RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 DEFB133Q30KQ1 61 aa16.17■□□□□ 0.18
ERGIC3-217ENST00000488935 LRRC69Q6ZNQ3 347 aa16.17■□□□□ 0.18
ERGIC3-217ENST00000488935 NYAP1Q6ZVC0 841 aa16.17■□□□□ 0.18
ERGIC3-217ENST00000488935 ZNF354CQ86Y25 554 aa16.17■□□□□ 0.18
ERGIC3-217ENST00000488935 RBFAQ8N0V3 343 aa16.17■□□□□ 0.18
ERGIC3-217ENST00000488935 PCDH20Q8N6Y1 951 aaKnown RBP16.17■□□□□ 0.18
ERGIC3-217ENST00000488935 DCBLD1Q8N8Z6 715 aa16.17■□□□□ 0.18
ERGIC3-217ENST00000488935 ARHGEF2Q92974 986 aaKnown RBP16.17■□□□□ 0.18
ERGIC3-217ENST00000488935 PPP1R16AQ96I34 528 aa16.17■□□□□ 0.18
ERGIC3-217ENST00000488935 FEM1CQ96JP0 617 aa16.17■□□□□ 0.18
ERGIC3-217ENST00000488935 KLHL32Q96NJ5 620 aa16.17■□□□□ 0.18
ERGIC3-217ENST00000488935 KLF6Q99612 283 aaPredicted RBP16.17■□□□□ 0.18
ERGIC3-217ENST00000488935 NUP62CLQ9H1M0 184 aa16.17■□□□□ 0.18
ERGIC3-217ENST00000488935 IPO11Q9UI26 975 aaKnown RBP16.17■□□□□ 0.18
ERGIC3-217ENST00000488935 PNMA8BQ9ULN7 279 aaPredicted RBP16.17■□□□□ 0.18
ERGIC3-217ENST00000488935 PAXBP1Q9Y5B6 917 aa16.17■□□□□ 0.18
ERGIC3-217ENST00000488935 LRRK1Q38SD2 2015 aa16.16■□□□□ 0.18
ERGIC3-217ENST00000488935 CPED1A4D0V7 1026 aa16.16■□□□□ 0.18
ERGIC3-217ENST00000488935 PMS2P1A4D2B8 440 aa16.16■□□□□ 0.18
ERGIC3-217ENST00000488935 NEMP1O14524 444 aa16.16■□□□□ 0.18
ERGIC3-217ENST00000488935 SCAMP1O15126 338 aa16.16■□□□□ 0.18
ERGIC3-217ENST00000488935 LRIG2O94898 1065 aa16.16■□□□□ 0.18
ERGIC3-217ENST00000488935 LSM8O95777 96 aaKnown RBP16.16■□□□□ 0.18
ERGIC3-217ENST00000488935 CYP1A1P04798 512 aaPredicted RBP16.16■□□□□ 0.18
ERGIC3-217ENST00000488935 CDK4P11802 303 aa16.16■□□□□ 0.18
ERGIC3-217ENST00000488935 RPS21P63220 83 aaKnown RBP16.16■□□□□ 0.18
ERGIC3-217ENST00000488935 CDR2Q01850 454 aa16.16■□□□□ 0.18
ERGIC3-217ENST00000488935 ILKQ13418 452 aa16.16■□□□□ 0.18
ERGIC3-217ENST00000488935 PDE1CQ14123 709 aaPredicted RBP16.16■□□□□ 0.18
ERGIC3-217ENST00000488935 KRT31Q15323 416 aa16.16■□□□□ 0.18
ERGIC3-217ENST00000488935 HS1BP3Q53T59 392 aa16.16■□□□□ 0.18
ERGIC3-217ENST00000488935 MANEALQ5VSG8 457 aa16.16■□□□□ 0.18
ERGIC3-217ENST00000488935 NLRP14Q86W24 1093 aa16.16■□□□□ 0.18
ERGIC3-217ENST00000488935 LMX1AQ8TE12 382 aa16.16■□□□□ 0.18
ERGIC3-217ENST00000488935 RFFLQ8WZ73 363 aa16.16■□□□□ 0.18
ERGIC3-217ENST00000488935 FGF11Q92914 225 aa16.16■□□□□ 0.18
ERGIC3-217ENST00000488935 CEP44Q9C0F1 390 aa16.16■□□□□ 0.18
ERGIC3-217ENST00000488935 PRORYQ9H606 182 aa16.16■□□□□ 0.18
ERGIC3-217ENST00000488935 CHMP5Q9NZZ3 219 aa16.16■□□□□ 0.18
ERGIC3-217ENST00000488935 PPARGC1AQ9UBK2 798 aaKnown RBP16.16■□□□□ 0.18
ERGIC3-217ENST00000488935 NEU3Q9UQ49 428 aa16.16■□□□□ 0.18
ERGIC3-217ENST00000488935 HS3ST3A1Q9Y663 406 aa16.16■□□□□ 0.18
ERGIC3-217ENST00000488935 C2CD4BA6NLJ0 364 aa16.15■□□□□ 0.18
ERGIC3-217ENST00000488935 INSIG1O15503 277 aa16.15■□□□□ 0.18
ERGIC3-217ENST00000488935 MMP20O60882 483 aa16.15■□□□□ 0.18
ERGIC3-217ENST00000488935 USP12O75317 370 aa16.15■□□□□ 0.18
ERGIC3-217ENST00000488935 PLEKP08567 350 aaPredicted RBP16.15■□□□□ 0.18
ERGIC3-217ENST00000488935 CKMT1AP12532 417 aa16.15■□□□□ 0.18
ERGIC3-217ENST00000488935 TGM2P21980 687 aa16.15■□□□□ 0.18
ERGIC3-217ENST00000488935 MMP8P22894 467 aa16.15■□□□□ 0.18
ERGIC3-217ENST00000488935 SDC4P31431 198 aa16.15■□□□□ 0.18
ERGIC3-217ENST00000488935 RFC1P35251 1148 aaPredicted RBP16.15■□□□□ 0.18
ERGIC3-217ENST00000488935 HDAC4P56524 1084 aa16.15■□□□□ 0.18
ERGIC3-217ENST00000488935 E2F1Q01094 437 aa16.15■□□□□ 0.18
ERGIC3-217ENST00000488935 CCDC15Q0P6D6 951 aa16.15■□□□□ 0.18
ERGIC3-217ENST00000488935 PTP4A2Q12974 167 aa16.15■□□□□ 0.18
ERGIC3-217ENST00000488935 EIF2B5Q13144 721 aaKnown RBP16.15■□□□□ 0.18
ERGIC3-217ENST00000488935 SGCGQ13326 291 aa16.15■□□□□ 0.18
ERGIC3-217ENST00000488935 GUSBP11Q6P575 273 aa16.15■□□□□ 0.18
ERGIC3-217ENST00000488935 ZNF783Q6ZMS7 281 aa16.15■□□□□ 0.18
ERGIC3-217ENST00000488935 VPS36Q86VN1 386 aa16.15■□□□□ 0.18
ERGIC3-217ENST00000488935 ZNF548Q8NEK5 533 aaPredicted RBP16.15■□□□□ 0.18
ERGIC3-217ENST00000488935 IFI44Q8TCB0 444 aa16.15■□□□□ 0.18
ERGIC3-217ENST00000488935 FAM172AQ8WUF8 416 aa16.15■□□□□ 0.18
ERGIC3-217ENST00000488935 FCRL3Q96P31 734 aaPredicted RBP16.15■□□□□ 0.18
ERGIC3-217ENST00000488935 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.15■□□□□ 0.18
ERGIC3-217ENST00000488935 NOL6Q9H6R4 1146 aaKnown RBP16.15■□□□□ 0.18
ERGIC3-217ENST00000488935 MBNL1Q9NR56 388 aaKnown RBP16.15■□□□□ 0.18
ERGIC3-217ENST00000488935 NLGN3Q9NZ94 848 aa16.15■□□□□ 0.18
ERGIC3-217ENST00000488935 COQ6Q9Y2Z9 468 aa16.15■□□□□ 0.18
ERGIC3-217ENST00000488935 SPTY2D1-AS1A0A0U1RR47 76 aa16.14■□□□□ 0.17
ERGIC3-217ENST00000488935 A0A1W2PNU3 283 aaPredicted RBP16.14■□□□□ 0.17
ERGIC3-217ENST00000488935 RRP8O43159 456 aaKnown RBP16.14■□□□□ 0.17
ERGIC3-217ENST00000488935 BUB1O43683 1085 aa16.14■□□□□ 0.17
ERGIC3-217ENST00000488935 CSO75390 466 aaKnown RBP16.14■□□□□ 0.17
ERGIC3-217ENST00000488935 GCATO75600 419 aa16.14■□□□□ 0.17
ERGIC3-217ENST00000488935 CSF2P04141 144 aa16.14■□□□□ 0.17
ERGIC3-217ENST00000488935 CELA2BP08218 269 aaPredicted RBP16.14■□□□□ 0.17
ERGIC3-217ENST00000488935 RHOQP17081 205 aa16.14■□□□□ 0.17
ERGIC3-217ENST00000488935 JUNDP17535 347 aa16.14■□□□□ 0.17
ERGIC3-217ENST00000488935 SOX5P35711 763 aa16.14■□□□□ 0.17
ERGIC3-217ENST00000488935 JAM2P57087 298 aa16.14■□□□□ 0.17
ERGIC3-217ENST00000488935 SLC20A2Q08357 652 aa16.14■□□□□ 0.17
ERGIC3-217ENST00000488935 MYLK3Q32MK0 819 aa16.14■□□□□ 0.17
ERGIC3-217ENST00000488935 TBC1D25Q3MII6 688 aa16.14■□□□□ 0.17
ERGIC3-217ENST00000488935 CDCP2Q5VXM1 449 aa16.14■□□□□ 0.17
ERGIC3-217ENST00000488935 KIAA1161Q6NSJ0 714 aa16.14■□□□□ 0.17
ERGIC3-217ENST00000488935 SCYL2Q6P3W7 929 aa16.14■□□□□ 0.17
ERGIC3-217ENST00000488935 WDR59Q6PJI9 974 aa16.14■□□□□ 0.17
ERGIC3-217ENST00000488935 KYAT3Q6YP21 454 aaKnown RBP16.14■□□□□ 0.17
ERGIC3-217ENST00000488935 SPACA3Q8IXA5 215 aa16.14■□□□□ 0.17
ERGIC3-217ENST00000488935 MSANTD4Q8NCY6 345 aa16.14■□□□□ 0.17
ERGIC3-217ENST00000488935 MAPK15Q8TD08 544 aa16.14■□□□□ 0.17
ERGIC3-217ENST00000488935 TBC1D31Q96DN5 1066 aa16.14■□□□□ 0.17
ERGIC3-217ENST00000488935 EXOC2Q96KP1 924 aa16.14■□□□□ 0.17
ERGIC3-217ENST00000488935 WRAP53Q9BUR4 548 aaKnown RBP16.14■□□□□ 0.17
ERGIC3-217ENST00000488935 C1QTNF2Q9BXJ5 285 aa16.14■□□□□ 0.17
ERGIC3-217ENST00000488935 GPR27Q9NS67 375 aa16.14■□□□□ 0.17
ERGIC3-217ENST00000488935 SEPT11Q9NVA2 429 aaKnown RBP16.14■□□□□ 0.17
ERGIC3-217ENST00000488935 TMEM248Q9NWD8 314 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms