RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 BABAM1Q9NWV8 329 aa4.16□□□□□ -1.74
VTA1-204ENST00000491881 TBC1D14Q9P2M4 693 aa4.16□□□□□ -1.74
VTA1-204ENST00000491881 SLC25A10Q9UBX3 287 aaPredicted RBP4.16□□□□□ -1.74
VTA1-204ENST00000491881 PLEKHB1Q9UF11 243 aaPredicted RBP4.16□□□□□ -1.74
VTA1-204ENST00000491881 PCDHA12Q9UN75 941 aa4.16□□□□□ -1.74
VTA1-204ENST00000491881 CAMK2AQ9UQM7 478 aa4.16□□□□□ -1.74
VTA1-204ENST00000491881 PCDHGB5Q9Y5G0 923 aa4.16□□□□□ -1.74
VTA1-204ENST00000491881 A0A096LPK6 155 aa4.15□□□□□ -1.75
VTA1-204ENST00000491881 TEX13CA0A0J9YWL9 993 aa4.15□□□□□ -1.75
VTA1-204ENST00000491881 TMEM272A0A1B0GTI8 110 aa4.15□□□□□ -1.75
VTA1-204ENST00000491881 PABPN1LA6NDY0 278 aaKnown RBP4.15□□□□□ -1.75
VTA1-204ENST00000491881 FAM157AC9JC47 383 aa4.15□□□□□ -1.75
VTA1-204ENST00000491881 MDM4O15151 490 aa4.15□□□□□ -1.75
VTA1-204ENST00000491881 SPTLC2O15270 562 aa4.15□□□□□ -1.75
VTA1-204ENST00000491881 SLC25A17O43808 307 aa4.15□□□□□ -1.75
VTA1-204ENST00000491881 NDUFB8O95169 186 aa4.15□□□□□ -1.75
VTA1-204ENST00000491881 SYF2O95926 243 aaKnown RBP4.15□□□□□ -1.75
VTA1-204ENST00000491881 F9P00740 461 aa4.15□□□□□ -1.75
VTA1-204ENST00000491881 MMP3P08254 477 aa4.15□□□□□ -1.75
VTA1-204ENST00000491881 GPR12P47775 334 aa4.15□□□□□ -1.75
VTA1-204ENST00000491881 UFM1P61960 85 aa4.15□□□□□ -1.75
VTA1-204ENST00000491881 ZNF260Q3ZCT1 412 aa4.15□□□□□ -1.75
VTA1-204ENST00000491881 TMEM81Q6P7N7 255 aa4.15□□□□□ -1.75
VTA1-204ENST00000491881 C17orf99Q6UX52 265 aa4.15□□□□□ -1.75
VTA1-204ENST00000491881 SERPINA11Q86U17 422 aa4.15□□□□□ -1.75
VTA1-204ENST00000491881 FAM160B2Q86V87 743 aa4.15□□□□□ -1.75
VTA1-204ENST00000491881 ZDHHC23Q8IYP9 409 aa4.15□□□□□ -1.75
VTA1-204ENST00000491881 MMP21Q8N119 569 aa4.15□□□□□ -1.75
VTA1-204ENST00000491881 RASSF8Q8NHQ8 419 aa4.15□□□□□ -1.75
VTA1-204ENST00000491881 NFKBIDQ8NI38 313 aa4.15□□□□□ -1.75
VTA1-204ENST00000491881 TMEM174Q8WUU8 243 aa4.15□□□□□ -1.75
VTA1-204ENST00000491881 LPAR1Q92633 364 aa4.15□□□□□ -1.75
VTA1-204ENST00000491881 MSI2Q96DH6 328 aaKnown RBP4.15□□□□□ -1.75
VTA1-204ENST00000491881 HMCESQ96FZ2 354 aa4.15□□□□□ -1.75
VTA1-204ENST00000491881 PDCL3Q9H2J4 239 aa4.15□□□□□ -1.75
VTA1-204ENST00000491881 FZD3Q9NPG1 666 aa4.15□□□□□ -1.75
VTA1-204ENST00000491881 SEMA4BQ9NPR2 832 aaPredicted RBP4.15□□□□□ -1.75
VTA1-204ENST00000491881 SNTG1Q9NSN8 517 aa4.15□□□□□ -1.75
VTA1-204ENST00000491881 KCND2Q9NZV8 630 aa4.15□□□□□ -1.75
VTA1-204ENST00000491881 SEL1LQ9UBV2 794 aa4.15□□□□□ -1.75
VTA1-204ENST00000491881 IGLV5-39A0A0G2JS06 123 aa4.14□□□□□ -1.75
VTA1-204ENST00000491881 GAGE12JA6NER3 117 aa4.14□□□□□ -1.75
VTA1-204ENST00000491881 SOCS2O14508 198 aa4.14□□□□□ -1.75
VTA1-204ENST00000491881 RTN3O95197 1032 aaPredicted RBP4.14□□□□□ -1.75
VTA1-204ENST00000491881 TBX18O95935 607 aa4.14□□□□□ -1.75
VTA1-204ENST00000491881 CD4P01730 458 aa4.14□□□□□ -1.75
VTA1-204ENST00000491881 KLKB1P03952 638 aa4.14□□□□□ -1.75
VTA1-204ENST00000491881 GALTP07902 379 aa4.14□□□□□ -1.75
VTA1-204ENST00000491881 TMEM191BP0C7N4 346 aa4.14□□□□□ -1.75
VTA1-204ENST00000491881 MYZAPP0CAP1 466 aa4.14□□□□□ -1.75
VTA1-204ENST00000491881 COX7A2P14406 83 aa4.14□□□□□ -1.75
VTA1-204ENST00000491881 SLC2A4P14672 509 aa4.14□□□□□ -1.75
VTA1-204ENST00000491881 TNFAIP3P21580 790 aa4.14□□□□□ -1.75
VTA1-204ENST00000491881 FMO4P31512 558 aa4.14□□□□□ -1.75
VTA1-204ENST00000491881 SRSF1Q07955 248 aaKnown RBP eCLIP4.14□□□□□ -1.75
VTA1-204ENST00000491881 NEXNQ0ZGT2 675 aa4.14□□□□□ -1.75
VTA1-204ENST00000491881 LAMB3Q13751 1172 aa4.14□□□□□ -1.75
VTA1-204ENST00000491881 RUNX2Q13950 521 aa4.14□□□□□ -1.75
VTA1-204ENST00000491881 NCAPH2Q6IBW4 605 aa4.14□□□□□ -1.75
VTA1-204ENST00000491881 HEPHL1Q6MZM0 1159 aa4.14□□□□□ -1.75
VTA1-204ENST00000491881 MOB3CQ70IA8 216 aa4.14□□□□□ -1.75
VTA1-204ENST00000491881 R3HCC1LQ7Z5L2 792 aaKnown RBP4.14□□□□□ -1.75
VTA1-204ENST00000491881 TADA2BQ86TJ2 420 aa4.14□□□□□ -1.75
VTA1-204ENST00000491881 TRIM74Q86UV6 250 aa4.14□□□□□ -1.75
VTA1-204ENST00000491881 TRIM73Q86UV7 250 aa4.14□□□□□ -1.75
VTA1-204ENST00000491881 GPSM1Q86YR5 675 aa4.14□□□□□ -1.75
VTA1-204ENST00000491881 TMEM199Q8N511 208 aa4.14□□□□□ -1.75
VTA1-204ENST00000491881 PLD5Q8N7P1 536 aa4.14□□□□□ -1.75
VTA1-204ENST00000491881 C11orf65Q8NCR3 313 aa4.14□□□□□ -1.75
VTA1-204ENST00000491881 ZNF548Q8NEK5 533 aaPredicted RBP4.14□□□□□ -1.75
VTA1-204ENST00000491881 PPHLN1Q8NEY8 458 aaKnown RBP4.14□□□□□ -1.75
VTA1-204ENST00000491881 UCMAQ8WVF2 138 aa4.14□□□□□ -1.75
VTA1-204ENST00000491881 RFFLQ8WZ73 363 aa4.14□□□□□ -1.75
VTA1-204ENST00000491881 SKA1Q96BD8 255 aa4.14□□□□□ -1.75
VTA1-204ENST00000491881 KLHL29Q96CT2 875 aa4.14□□□□□ -1.75
VTA1-204ENST00000491881 TMEM79Q9BSE2 394 aa4.14□□□□□ -1.75
VTA1-204ENST00000491881 LHPPQ9H008 270 aa4.14□□□□□ -1.75
VTA1-204ENST00000491881 FOXP1Q9H334 677 aaPredicted RBP4.14□□□□□ -1.75
VTA1-204ENST00000491881 MAP6D1Q9H9H5 199 aa4.14□□□□□ -1.75
VTA1-204ENST00000491881 POT1Q9NUX5 634 aa4.14□□□□□ -1.75
VTA1-204ENST00000491881 MPP6Q9NZW5 540 aa4.14□□□□□ -1.75
VTA1-204ENST00000491881 SARDHQ9UL12 918 aa4.14□□□□□ -1.75
VTA1-204ENST00000491881 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.13□□□□□ -1.75
VTA1-204ENST00000491881 A0A1W2PPH5 198 aa4.13□□□□□ -1.75
VTA1-204ENST00000491881 TYW5A2RUC4 315 aaKnown RBP4.13□□□□□ -1.75
VTA1-204ENST00000491881 B4E171 279 aa4.13□□□□□ -1.75
VTA1-204ENST00000491881 STMND1H3BQB6 276 aa4.13□□□□□ -1.75
VTA1-204ENST00000491881 HSPB6O14558 160 aa4.13□□□□□ -1.75
VTA1-204ENST00000491881 ATG13O75143 517 aa4.13□□□□□ -1.75
VTA1-204ENST00000491881 TACC1O75410 805 aa4.13□□□□□ -1.75
VTA1-204ENST00000491881 IFNA2P01563 188 aa4.13□□□□□ -1.75
VTA1-204ENST00000491881 ENO3P13929 434 aaPredicted RBP4.13□□□□□ -1.75
VTA1-204ENST00000491881 ABCD1P33897 745 aa4.13□□□□□ -1.75
VTA1-204ENST00000491881 AVPR1AP37288 418 aa4.13□□□□□ -1.75
VTA1-204ENST00000491881 TSPAN7P41732 249 aa4.13□□□□□ -1.75
VTA1-204ENST00000491881 NR4A2P43354 598 aa4.13□□□□□ -1.75
VTA1-204ENST00000491881 HARS2P49590 506 aaKnown RBP4.13□□□□□ -1.75
VTA1-204ENST00000491881 CTCFP49711 727 aaPredicted RBP4.13□□□□□ -1.75
VTA1-204ENST00000491881 CCR9P51686 369 aa4.13□□□□□ -1.75
VTA1-204ENST00000491881 CYP4A11Q02928 519 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms