065 aa22.43■■□□□ 1.18
HDDC3-203ENST00000494993 GJB6O95452 261 aa22.43■■□□□ 1.18
HDDC3-203ENST00000494993 SOX5P35711 763 aa22.43■■□□□ 1.18
HDDC3-203ENST00000494993 JAM2P57087 298 aa22.43■■□□□ 1.18
HDDC3-203ENST00000494993 POLR2FP61218 127 aaKnown RBP22.43■■□□□ 1.18
HDDC3-203ENST00000494993 SNRPD1P62314 119 aaKnown RBP22.43■■□□□ 1.18
HDDC3-203ENST00000494993 PDE1CQ14123 709 aaPredicted RBP22.43■■□□□ 1.18
HDDC3-203ENST00000494993 TRIM72Q6ZMU5 477 aa22.43■■□□□ 1.18
HDDC3-203ENST00000494993 DENND6BQ8NEG7 585 aa22.43■■□□□ 1.18
HDDC3-203ENST00000494993 ASB12Q8WXK4 309 aa22.43■■□□□ 1.18
HDDC3-203ENST00000494993 CENPIQ92674 756 aaPredicted RBP22.43■■□□□ 1.18
HDDC3-203ENST00000494993 VOPP1Q96AW1 172 aa22.43■■□□□ 1.18
HDDC3-203ENST00000494993 FCRL3Q96P31 734 aaPredicted RBP22.43■■□□□ 1.18
HDDC3-203ENST00000494993 VPS16Q9H269 839 aa22.43■■□□□ 1.18
HDDC3-203ENST00000494993 IPO11Q9UI26 975 aaKnown RBP22.43■■□□□ 1.18
HDDC3-203ENST00000494993 CSNK1G3Q9Y6M4 447 aa22.43■■□□□ 1.18
HDDC3-203ENST00000494993 ANKRD36A6QL64 1941 aa22.42■■□□□ 1.18
HDDC3-203ENST00000494993 KRIT1O00522 736 aa22.42■■□□□ 1.18
HDDC3-203ENST00000494993 SPINT1O43278 529 aa22.42■■□□□ 1.18
HDDC3-203ENST00000494993 RAMP2O60895 175 aa22.42■■□□□ 1.18
HDDC3-203ENST00000494993 UGT2B4P06133 528 aa22.42■■□□□ 1.18
HDDC3-203ENST00000494993 PLEKP08567 350 aaPredicted RBP22.42■■□□□ 1.18
HDDC3-203ENST00000494993 HDAC4P56524 1084 aa22.42■■□□□ 1.18
HDDC3-203ENST00000494993 CCDC173Q0VFZ6 552 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms