RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 VWA8A3KMH1 1905 aa7.2□□□□□ -1.26
TPR-208ENST00000492973 A0A0C4DFX4 3053 aa7.2□□□□□ -1.26
TPR-208ENST00000492973 EIF3CLB5ME19 914 aaKnown RBP7.19□□□□□ -1.26
TPR-208ENST00000492973 H3BQ06 376 aaPredicted RBP7.19□□□□□ -1.26
TPR-208ENST00000492973 NEMP1O14524 444 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 PRRG1O14668 218 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 ZNF263O14978 683 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 FOXD2O60548 495 aaPredicted RBP7.19□□□□□ -1.26
TPR-208ENST00000492973 NDUFA10O95299 355 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 LCA5LO95447 670 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 CCDC172P0C7W6 258 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 CCDC130P13994 396 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 CHRNB2P17787 502 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 KCNA5P22460 613 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 CYP2F1P24903 491 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 ELF1P32519 619 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 CYLC1P35663 651 aaPredicted RBP7.19□□□□□ -1.26
TPR-208ENST00000492973 USP8P40818 1118 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 MAGEA11P43364 429 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 GPR15P49685 360 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 YWHAEP62258 255 aaKnown RBP7.19□□□□□ -1.26
TPR-208ENST00000492973 PPP2CBP62714 309 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 PPP2CAP67775 309 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 SMARCB1Q12824 385 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 CLUL1Q15846 466 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 CFAP221Q4G0U5 840 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 RARS2Q5T160 578 aaKnown RBP7.19□□□□□ -1.26
TPR-208ENST00000492973 LIN9Q5TKA1 542 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 TMEM270Q6UE05 265 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 CCDC149Q6ZUS6 474 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 TOGARAM2Q6ZUX3 1019 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 C11orf74Q86VG3 221 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 FMNL3Q8IVF7 1028 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 FUKQ8N0W3 1084 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 OR5AN1Q8NGI8 311 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 SLC30A5Q8TAD4 765 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 SPPL2BQ8TCT7 592 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 SLC2A14Q8TDB8 520 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 C2orf15Q8WU43 125 aaKnown RBP7.19□□□□□ -1.26
TPR-208ENST00000492973 TFAP2BQ92481 460 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 USP7Q93009 1102 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 PCED1BQ96HM7 432 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 TMEM176AQ96HP8 235 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 FUBP3Q96I24 572 aaKnown RBP eCLIP7.19□□□□□ -1.26
TPR-208ENST00000492973 TNIP3Q96KP6 325 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 CCDC42Q96M95 316 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 RBM15Q96T37 977 aaKnown RBP eCLIP7.19□□□□□ -1.269e-6■□□□□ 8.2
TPR-208ENST00000492973 EIF3CQ99613 913 aaKnown RBP7.19□□□□□ -1.26
TPR-208ENST00000492973 HNRNPABQ99729 332 aaKnown RBP7.19□□□□□ -1.26
TPR-208ENST00000492973 AGPAT1Q99943 283 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 SSBP3Q9BWW4 388 aaPredicted RBP7.19□□□□□ -1.26
TPR-208ENST00000492973 SEMA4AQ9H3S1 761 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 POFUT1Q9H488 388 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 IFT22Q9H7X7 185 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 SFXN1Q9H9B4 322 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 ACP6Q9NPH0 428 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 FAM49BQ9NUQ9 324 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 ZDHHC7Q9NXF8 308 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 USP36Q9P275 1121 aaKnown RBP7.19□□□□□ -1.26
TPR-208ENST00000492973 HSFX1Q9UBD0 423 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 CDH22Q9UJ99 828 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 REXO2Q9Y3B8 237 aaKnown RBP7.19□□□□□ -1.26
TPR-208ENST00000492973 INSL5Q9Y5Q6 135 aa7.19□□□□□ -1.26
TPR-208ENST00000492973 TTC28Q96AY4 2481 aa7.18□□□□□ -1.26
TPR-208ENST00000492973 A0A087X0T9 212 aa7.18□□□□□ -1.26
TPR-208ENST00000492973 CCDC195A0A1B0GUA6 201 aa7.18□□□□□ -1.26
TPR-208ENST00000492973 O00370 1275 aa7.18□□□□□ -1.26
TPR-208ENST00000492973 CCL16O15467 120 aa7.18□□□□□ -1.26
TPR-208ENST00000492973 AKR1B10O60218 316 aa7.18□□□□□ -1.26
TPR-208ENST00000492973 POU2F2P09086 479 aa7.18□□□□□ -1.26
TPR-208ENST00000492973 PAEPP09466 180 aa7.18□□□□□ -1.26
TPR-208ENST00000492973 HNRNPA1P09651 372 aaKnown RBP eCLIP7.18□□□□□ -1.26
TPR-208ENST00000492973 FAM228BP0C875 321 aa7.18□□□□□ -1.26
TPR-208ENST00000492973 SRGAP2BP0DMP2 458 aa7.18□□□□□ -1.26
TPR-208ENST00000492973 VDRP11473 427 aa7.18□□□□□ -1.26
TPR-208ENST00000492973 KRT5P13647 590 aa7.18□□□□□ -1.26
TPR-208ENST00000492973 CYP11B1P15538 503 aa7.18□□□□□ -1.26
TPR-208ENST00000492973 HOXB8P17481 243 aaPredicted RBP7.18□□□□□ -1.26
TPR-208ENST00000492973 ATF6P18850 670 aa7.18□□□□□ -1.26
TPR-208ENST00000492973 TNFAIP3P21580 790 aa7.18□□□□□ -1.26
TPR-208ENST00000492973 BDNFP23560 247 aa7.18□□□□□ -1.26
TPR-208ENST00000492973 ADORA2BP29275 332 aa7.18□□□□□ -1.26
TPR-208ENST00000492973 HOXA9P31269 272 aa7.18□□□□□ -1.26
TPR-208ENST00000492973 LSP1P33241 339 aa7.18□□□□□ -1.26
TPR-208ENST00000492973 MAGEA1P43355 309 aa7.18□□□□□ -1.26
TPR-208ENST00000492973 ID4P47928 161 aa7.18□□□□□ -1.26
TPR-208ENST00000492973 TUFMP49411 452 aaKnown RBP7.18□□□□□ -1.26
TPR-208ENST00000492973 BPIFB4P59827 614 aa7.18□□□□□ -1.26
TPR-208ENST00000492973 TFF2Q03403 129 aa7.18□□□□□ -1.26
TPR-208ENST00000492973 TWF1Q12792 350 aa7.18□□□□□ -1.26
TPR-208ENST00000492973 MAPRE1Q15691 268 aaKnown RBP7.18□□□□□ -1.26
TPR-208ENST00000492973 MGAT5BQ3V5L5 792 aa7.18□□□□□ -1.26
TPR-208ENST00000492973 LEXMQ3ZCV2 418 aa7.18□□□□□ -1.26
TPR-208ENST00000492973 TDRD12Q587J7 1177 aaKnown RBP7.18□□□□□ -1.26
TPR-208ENST00000492973 PPM1LQ5SGD2 360 aa7.18□□□□□ -1.26
TPR-208ENST00000492973 SDHAF4Q5VUM1 108 aa7.18□□□□□ -1.26
TPR-208ENST00000492973 ARHGAP17Q68EM7 881 aa7.18□□□□□ -1.26
TPR-208ENST00000492973 C4orf50Q6ZRC1 276 aa7.18□□□□□ -1.26
TPR-208ENST00000492973 ARHGEF18Q6ZSZ5 1173 aa7.18□□□□□ -1.26
TPR-208ENST00000492973 RTL10Q7L3V2 364 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms