RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 DNPEPQ9ULA0 475 aa4.29□□□□□ -1.72
BRCA1-220ENST00000492859 COQ6Q9Y2Z9 468 aa4.29□□□□□ -1.72
BRCA1-220ENST00000492859 SH3GLB1Q9Y371 365 aa4.29□□□□□ -1.72
BRCA1-220ENST00000492859 AP4B1Q9Y6B7 739 aa4.29□□□□□ -1.72
BRCA1-220ENST00000492859 CPDO75976 1380 aa4.29□□□□□ -1.72
BRCA1-220ENST00000492859 A0A075B6Q4 140 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 LOC390937A0A1W2PQ73 354 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 MEX3AA1L020 520 aaKnown RBP4.28□□□□□ -1.72
BRCA1-220ENST00000492859 FAM170BA6NMN3 283 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 MYO1FO00160 1098 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 GRM8O00222 908 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 WRBO00258 174 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 PODXLO00592 558 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 BIRC5O15392 142 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 PRPF4O43172 522 aaKnown RBP eCLIP4.28□□□□□ -1.725e-17■■■■■ 29.7
BRCA1-220ENST00000492859 TGFB1I1O43294 461 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 ASNA1O43681 348 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 GATCO43716 136 aaKnown RBP4.28□□□□□ -1.72
BRCA1-220ENST00000492859 DTNBO60941 627 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 ADAM11O75078 769 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 BMP10O95393 424 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 NDST3O95803 873 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 GAS8O95995 478 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 IL6P05231 212 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 EPHX1P07099 455 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 FAM86B2P0C5J1 330 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 NME1P15531 152 aaKnown RBP4.28□□□□□ -1.72
BRCA1-220ENST00000492859 EDNRBP24530 442 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 CDC25AP30304 524 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 CCR10P46092 362 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 AARSP49588 968 aaKnown RBP eCLIP4.28□□□□□ -1.72
BRCA1-220ENST00000492859 DGKEP52429 567 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 SMSP52788 366 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 CRYBB1P53674 252 aaPredicted RBP4.28□□□□□ -1.72
BRCA1-220ENST00000492859 PDE1AP54750 535 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 NAGLUP54802 743 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 PRMT2P55345 433 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 NOMO3P69849 1222 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 INSM1Q01101 510 aaPredicted RBP4.28□□□□□ -1.72
BRCA1-220ENST00000492859 SPIBQ01892 262 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 SLFN5Q08AF3 891 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 FADDQ13158 208 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 SRSF5Q13243 272 aaKnown RBP4.28□□□□□ -1.72
BRCA1-220ENST00000492859 TSTA3Q13630 321 aaPredicted RBP4.28□□□□□ -1.72
BRCA1-220ENST00000492859 GAMTQ14353 236 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 PRSS53Q2L4Q9 553 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 FAM83EQ2M2I3 478 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 PRICKLE4Q2TBC4 344 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 TMEM119Q4V9L6 283 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 PABPC1LQ4VXU2 614 aaKnown RBP4.28□□□□□ -1.72
BRCA1-220ENST00000492859 PLEKHO1Q53GL0 409 aaPredicted RBP4.28□□□□□ -1.72
BRCA1-220ENST00000492859 NOMO2Q5JPE7 1267 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 EFHC2Q5JST6 749 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 AARS2Q5JTZ9 985 aaKnown RBP4.28□□□□□ -1.72
BRCA1-220ENST00000492859 TOR2AQ5JU69 321 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 TEX35Q5T0J7 233 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 OVOS1Q6IE37 1185 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 KLHL17Q6TDP4 642 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 Q6ZVU0 165 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 CAMKMTQ7Z624 323 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 CUZD1Q86UP6 607 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 ZNF677Q86XU0 584 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 CCDC103Q8IW40 242 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 GPR65Q8IYL9 337 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 LIX1Q8N485 282 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 IQUBQ8NA54 791 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 SCAMP5Q8TAC9 235 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 BBS10Q8TAM1 723 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 CYP2W1Q8TAV3 490 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 FANK1Q8TC84 345 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 LKAAEAR1Q8TD35 194 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 ZDHHC1Q8WTX9 485 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 DPF1Q92782 380 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 KAT2AQ92830 837 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 PERPQ96FX8 193 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 ZDHHC12Q96GR4 267 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 APOPT1Q96IL0 206 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 ELMO2Q96JJ3 720 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 PPP1R36Q96LQ0 422 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 FGD4Q96M96 766 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 CDRT15Q96T59 188 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 TUBB6Q9BUF5 446 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 FRMD8Q9BZ67 464 aaPredicted RBP4.28□□□□□ -1.72
BRCA1-220ENST00000492859 TWSG1Q9GZX9 223 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 SLC25A18Q9H1K4 315 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 PABPC3Q9H361 631 aaKnown RBP4.28□□□□□ -1.72
BRCA1-220ENST00000492859 TPK1Q9H3S4 243 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 METTL7AQ9H8H3 244 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 KCNK12Q9HB15 430 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 NOD2Q9HC29 1040 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 TRPC7Q9HCX4 862 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 LZTFL1Q9NQ48 299 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 PFDN4Q9NQP4 134 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 SEC31BQ9NQW1 1179 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 PRDM6Q9NQX0 595 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 BATF3Q9NR55 127 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 FBXO28Q9NVF7 368 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 THAP1Q9NVV9 213 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 P4HTMQ9NXG6 502 aa4.28□□□□□ -1.72
BRCA1-220ENST00000492859 BARHL2Q9NY43 387 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms