RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 COL19A1Q14993 1142 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 CYTH1Q15438 398 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 KLHL38Q2WGJ6 581 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 UBAP2Q5T6F2 1119 aaKnown RBP10.15□□□□□ -0.78
USP11-211ENST00000489111 TANGO2Q6ICL3 276 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 KDELC1Q6UW63 502 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 C3orf62Q6ZUJ4 267 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 MTSS1LQ765P7 747 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 KDELC2Q7Z4H8 507 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 PRPF39Q86UA1 669 aaKnown RBP10.15□□□□□ -0.78
USP11-211ENST00000489111 IGDCC3Q8IVU1 814 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 KRT222Q8N1A0 295 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.15□□□□□ -0.78
USP11-211ENST00000489111 NAT16Q8N8M0 369 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 SMRP1Q8NCR6 262 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 PPHLN1Q8NEY8 458 aaKnown RBP10.15□□□□□ -0.78
USP11-211ENST00000489111 ARRDC2Q8TBH0 407 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 WFIKKN2Q8TEU8 576 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 ASIC4Q96FT7 647 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 FEM1CQ96JP0 617 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 ZFYVE19Q96K21 471 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 MSLNLQ96KJ4 702 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 EXOC2Q96KP1 924 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 MRGPRX2Q96LB1 330 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 NUDCD1Q96RS6 583 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 KXD1Q9BQD3 176 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 WDR83Q9BRX9 315 aaKnown RBP10.15□□□□□ -0.78
USP11-211ENST00000489111 EBF3Q9H4W6 596 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 POMKQ9H5K3 350 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 PPCSQ9HAB8 311 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 LRRC4CQ9HCJ2 640 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 SYBUQ9NX95 663 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 LHX3Q9UBR4 397 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 FCF1Q9Y324 198 aaKnown RBP10.15□□□□□ -0.78
USP11-211ENST00000489111 USP15Q9Y4E8 981 aaPredicted RBP10.15□□□□□ -0.78
USP11-211ENST00000489111 ACTL7AQ9Y615 435 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 NFS1Q9Y697 457 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 TLDC2A0PJX2 215 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 TTC24A2A3L6 582 aaPredicted RBP10.14□□□□□ -0.79
USP11-211ENST00000489111 AGPSO00116 658 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 RASGRF2O14827 1237 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 ECI2O75521 394 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 IGSF6O95976 241 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 POLBP06746 335 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 MMP2P08253 660 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 PSMC3P17980 439 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 POLR2EP19388 210 aaKnown RBP10.14□□□□□ -0.79
USP11-211ENST00000489111 HLA-DPA1P20036 260 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 SSTR1P30872 391 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 ADRA1AP35348 466 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 LTBRP36941 435 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 SLCO1A2P46721 670 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 GPX6P59796 221 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 AP1S1P61966 158 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 CRADDP78560 199 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 ECT2LQ008S8 904 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 CDK18Q07002 472 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 FCHO2Q0JRZ9 810 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 SEPT6Q14141 434 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 GRM2Q14416 872 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 SKIV2LQ15477 1246 aaKnown RBP10.14□□□□□ -0.79
USP11-211ENST00000489111 RALGPS1Q5JS13 557 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 MBLAC2Q68D91 279 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 GRAMD4Q6IC98 578 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 VITQ6UXI7 678 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 RNF135Q8IUD6 432 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 MFSD6LQ8IWD5 586 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 AGGF1Q8N302 714 aaeCLIP10.14□□□□□ -0.79
USP11-211ENST00000489111 MPP5Q8N3R9 675 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 RYBPQ8N488 228 aaPredicted RBP10.14□□□□□ -0.79
USP11-211ENST00000489111 SLC25A41Q8N5S1 370 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 PAF1Q8N7H5 531 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 ST13P5Q8NFI4 369 aaPredicted RBP10.14□□□□□ -0.79
USP11-211ENST00000489111 GSDMBQ8TAX9 411 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 EPS8L3Q8TE67 593 aaKnown RBP10.14□□□□□ -0.79
USP11-211ENST00000489111 FBF1Q8TES7 1133 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 ELSPBP1Q96BH3 223 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 TADA1Q96BN2 335 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 LMLNQ96KR4 655 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 SIGLEC10Q96LC7 697 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 CYTH2Q99418 400 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 SH3GL2Q99962 352 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 TMEM109Q9BVC6 243 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 TM6SF2Q9BZW4 377 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 ROPN1BQ9BZX4 212 aaPredicted RBP10.14□□□□□ -0.79
USP11-211ENST00000489111 CIPCQ9C0C6 399 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 STMN4Q9H169 189 aaPredicted RBP10.14□□□□□ -0.79
USP11-211ENST00000489111 ACSS3Q9H6R3 686 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 ROPN1Q9HAT0 212 aaPredicted RBP10.14□□□□□ -0.79
USP11-211ENST00000489111 NOD2Q9HC29 1040 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 INTS6Q9UL03 887 aaKnown RBP10.14□□□□□ -0.79
USP11-211ENST00000489111 TRANK1O15050 2925 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 OBSL1O75147 1896 aa10.14□□□□□ -0.79
USP11-211ENST00000489111 TCRBV9S1A1TA0A576 114 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 MAGEB16A2A368 324 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 H3BQ06 376 aaPredicted RBP10.13□□□□□ -0.79
USP11-211ENST00000489111 H3BQF6 201 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 K7ERQ8 282 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 SOX1O00570 391 aaPredicted RBP10.13□□□□□ -0.79
USP11-211ENST00000489111 RGS16O15492 202 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms