RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 L1CAMP32004 1257 aa13.63□□□□□ -0.23
CTDSP1-212ENST00000494067 CCNHP51946 323 aaPredicted RBP13.63□□□□□ -0.23
CTDSP1-212ENST00000494067 RAD51Q06609 339 aa13.63□□□□□ -0.23
CTDSP1-212ENST00000494067 DNAJC3Q13217 504 aa13.63□□□□□ -0.23
CTDSP1-212ENST00000494067 SGCGQ13326 291 aa13.63□□□□□ -0.23
CTDSP1-212ENST00000494067 MAPK8IP2Q13387 824 aaPredicted RBP13.63□□□□□ -0.23
CTDSP1-212ENST00000494067 EFHC2Q5JST6 749 aa13.63□□□□□ -0.23
CTDSP1-212ENST00000494067 PPP1R2P3Q6NXS1 205 aa13.63□□□□□ -0.23
CTDSP1-212ENST00000494067 PLPP6Q8IY26 295 aa13.63□□□□□ -0.23
CTDSP1-212ENST00000494067 MDM1Q8TC05 714 aa13.63□□□□□ -0.23
CTDSP1-212ENST00000494067 RAB7BQ96AH8 199 aa13.63□□□□□ -0.23
CTDSP1-212ENST00000494067 ARHGEF26Q96DR7 871 aa13.63□□□□□ -0.23
CTDSP1-212ENST00000494067 MCEEQ96PE7 176 aa13.63□□□□□ -0.23
CTDSP1-212ENST00000494067 FUCA2Q9BTY2 467 aa13.63□□□□□ -0.23
CTDSP1-212ENST00000494067 TM6SF2Q9BZW4 377 aa13.63□□□□□ -0.23
CTDSP1-212ENST00000494067 ZDHHC6Q9H6R6 413 aa13.63□□□□□ -0.23
CTDSP1-212ENST00000494067 KLHL11Q9NVR0 708 aa13.63□□□□□ -0.23
CTDSP1-212ENST00000494067 DONSONQ9NYP3 566 aa13.63□□□□□ -0.23
CTDSP1-212ENST00000494067 DKK4Q9UBT3 224 aa13.63□□□□□ -0.23
CTDSP1-212ENST00000494067 IPO11Q9UI26 975 aaKnown RBP13.63□□□□□ -0.23
CTDSP1-212ENST00000494067 GGT7Q9UJ14 662 aa13.63□□□□□ -0.23
CTDSP1-212ENST00000494067 NEMP2A6NFY4 417 aa13.62□□□□□ -0.23
CTDSP1-212ENST00000494067 ZSCAN5CA6NGD5 496 aaPredicted RBP13.62□□□□□ -0.23
CTDSP1-212ENST00000494067 SIGLEC16A6NMB1 481 aa13.62□□□□□ -0.23
CTDSP1-212ENST00000494067 A6NNZ2 444 aa13.62□□□□□ -0.23
CTDSP1-212ENST00000494067 ATMINO43313 823 aaPredicted RBP13.62□□□□□ -0.23
CTDSP1-212ENST00000494067 SDC3O75056 442 aa13.62□□□□□ -0.23
CTDSP1-212ENST00000494067 MBD3O95983 291 aa13.62□□□□□ -0.23
CTDSP1-212ENST00000494067 ABL2P42684 1182 aa13.62□□□□□ -0.23
CTDSP1-212ENST00000494067 CLDN2P57739 230 aa13.62□□□□□ -0.23
CTDSP1-212ENST00000494067 DAB2P98082 770 aa13.62□□□□□ -0.23
CTDSP1-212ENST00000494067 TMEM259Q4ZIN3 620 aa13.62□□□□□ -0.23
CTDSP1-212ENST00000494067 SFMBT2Q5VUG0 894 aa13.62□□□□□ -0.23
CTDSP1-212ENST00000494067 DNAJC24Q6P3W2 148 aa13.62□□□□□ -0.23
CTDSP1-212ENST00000494067 SCYL2Q6P3W7 929 aa13.62□□□□□ -0.23
CTDSP1-212ENST00000494067 GCNT7Q6ZNI0 430 aa13.62□□□□□ -0.23
CTDSP1-212ENST00000494067 PARS2Q7L3T8 475 aaKnown RBP13.62□□□□□ -0.23
CTDSP1-212ENST00000494067 MCOLN2Q8IZK6 566 aa13.62□□□□□ -0.23
CTDSP1-212ENST00000494067 SLC22A18ASQ8N1D0 253 aa13.62□□□□□ -0.23
CTDSP1-212ENST00000494067 ARFGAP1Q8N6T3 406 aa13.62□□□□□ -0.23
CTDSP1-212ENST00000494067 NTAN1Q96AB6 310 aa13.62□□□□□ -0.23
CTDSP1-212ENST00000494067 NAP1L5Q96NT1 182 aaPredicted RBP13.62□□□□□ -0.23
CTDSP1-212ENST00000494067 OSBPL1AQ9BXW6 950 aa13.62□□□□□ -0.23
CTDSP1-212ENST00000494067 TRIM7Q9C029 511 aa13.62□□□□□ -0.23
CTDSP1-212ENST00000494067 CATSPERBQ9H7T0 1116 aa13.62□□□□□ -0.23
CTDSP1-212ENST00000494067 RTN4Q9NQC3 1192 aaKnown RBP13.62□□□□□ -0.23
CTDSP1-212ENST00000494067 ITM2BQ9Y287 266 aa13.62□□□□□ -0.23
CTDSP1-212ENST00000494067 HS3ST3A1Q9Y663 406 aa13.62□□□□□ -0.23
CTDSP1-212ENST00000494067 CHD6Q8TD26 2715 aa13.62□□□□□ -0.23
CTDSP1-212ENST00000494067 LRRK1Q38SD2 2015 aa13.61□□□□□ -0.23
CTDSP1-212ENST00000494067 LRRC53A6NM62 1247 aa13.61□□□□□ -0.23
CTDSP1-212ENST00000494067 H3BM21 787 aa13.61□□□□□ -0.23
CTDSP1-212ENST00000494067 KRIT1O00522 736 aa13.61□□□□□ -0.23
CTDSP1-212ENST00000494067 RAD51BO15315 384 aa13.61□□□□□ -0.23
CTDSP1-212ENST00000494067 TSPAN6O43657 245 aa13.61□□□□□ -0.23
CTDSP1-212ENST00000494067 BUB1O43683 1085 aa13.61□□□□□ -0.23
CTDSP1-212ENST00000494067 AP1G1O43747 822 aa13.61□□□□□ -0.23
CTDSP1-212ENST00000494067 POP4O95707 220 aaKnown RBP13.61□□□□□ -0.23
CTDSP1-212ENST00000494067 FERP16591 822 aa13.61□□□□□ -0.23
CTDSP1-212ENST00000494067 EPHB2P29323 1055 aa13.61□□□□□ -0.23
CTDSP1-212ENST00000494067 ACADVLP49748 655 aa13.61□□□□□ -0.23
CTDSP1-212ENST00000494067 AIF1P55008 147 aa13.61□□□□□ -0.23
CTDSP1-212ENST00000494067 E2F1Q01094 437 aa13.61□□□□□ -0.23
CTDSP1-212ENST00000494067 C1QBPQ07021 282 aaKnown RBP13.61□□□□□ -0.23
CTDSP1-212ENST00000494067 CYP4F3Q08477 520 aa13.61□□□□□ -0.23
CTDSP1-212ENST00000494067 ZNF211Q13398 564 aaPredicted RBP13.61□□□□□ -0.23
CTDSP1-212ENST00000494067 CAMK2BQ13554 666 aa13.61□□□□□ -0.23
CTDSP1-212ENST00000494067 ATXN7L2Q5T6C5 722 aaPredicted RBP13.61□□□□□ -0.23
CTDSP1-212ENST00000494067 ACAD10Q6JQN1 1059 aa13.61□□□□□ -0.23
CTDSP1-212ENST00000494067 DCUN1D2Q6PH85 259 aa13.61□□□□□ -0.23
CTDSP1-212ENST00000494067 CYP4V2Q6ZWL3 525 aaPredicted RBP13.61□□□□□ -0.23
CTDSP1-212ENST00000494067 OR13H1Q8NG92 308 aa13.61□□□□□ -0.23
CTDSP1-212ENST00000494067 OR2AP1Q8NGE2 309 aa13.61□□□□□ -0.23
CTDSP1-212ENST00000494067 CASKIN2Q8WXE0 1202 aa13.61□□□□□ -0.23
CTDSP1-212ENST00000494067 NXPE2Q96DL1 559 aa13.61□□□□□ -0.23
CTDSP1-212ENST00000494067 IFT43Q96FT9 208 aa13.61□□□□□ -0.23
CTDSP1-212ENST00000494067 PEBP4Q96S96 227 aa13.61□□□□□ -0.23
CTDSP1-212ENST00000494067 SLC17A9Q9BYT1 436 aa13.61□□□□□ -0.23
CTDSP1-212ENST00000494067 TTYH3Q9C0H2 523 aa13.61□□□□□ -0.23
CTDSP1-212ENST00000494067 GPATCH2LQ9NWQ4 482 aa13.61□□□□□ -0.23
CTDSP1-212ENST00000494067 FZD10Q9ULW2 581 aa13.61□□□□□ -0.23
CTDSP1-212ENST00000494067 FADS3Q9Y5Q0 445 aa13.61□□□□□ -0.23
CTDSP1-212ENST00000494067 COL27A1Q8IZC6 1860 aaPredicted RBP13.61□□□□□ -0.23
CTDSP1-212ENST00000494067 MYLKQ15746 1914 aa13.6□□□□□ -0.23
CTDSP1-212ENST00000494067 TMCO5BA8MYB1 307 aa13.6□□□□□ -0.23
CTDSP1-212ENST00000494067 FPGTO14772 594 aa13.6□□□□□ -0.23
CTDSP1-212ENST00000494067 KDELR3O43731 214 aa13.6□□□□□ -0.23
CTDSP1-212ENST00000494067 PAK4O96013 591 aaPredicted RBP13.6□□□□□ -0.23
CTDSP1-212ENST00000494067 GSRP00390 522 aa13.6□□□□□ -0.23
CTDSP1-212ENST00000494067 GIMD1P0DJR0 217 aa13.6□□□□□ -0.23
CTDSP1-212ENST00000494067 ITIH2P19823 946 aa13.6□□□□□ -0.23
CTDSP1-212ENST00000494067 TNFAIP3P21580 790 aa13.6□□□□□ -0.23
CTDSP1-212ENST00000494067 ACP1P24666 158 aa13.6□□□□□ -0.23
CTDSP1-212ENST00000494067 ZNF143P52747 638 aaPredicted RBP13.6□□□□□ -0.23
CTDSP1-212ENST00000494067 YBEYP58557 167 aaPredicted RBP13.6□□□□□ -0.23
CTDSP1-212ENST00000494067 HNRNPKP61978 463 aaKnown RBP eCLIP13.6□□□□□ -0.23
CTDSP1-212ENST00000494067 IQCB1Q15051 598 aa13.6□□□□□ -0.23
CTDSP1-212ENST00000494067 CA9Q16790 459 aa13.6□□□□□ -0.23
CTDSP1-212ENST00000494067 FILIP1LQ4L180 1135 aa13.6□□□□□ -0.23
CTDSP1-212ENST00000494067 ZNF805Q5CZA5 627 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms