RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 NELL1Q92832 810 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 CPB2Q96IY4 423 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 DHX33Q9H6R0 707 aaKnown RBP8.94□□□□□ -0.98
LSAMP-205ENST00000490035 DNAJC18Q9H819 358 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 PNMA8BQ9ULN7 279 aaPredicted RBP8.94□□□□□ -0.98
LSAMP-205ENST00000490035 C2CD2LO14523 706 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 PCDH8O95206 1070 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 TCF4P15884 667 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 BIKQ13323 160 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 ACOX1Q15067 660 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 IL27RAQ6UWB1 636 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 MPP4Q96JB8 637 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 LHX5Q9H2C1 402 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 POMKQ9H5K3 350 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 HMGXB4Q9UGU5 601 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 PCDHGA4Q9Y5G9 962 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 UBR1Q8IWV7 1749 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 C1QTNF3-AMACRE9PGA6 284 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 H3BNH8 94 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 RARAP10276 462 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 UMPSP11172 480 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 BMP7P18075 431 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 TPP2P29144 1249 aaPredicted RBP8.94□□□□□ -0.98
LSAMP-205ENST00000490035 MARSP56192 900 aaKnown RBP8.94□□□□□ -0.98
LSAMP-205ENST00000490035 RAB10P61026 200 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 CSNK2BP67870 215 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 PRKG2Q13237 762 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 MFSD10Q14728 455 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 PSMD5Q16401 504 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 EPC2Q52LR7 807 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 CSGALNACT1Q8TDX6 532 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 CIPCQ9C0C6 399 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 FHDC1Q9C0D6 1143 aaPredicted RBP8.94□□□□□ -0.98
LSAMP-205ENST00000490035 HPS4Q9NQG7 708 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 MPZL2O60487 215 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 BMT2Q1RMZ1 405 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 DGKKQ5KSL6 1271 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 USP50Q70EL3 339 aaPredicted RBP8.94□□□□□ -0.98
LSAMP-205ENST00000490035 CXXC5Q7LFL8 322 aaKnown RBP8.94□□□□□ -0.98
LSAMP-205ENST00000490035 REM2Q8IYK8 340 aaPredicted RBP8.94□□□□□ -0.98
LSAMP-205ENST00000490035 TBC1D21Q8IYX1 336 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 SFRP1Q8N474 314 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 ZNF614Q8N883 585 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 AHCYL2Q96HN2 611 aaKnown RBP8.94□□□□□ -0.98
LSAMP-205ENST00000490035 MLPHQ9BV36 600 aaPredicted RBP8.94□□□□□ -0.98
LSAMP-205ENST00000490035 VPS45Q9NRW7 570 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 GMIPQ9P107 970 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 SAMD4AQ9UPU9 718 aaKnown RBP8.94□□□□□ -0.98
LSAMP-205ENST00000490035 ZBTB12Q9Y330 459 aaPredicted RBP8.94□□□□□ -0.98
LSAMP-205ENST00000490035 KNDC1Q76NI1 1749 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 AVILO75366 819 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 ENO2P09104 434 aaPredicted RBP8.94□□□□□ -0.98
LSAMP-205ENST00000490035 UGT1A5P35504 534 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 ASMTP46597 345 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 ACLYP53396 1101 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 RAB2AP61019 212 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 SLC15A2Q16348 729 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 SMYD5Q6GMV2 418 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 SLC35C1Q96A29 364 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 C6orf62Q9GZU0 229 aaPredicted RBP8.94□□□□□ -0.98
LSAMP-205ENST00000490035 TKTL2Q9H0I9 626 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 PSMG1O95456 288 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 RAG1P15918 1043 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 TNNI3P19429 210 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 ITPK1Q13572 414 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 EMC1Q8N766 993 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 CDRT15Q96T59 188 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 POLR1BQ9H9Y6 1135 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 SNTG2Q9NY99 539 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 DMGDHQ9UI17 866 aaKnown RBP8.94□□□□□ -0.98
LSAMP-205ENST00000490035 LRRC14BA6NHZ5 514 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 PECAM1P16284 738 aaPredicted RBP8.94□□□□□ -0.98
LSAMP-205ENST00000490035 ALDH9A1P49189 494 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 ZNF621Q6ZSS3 439 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 CCDC80Q76M96 950 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 SLC30A8Q8IWU4 369 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 KIFC1Q9BW19 673 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 MARCH2Q9P0N8 246 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 RAPGEFL1Q9UHV5 662 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 MAGEL2Q9UJ55 1249 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 PCDHB1Q9Y5F3 818 aa8.94□□□□□ -0.98
LSAMP-205ENST00000490035 CCDC182A6NF36 153 aa8.93□□□□□ -0.98
LSAMP-205ENST00000490035 OR6B1O95007 311 aa8.93□□□□□ -0.98
LSAMP-205ENST00000490035 ITGB3BPQ13352 177 aaPredicted RBP8.93□□□□□ -0.98
LSAMP-205ENST00000490035 NR1D2Q14995 579 aa8.93□□□□□ -0.98
LSAMP-205ENST00000490035 ERICH5Q6P6B1 374 aa8.93□□□□□ -0.98
LSAMP-205ENST00000490035 DNAJB8Q8NHS0 232 aa8.93□□□□□ -0.98
LSAMP-205ENST00000490035 PAIP1Q9H074 479 aaKnown RBP8.93□□□□□ -0.98
LSAMP-205ENST00000490035 LRMDAQ9H2I8 198 aa8.93□□□□□ -0.98
LSAMP-205ENST00000490035 KCNMB3Q9NPA1 279 aa8.93□□□□□ -0.98
LSAMP-205ENST00000490035 TUBA8Q9NY65 449 aaPredicted RBP8.93□□□□□ -0.98
LSAMP-205ENST00000490035 TRPS1Q9UHF7 1281 aa8.93□□□□□ -0.98
LSAMP-205ENST00000490035 DCXO43602 365 aa8.93□□□□□ -0.98
LSAMP-205ENST00000490035 VAPBO95292 243 aa8.93□□□□□ -0.98
LSAMP-205ENST00000490035 MYCP01106 439 aaPredicted RBP8.93□□□□□ -0.98
LSAMP-205ENST00000490035 RGS1Q08116 209 aa8.93□□□□□ -0.98
LSAMP-205ENST00000490035 FSCN1Q16658 493 aaKnown RBP8.93□□□□□ -0.98
LSAMP-205ENST00000490035 SH3RF1Q7Z6J0 888 aa8.93□□□□□ -0.98
LSAMP-205ENST00000490035 RBFAQ8N0V3 343 aa8.93□□□□□ -0.98
LSAMP-205ENST00000490035 ANKRD52Q8NB46 1076 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms