RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 ERMARDQ5T6L9 678 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 N4BP2L1Q5TBK1 243 aaPredicted RBP7.76□□□□□ -1.17
CLDN1-202ENST00000490800 EGFLAMQ63HQ2 1017 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 KAZNQ674X7 775 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 SDE2Q6IQ49 451 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 MSANTD2Q6P1R3 559 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 ARMCX6Q7L4S7 300 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 TRMT11Q7Z4G4 463 aaKnown RBP7.76□□□□□ -1.17
CLDN1-202ENST00000490800 TADA2BQ86TJ2 420 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 FAM131BQ86XD5 332 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 KLHL7Q8IXQ5 586 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 CHPFQ8IZ52 775 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 ARHGAP18Q8N392 663 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 DEFB119Q8N690 84 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 MAIP1Q8WWC4 291 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 ALKBH8Q96BT7 664 aaKnown RBP7.76□□□□□ -1.17
CLDN1-202ENST00000490800 P2RY11Q96G91 374 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 RHOXF2Q9BQY4 288 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 LRRC1Q9BTT6 524 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 MAGEB5Q9BZ81 275 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 DDX47Q9H0S4 455 aaKnown RBP7.76□□□□□ -1.17
CLDN1-202ENST00000490800 FAM204AQ9H8W3 233 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 ANKZF1Q9H8Y5 726 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 PCDH18Q9HCL0 1135 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.76□□□□□ -1.17
CLDN1-202ENST00000490800 TMEM74BQ9NUR3 256 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 DDIT4Q9NX09 232 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 CLIC5Q9NZA1 410 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 MARK1Q9P0L2 795 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 COX16Q9P0S2 106 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 MBD1Q9UIS9 605 aaPredicted RBP7.76□□□□□ -1.17
CLDN1-202ENST00000490800 RASAL2Q9UJF2 1139 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 FZD10Q9ULW2 581 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 EFR3BQ9Y2G0 817 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 R3HDM2Q9Y2K5 976 aaKnown RBP7.76□□□□□ -1.17
CLDN1-202ENST00000490800 SPTBN2O15020 2390 aa7.76□□□□□ -1.17
CLDN1-202ENST00000490800 RALGAPA1Q6GYQ0 2036 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 A0A1W2PQF6 199 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 LNP1A1A4G5 178 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 I6L893 689 aaPredicted RBP7.75□□□□□ -1.17
CLDN1-202ENST00000490800 DYNC1I1O14576 645 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 IRAK2O43187 625 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 EFSO43281 561 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 RAD51CO43502 376 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 BNIP3LO60238 219 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 TJP3O95049 919 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 KCNK5O95279 499 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 F9P00740 461 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 HOXB2P14652 356 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 GABRG2P18507 467 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 CD33P20138 364 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 L1CAMP32004 1257 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 ADRA1BP35368 520 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 COILP38432 576 aaPredicted RBP7.75□□□□□ -1.17
CLDN1-202ENST00000490800 PTGER3P43115 390 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 SCAPQ12770 1279 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 BYSLQ13895 437 aaKnown RBP7.75□□□□□ -1.17
CLDN1-202ENST00000490800 UBAP2LQ14157 1087 aaKnown RBP7.75□□□□□ -1.17
CLDN1-202ENST00000490800 DPYSL2Q16555 572 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 GLE1Q53GS7 698 aaKnown RBP7.75□□□□□ -1.17
CLDN1-202ENST00000490800 ODF2Q5BJF6 829 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 KIAA1211LQ6NV74 962 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 TTC27Q6P3X3 843 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 BBS12Q6ZW61 710 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 LPCAT2Q7L5N7 544 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 VSIG1Q86XK7 387 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 PSTKQ8IV42 348 aaKnown RBP7.75□□□□□ -1.17
CLDN1-202ENST00000490800 DENND1CQ8IV53 801 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 RNF139Q8WU17 664 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 C1orf54Q8WWF1 131 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 MAGOHBQ96A72 148 aaKnown RBP7.75□□□□□ -1.17
CLDN1-202ENST00000490800 NTAN1Q96AB6 310 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 FAF2Q96CS3 445 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 CDK5RAP1Q96SZ6 601 aaKnown RBP7.75□□□□□ -1.17
CLDN1-202ENST00000490800 EDEM2Q9BV94 578 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 PARD6BQ9BYG5 372 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 DCLK3Q9C098 648 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 DHX35Q9H5Z1 703 aaKnown RBP7.75□□□□□ -1.17
CLDN1-202ENST00000490800 LRRC19Q9H756 370 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 ANLNQ9NQW6 1124 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.75□□□□□ -1.17
CLDN1-202ENST00000490800 CACNA2D2Q9NY47 1150 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 SFMBT1Q9UHJ3 866 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 FOXD3Q9UJU5 478 aaPredicted RBP7.75□□□□□ -1.17
CLDN1-202ENST00000490800 FBXO10Q9UK96 956 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 AGO1Q9UL18 857 aaKnown RBP7.75□□□□□ -1.17
CLDN1-202ENST00000490800 AP4E1Q9UPM8 1137 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 ZNF510Q9Y2H8 683 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 RAD54BQ9Y620 910 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 HELZP42694 1942 aaKnown RBP7.75□□□□□ -1.17
CLDN1-202ENST00000490800 ABCA7Q8IZY2 2146 aa7.75□□□□□ -1.17
CLDN1-202ENST00000490800 EML5Q05BV3 1969 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 SLC12A8A0AV02 714 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 TARSL2A2RTX5 802 aaKnown RBP7.74□□□□□ -1.17
CLDN1-202ENST00000490800 ZNF487B1APH4 448 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 CDX4O14627 284 aaPredicted RBP7.74□□□□□ -1.17
CLDN1-202ENST00000490800 MSI1O43347 362 aaKnown RBP7.74□□□□□ -1.17
CLDN1-202ENST00000490800 CST8O60676 142 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 ITPKAP23677 461 aa7.74□□□□□ -1.17
CLDN1-202ENST00000490800 CORO1AP31146 461 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms