RNA–Protein interactions for RNA: ENST00000490723.1

PHC3-212, Transcript of polyhomeotic homolog 3, human

TSL 2

Gene PHC3, Length 264 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHC3-212	ENST00000490723	SELENON	Q9NZV5	590 aa		4.44	□□□□□ -1.7
PHC3-212	ENST00000490723	IL36RN	Q9UBH0	155 aa		4.44	□□□□□ -1.7
PHC3-212	ENST00000490723	CNPY2	Q9Y2B0	182 aa		4.44	□□□□□ -1.7
PHC3-212	ENST00000490723	GDA	Q9Y2T3	454 aa		4.44	□□□□□ -1.7
PHC3-212	ENST00000490723	PCDHGB3	Q9Y5G1	929 aa		4.44	□□□□□ -1.7
PHC3-212	ENST00000490723	KLK10	O43240	276 aa		4.43	□□□□□ -1.7
PHC3-212	ENST00000490723	PIP5K1C	O60331	668 aa		4.43	□□□□□ -1.7
PHC3-212	ENST00000490723	GLUD1	P00367	558 aa		4.43	□□□□□ -1.7
PHC3-212	ENST00000490723	ADA	P00813	363 aa		4.43	□□□□□ -1.7
PHC3-212	ENST00000490723	SERPINC1	P01008	464 aa		4.43	□□□□□ -1.7
PHC3-212	ENST00000490723	GLUD2	P49448	558 aa		4.43	□□□□□ -1.7
PHC3-212	ENST00000490723	ARSF	P54793	590 aa		4.43	□□□□□ -1.7
PHC3-212	ENST00000490723	SLC12A1	Q13621	1099 aa		4.43	□□□□□ -1.7
PHC3-212	ENST00000490723	CAPS	Q13938	189 aa		4.43	□□□□□ -1.7
PHC3-212	ENST00000490723	ANKRD1	Q15327	319 aa		4.43	□□□□□ -1.7
PHC3-212	ENST00000490723	SLC18A3	Q16572	532 aa		4.43	□□□□□ -1.7
PHC3-212	ENST00000490723	TDRD12	Q587J7	1177 aa	Known RBP	4.43	□□□□□ -1.7
PHC3-212	ENST00000490723	NADSYN1	Q6IA69	706 aa		4.43	□□□□□ -1.7
PHC3-212	ENST00000490723	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	4.43	□□□□□ -1.7
PHC3-212	ENST00000490723	RBFA	Q8N0V3	343 aa		4.43	□□□□□ -1.7
PHC3-212	ENST00000490723	TMEM163	Q8TC26	289 aa		4.43	□□□□□ -1.7
PHC3-212	ENST00000490723	GPT2	Q8TD30	523 aa		4.43	□□□□□ -1.7
PHC3-212	ENST00000490723	MVB12B	Q9H7P6	319 aa		4.43	□□□□□ -1.7
PHC3-212	ENST00000490723	ENTPD7	Q9NQZ7	604 aa		4.43	□□□□□ -1.7
PHC3-212	ENST00000490723	RASSF1	Q9NS23	344 aa		4.43	□□□□□ -1.7
PHC3-212	ENST00000490723	VWA3A	A6NCI4	1184 aa		4.42	□□□□□ -1.7
PHC3-212	ENST00000490723	CNP	P09543	421 aa	Known RBP	4.42	□□□□□ -1.7
PHC3-212	ENST00000490723	ITGB8	P26012	769 aa		4.42	□□□□□ -1.7
PHC3-212	ENST00000490723	AMT	P48728	403 aa		4.42	□□□□□ -1.7
PHC3-212	ENST00000490723	PDLIM4	P50479	330 aa		4.42	□□□□□ -1.7
PHC3-212	ENST00000490723	KRTAP10-9	P60411	292 aa		4.42	□□□□□ -1.7
PHC3-212	ENST00000490723	PLCB4	Q15147	1175 aa		4.42	□□□□□ -1.7
PHC3-212	ENST00000490723	FBXO47	Q5MNV8	452 aa		4.42	□□□□□ -1.7
PHC3-212	ENST00000490723	NCAPH2	Q6IBW4	605 aa		4.42	□□□□□ -1.7
PHC3-212	ENST00000490723	CAPRIN2	Q6IMN6	1127 aa	Known RBP	4.42	□□□□□ -1.7
PHC3-212	ENST00000490723	LDHAL6A	Q6ZMR3	332 aa		4.42	□□□□□ -1.7
PHC3-212	ENST00000490723	CHD1L	Q86WJ1	897 aa		4.42	□□□□□ -1.7
PHC3-212	ENST00000490723	PYM1	Q9BRP8	204 aa	Known RBP	4.42	□□□□□ -1.7
PHC3-212	ENST00000490723	HERPUD2	Q9BSE4	406 aa		4.42	□□□□□ -1.7
PHC3-212	ENST00000490723	TM6SF1	Q9BZW5	370 aa		4.42	□□□□□ -1.7
PHC3-212	ENST00000490723	CDT1	Q9H211	546 aa		4.42	□□□□□ -1.7
PHC3-212	ENST00000490723	MROH8	Q9H579	483 aa		4.42	□□□□□ -1.7
PHC3-212	ENST00000490723	SLC32A1	Q9H598	525 aa		4.42	□□□□□ -1.7
PHC3-212	ENST00000490723	CLDN16	Q9Y5I7	305 aa		4.42	□□□□□ -1.7
PHC3-212	ENST00000490723	SH2D7	A6NKC9	451 aa	Predicted RBP	4.41	□□□□□ -1.7
PHC3-212	ENST00000490723	CHL1	O00533	1208 aa		4.41	□□□□□ -1.7
PHC3-212	ENST00000490723	SOX30	O94993	753 aa		4.41	□□□□□ -1.7
PHC3-212	ENST00000490723	FGF3	P11487	239 aa	Predicted RBP	4.41	□□□□□ -1.7
PHC3-212	ENST00000490723	SLC18A2	Q05940	514 aa		4.41	□□□□□ -1.7
PHC3-212	ENST00000490723	KEAP1	Q14145	624 aa		4.41	□□□□□ -1.7
PHC3-212	ENST00000490723	CTTN	Q14247	550 aa	Known RBP	4.41	□□□□□ -1.7
PHC3-212	ENST00000490723	NAA25	Q14CX7	972 aa		4.41	□□□□□ -1.7
PHC3-212	ENST00000490723	SHB	Q15464	509 aa		4.41	□□□□□ -1.7
PHC3-212	ENST00000490723	IL20RB	Q6UXL0	311 aa		4.41	□□□□□ -1.7
PHC3-212	ENST00000490723	ANKRD42	Q8N9B4	389 aa		4.41	□□□□□ -1.7
PHC3-212	ENST00000490723	GDPD5	Q8WTR4	605 aa		4.41	□□□□□ -1.7
PHC3-212	ENST00000490723	TMED6	Q8WW62	240 aa		4.41	□□□□□ -1.7
PHC3-212	ENST00000490723	CNOT9	Q92600	299 aa	Known RBP	4.41	□□□□□ -1.7
PHC3-212	ENST00000490723	ZSCAN31	Q96LW9	406 aa	Predicted RBP	4.41	□□□□□ -1.7
PHC3-212	ENST00000490723	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	4.41	□□□□□ -1.7
PHC3-212	ENST00000490723	LMAN2L	Q9H0V9	348 aa		4.41	□□□□□ -1.7
PHC3-212	ENST00000490723	ALKBH4	Q9NXW9	302 aa		4.41	□□□□□ -1.7
PHC3-212	ENST00000490723	LINC01553	A4QN01	128 aa		4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	CLEC18A	A5D8T8	446 aa		4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	IFRD1	O00458	451 aa	Predicted RBP	4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	ACOT8	O14734	319 aa		4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	PER2	O15055	1255 aa		4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	CEP104	O60308	925 aa		4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	KCNJ13	O60928	360 aa		4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	CHRM4	P08173	479 aa		4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	CTPS1	P17812	591 aa		4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	DCTD	P32321	178 aa		4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	CLCN5	P51795	746 aa		4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	TRAF2	Q12933	501 aa		4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	TRAF3	Q13114	568 aa		4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	LPIN1	Q14693	890 aa		4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	HLF	Q16534	295 aa		4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	IZUMO4	Q1ZYL8	232 aa		4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	TYW3	Q6IPR3	259 aa	Known RBP	4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	C8orf82	Q6P1X6	216 aa	Predicted RBP	4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	PATL1	Q86TB9	770 aa	Known RBP	4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	MON1A	Q86VX9	555 aa		4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	LURAP1L	Q8IV03	231 aa		4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	DCP1B	Q8IZD4	617 aa	Known RBP	4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	CLIP4	Q8N3C7	705 aa		4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	RBMXL3	Q8N7X1	1067 aa	Known RBP	4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	USP38	Q8NB14	1042 aa		4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	NEXN-AS1	Q8NBZ9	246 aa		4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	CLEC18C	Q8NCF0	446 aa		4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	LMO3	Q8TAP4	145 aa		4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	SH3KBP1	Q96B97	665 aa		4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	RNF183	Q96D59	192 aa		4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	TXNDC15	Q96J42	360 aa		4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	TWNK	Q96RR1	684 aa		4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	YME1L1	Q96TA2	773 aa		4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	CLSTN3	Q9BQT9	956 aa		4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	ISCA1	Q9BUE6	129 aa		4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	MSTO1	Q9BUK6	570 aa		4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	C6orf106	Q9H6K1	298 aa	Predicted RBP	4.4	□□□□□ -1.71
PHC3-212	ENST00000490723	CD93	Q9NPY3	652 aa		4.4	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms