RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 TCEAL4Q96EI5 215 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 FEM1CQ96JP0 617 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 ZNF317Q96PQ6 595 aaPredicted RBP6.89□□□□□ -1.31
MSH5-217ENST00000494458 TBL1YQ9BQ87 522 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 CORO1BQ9BR76 489 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 PBX4Q9BYU1 374 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 POLR1EQ9GZS1 481 aaKnown RBP6.89□□□□□ -1.31
MSH5-217ENST00000494458 NACA2Q9H009 215 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 ATXN3LQ9H3M9 355 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 TRPV4Q9HBA0 871 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 HCFC1R1Q9NWW0 138 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 MARK1Q9P0L2 795 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 SEPT3Q9UH03 358 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 ARIH1Q9Y4X5 557 aaPredicted RBP6.89□□□□□ -1.31
MSH5-217ENST00000494458 HCFC2Q9Y5Z7 792 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 MYO18AQ92614 2054 aaKnown RBP6.89□□□□□ -1.31
MSH5-217ENST00000494458 A0A1W2PPM1 405 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 ZNF197O14709 1029 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 CCL16O15467 120 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 FZD6O60353 706 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 USP12O75317 370 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 ZNF821O75541 412 aaPredicted RBP6.88□□□□□ -1.31
MSH5-217ENST00000494458 RFPL1O75677 317 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 ASMTLO95671 621 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 CPP00450 1065 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 ALADP13716 330 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 LSP1P33241 339 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 CCNFP41002 786 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 SERPINB9P50453 376 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 MGAT5Q09328 741 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 EFTUD2Q15029 972 aaKnown RBP eCLIP6.88□□□□□ -1.31
MSH5-217ENST00000494458 SLC1A5Q15758 541 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 CERCAMQ5T4B2 595 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 STXBP5Q5T5C0 1151 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 TEDDM1Q5T9Z0 273 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 METTL3Q86U44 580 aaKnown RBP6.88□□□□□ -1.31
MSH5-217ENST00000494458 BBS7Q8IWZ6 715 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 PLPP6Q8IY26 295 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 DCAF4L2Q8NA75 395 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 VN1R2Q8NFZ6 395 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 WFDC5Q8TCV5 224 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 ACMSDQ8TDX5 336 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 SCG3Q8WXD2 468 aaKnown RBP6.88□□□□□ -1.31
MSH5-217ENST00000494458 ZBTB9Q96C00 473 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 CERS2Q96G23 380 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 SGSM3Q96HU1 749 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 ABHD8Q96I13 439 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 NUDCD1Q96RS6 583 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 TRIM56Q9BRZ2 755 aaKnown RBP6.88□□□□□ -1.31
MSH5-217ENST00000494458 EPN3Q9H201 632 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 SP110Q9HB58 689 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 CHRAC1Q9NRG0 131 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 ABCB8Q9NUT2 735 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 TDP1Q9NUW8 608 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 SMPD4Q9NXE4 827 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.88□□□□□ -1.31
MSH5-217ENST00000494458 CFAP97Q9P2B7 532 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 TBC1D14Q9P2M4 693 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 LSM7Q9UK45 103 aaKnown RBP6.88□□□□□ -1.31
MSH5-217ENST00000494458 INTS6Q9UL03 887 aaKnown RBP6.88□□□□□ -1.31
MSH5-217ENST00000494458 SMG5Q9UPR3 1016 aaKnown RBP6.88□□□□□ -1.31
MSH5-217ENST00000494458 CCL26Q9Y258 94 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 TCAF1Q9Y4C2 921 aa6.88□□□□□ -1.31
MSH5-217ENST00000494458 LAMA2P24043 3122 aaKnown RBP6.88□□□□□ -1.31
MSH5-217ENST00000494458 TRANK1O15050 2925 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 IQANK1A0A1B0GTG1 560 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 CCDC195A0A1B0GUA6 201 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 TMEM120BA0PK00 339 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 EPOPA6NHQ4 379 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 POC1B-GALNT4F8VUJ3 575 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 LDB2O43679 373 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 TBL1XO60907 577 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 RHOCP08134 193 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 SNRPAP09012 282 aaKnown RBP6.87□□□□□ -1.31
MSH5-217ENST00000494458 MYL4P12829 197 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 BRAFP15056 766 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 CHN1P15882 459 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 HLA-DPA1P20036 260 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 GLDCP23378 1020 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 MZF1P28698 734 aaPredicted RBP6.87□□□□□ -1.31
MSH5-217ENST00000494458 CD86P42081 329 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 ETV4P43268 484 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 RGRP47804 291 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 POLD2P49005 469 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 LMAN1P49257 510 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 NEK3P51956 506 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 CSE1LP55060 971 aaKnown RBP6.87□□□□□ -1.31
MSH5-217ENST00000494458 WDR4P57081 412 aaKnown RBP6.87□□□□□ -1.31
MSH5-217ENST00000494458 SESN2P58004 480 aaPredicted RBP6.87□□□□□ -1.31
MSH5-217ENST00000494458 CRADDP78560 199 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 GUCY1A3Q02108 690 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 DSC2Q02487 901 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 CDK18Q07002 472 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 MTM1Q13496 603 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 DMC1Q14565 340 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 COL19A1Q14993 1142 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 TEAD2Q15562 447 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 RAB30Q15771 203 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 GPR158Q5T848 1215 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 GRTP1Q5TC63 336 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms