RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 SH3GL2Q99962 352 aa21.95■■□□□ 1.11
SMC4-221ENST00000489573 MED4Q9NPJ6 270 aa21.95■■□□□ 1.11
SMC4-221ENST00000489573 BFARQ9NZS9 450 aa21.95■■□□□ 1.11
SMC4-221ENST00000489573 ZC3H7BQ9UGR2 993 aaKnown RBP21.95■■□□□ 1.11
SMC4-221ENST00000489573 TTC24A2A3L6 582 aaPredicted RBP21.95■■□□□ 1.1
SMC4-221ENST00000489573 SPAG6O75602 509 aa21.95■■□□□ 1.1
SMC4-221ENST00000489573 ARSAP15289 507 aa21.95■■□□□ 1.1
SMC4-221ENST00000489573 SSTR1P30872 391 aa21.95■■□□□ 1.1
SMC4-221ENST00000489573 DMC1Q14565 340 aa21.95■■□□□ 1.1
SMC4-221ENST00000489573 PDGFRLQ15198 375 aa21.95■■□□□ 1.1
SMC4-221ENST00000489573 SLC14A2Q15849 920 aa21.95■■□□□ 1.1
SMC4-221ENST00000489573 PCSK7Q16549 785 aa21.95■■□□□ 1.1
SMC4-221ENST00000489573 FUT11Q495W5 492 aa21.95■■□□□ 1.1
SMC4-221ENST00000489573 VITQ6UXI7 678 aa21.95■■□□□ 1.1
SMC4-221ENST00000489573 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.95■■□□□ 1.1
SMC4-221ENST00000489573 ATP2A3Q93084 1043 aa21.95■■□□□ 1.1
SMC4-221ENST00000489573 GAS2L1Q99501 681 aaPredicted RBP21.95■■□□□ 1.1
SMC4-221ENST00000489573 POMKQ9H5K3 350 aa21.95■■□□□ 1.1
SMC4-221ENST00000489573 GOLGA6L10A6NI86 522 aa21.94■■□□□ 1.1
SMC4-221ENST00000489573 SYF2O95926 243 aaKnown RBP21.94■■□□□ 1.1
SMC4-221ENST00000489573 AGTP01019 485 aa21.94■■□□□ 1.1
SMC4-221ENST00000489573 CR2P20023 1033 aa21.94■■□□□ 1.1
SMC4-221ENST00000489573 CES1P23141 567 aa21.94■■□□□ 1.1
SMC4-221ENST00000489573 RGRP47804 291 aa21.94■■□□□ 1.1
SMC4-221ENST00000489573 NPY2RP49146 381 aa21.94■■□□□ 1.1
SMC4-221ENST00000489573 SERPINH1P50454 418 aaKnown RBP21.94■■□□□ 1.1
SMC4-221ENST00000489573 STAT4Q14765 748 aa21.94■■□□□ 1.1
SMC4-221ENST00000489573 KRT71Q3SY84 523 aa21.94■■□□□ 1.1
SMC4-221ENST00000489573 CASC4Q6P4E1 433 aa21.94■■□□□ 1.1
SMC4-221ENST00000489573 C3orf62Q6ZUJ4 267 aa21.94■■□□□ 1.1
SMC4-221ENST00000489573 METTL3Q86U44 580 aaKnown RBP21.94■■□□□ 1.1
SMC4-221ENST00000489573 SMRP1Q8NCR6 262 aa21.94■■□□□ 1.1
SMC4-221ENST00000489573 ST13P5Q8NFI4 369 aaPredicted RBP21.94■■□□□ 1.1
SMC4-221ENST00000489573 ZFYVE19Q96K21 471 aa21.94■■□□□ 1.1
SMC4-221ENST00000489573 NECTIN4Q96NY8 510 aa21.94■■□□□ 1.1
SMC4-221ENST00000489573 XPO6Q96QU8 1125 aaKnown RBP21.94■■□□□ 1.1
SMC4-221ENST00000489573 FAM83CQ9BQN1 747 aa21.94■■□□□ 1.1
SMC4-221ENST00000489573 CCDC77Q9BR77 488 aa21.94■■□□□ 1.1
SMC4-221ENST00000489573 TMEM109Q9BVC6 243 aa21.94■■□□□ 1.1
SMC4-221ENST00000489573 EBF3Q9H4W6 596 aa21.94■■□□□ 1.1
SMC4-221ENST00000489573 SYBUQ9NX95 663 aa21.94■■□□□ 1.1
SMC4-221ENST00000489573 LHX3Q9UBR4 397 aa21.94■■□□□ 1.1
SMC4-221ENST00000489573 DENND4AQ7Z401 1863 aa21.93■■□□□ 1.1
SMC4-221ENST00000489573 GJB3O75712 270 aa21.93■■□□□ 1.1
SMC4-221ENST00000489573 SERPINF2P08697 491 aa21.93■■□□□ 1.1
SMC4-221ENST00000489573 GSTA2P09210 222 aa21.93■■□□□ 1.1
SMC4-221ENST00000489573 LAMP2P13473 410 aa21.93■■□□□ 1.1
SMC4-221ENST00000489573 RHOAP61586 193 aa21.93■■□□□ 1.1
SMC4-221ENST00000489573 SLC20A2Q08357 652 aa21.93■■□□□ 1.1
SMC4-221ENST00000489573 IHHQ14623 411 aa21.93■■□□□ 1.1
SMC4-221ENST00000489573 RANBP10Q6VN20 620 aa21.93■■□□□ 1.1
SMC4-221ENST00000489573 CROCCP2Q86T23 111 aa21.93■■□□□ 1.1
SMC4-221ENST00000489573 CCNJLQ8IV13 435 aa21.93■■□□□ 1.1
SMC4-221ENST00000489573 MFSD6LQ8IWD5 586 aa21.93■■□□□ 1.1
SMC4-221ENST00000489573 NAT16Q8N8M0 369 aa21.93■■□□□ 1.1
SMC4-221ENST00000489573 EXOC2Q96KP1 924 aa21.93■■□□□ 1.1
SMC4-221ENST00000489573 NUDCD1Q96RS6 583 aa21.93■■□□□ 1.1
SMC4-221ENST00000489573 NAT9Q9BTE0 207 aa21.93■■□□□ 1.1
SMC4-221ENST00000489573 SCUBE2Q9NQ36 999 aa21.93■■□□□ 1.1
SMC4-221ENST00000489573 FBXO10Q9UK96 956 aa21.93■■□□□ 1.1
SMC4-221ENST00000489573 FCF1Q9Y324 198 aaKnown RBP21.93■■□□□ 1.1
SMC4-221ENST00000489573 KIF26AQ9ULI4 1882 aaPredicted RBP21.93■■□□□ 1.1
SMC4-221ENST00000489573 CDH23Q9H251 3354 aa21.92■■□□□ 1.1
SMC4-221ENST00000489573 H3BQF6 201 aa21.92■■□□□ 1.1
SMC4-221ENST00000489573 INSIG1O15503 277 aa21.92■■□□□ 1.1
SMC4-221ENST00000489573 MT-CO1P00395 513 aa21.92■■□□□ 1.1
SMC4-221ENST00000489573 IVLP07476 585 aa21.92■■□□□ 1.1
SMC4-221ENST00000489573 MYZAPP0CAP1 466 aa21.92■■□□□ 1.1
SMC4-221ENST00000489573 PGAM1P18669 254 aa21.92■■□□□ 1.1
SMC4-221ENST00000489573 CRADDP78560 199 aa21.92■■□□□ 1.1
SMC4-221ENST00000489573 SULT2A1Q06520 285 aa21.92■■□□□ 1.1
SMC4-221ENST00000489573 FCHO2Q0JRZ9 810 aa21.92■■□□□ 1.1
SMC4-221ENST00000489573 DENND5AQ6IQ26 1287 aa21.92■■□□□ 1.1
SMC4-221ENST00000489573 KIAA0907Q7Z7F0 614 aaPredicted RBP21.92■■□□□ 1.1
SMC4-221ENST00000489573 AHI1Q8N157 1196 aa21.92■■□□□ 1.1
SMC4-221ENST00000489573 ELSPBP1Q96BH3 223 aa21.92■■□□□ 1.1
SMC4-221ENST00000489573 FAM161BQ96MY7 647 aa21.92■■□□□ 1.1
SMC4-221ENST00000489573 ROPN1BQ9BZX4 212 aaPredicted RBP21.92■■□□□ 1.1
SMC4-221ENST00000489573 IL22Q9GZX6 179 aa21.92■■□□□ 1.1
SMC4-221ENST00000489573 ROPN1Q9HAT0 212 aaPredicted RBP21.92■■□□□ 1.1
SMC4-221ENST00000489573 NOD2Q9HC29 1040 aa21.92■■□□□ 1.1
SMC4-221ENST00000489573 SAMD15Q9P1V8 674 aa21.92■■□□□ 1.1
SMC4-221ENST00000489573 CD207Q9UJ71 328 aa21.92■■□□□ 1.1
SMC4-221ENST00000489573 COL6A3P12111 3177 aa21.91■■□□□ 1.1
SMC4-221ENST00000489573 SCNN1BP51168 640 aa21.91■■□□□ 1.1
SMC4-221ENST00000489573 NSUN2Q08J23 767 aaKnown RBP eCLIP21.91■■□□□ 1.1
SMC4-221ENST00000489573 STEAP4Q687X5 459 aa21.91■■□□□ 1.1
SMC4-221ENST00000489573 UNC5AQ6ZN44 842 aa21.91■■□□□ 1.1
SMC4-221ENST00000489573 YAF2Q8IY57 180 aa21.91■■□□□ 1.1
SMC4-221ENST00000489573 EPS8L3Q8TE67 593 aaKnown RBP21.91■■□□□ 1.1
SMC4-221ENST00000489573 FBF1Q8TES7 1133 aa21.91■■□□□ 1.1
SMC4-221ENST00000489573 FEM1CQ96JP0 617 aa21.91■■□□□ 1.1
SMC4-221ENST00000489573 PKNOX2Q96KN3 472 aa21.91■■□□□ 1.1
SMC4-221ENST00000489573 ARNT2Q9HBZ2 717 aa21.91■■□□□ 1.1
SMC4-221ENST00000489573 TMBIM4Q9HC24 238 aa21.91■■□□□ 1.1
SMC4-221ENST00000489573 SLC25A13Q9UJS0 675 aa21.91■■□□□ 1.1
SMC4-221ENST00000489573 DOCK8Q8NF50 2099 aa21.91■■□□□ 1.1
SMC4-221ENST00000489573 MYOFQ9NZM1 2061 aa21.91■■□□□ 1.1
SMC4-221ENST00000489573 K7ERQ8 282 aa21.91■■□□□ 1.1
SMC4-221ENST00000489573 RASGRF2O14827 1237 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms