RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 IGHV4-34P06331 123 aa16.25■□□□□ 0.19
ERGIC3-216ENST00000488384 ITGB7P26010 798 aa16.25■□□□□ 0.19
ERGIC3-216ENST00000488384 LMNB2Q03252 620 aa16.25■□□□□ 0.19
ERGIC3-216ENST00000488384 PAFAH1B3Q15102 231 aaKnown RBP16.25■□□□□ 0.19
ERGIC3-216ENST00000488384 WDR45BQ5MNZ6 344 aa16.25■□□□□ 0.19
ERGIC3-216ENST00000488384 SYCP2LQ5T4T6 812 aa16.25■□□□□ 0.19
ERGIC3-216ENST00000488384 KIAA0895LQ68EN5 471 aa16.25■□□□□ 0.19
ERGIC3-216ENST00000488384 VSIG1Q86XK7 387 aa16.25■□□□□ 0.19
ERGIC3-216ENST00000488384 RGL4Q8IZJ4 473 aa16.25■□□□□ 0.19
ERGIC3-216ENST00000488384 ATPAF2Q8N5M1 289 aa16.25■□□□□ 0.19
ERGIC3-216ENST00000488384 OR2T34Q8NGX1 318 aa16.25■□□□□ 0.19
ERGIC3-216ENST00000488384 OR14C36Q8NHC7 312 aa16.25■□□□□ 0.19
ERGIC3-216ENST00000488384 BIRC7Q96CA5 298 aa16.25■□□□□ 0.19
ERGIC3-216ENST00000488384 RXFP3Q9NSD7 469 aa16.25■□□□□ 0.19
ERGIC3-216ENST00000488384 EVLQ9UI08 416 aaPredicted RBP16.25■□□□□ 0.19
ERGIC3-216ENST00000488384 SLCO1B1Q9Y6L6 691 aa16.25■□□□□ 0.19
ERGIC3-216ENST00000488384 PCDH15Q96QU1 1955 aa16.25■□□□□ 0.19
ERGIC3-216ENST00000488384 LNP1A1A4G5 178 aa16.24■□□□□ 0.19
ERGIC3-216ENST00000488384 LRRC72A6NJI9 287 aa16.24■□□□□ 0.19
ERGIC3-216ENST00000488384 KRIT1O00522 736 aa16.24■□□□□ 0.19
ERGIC3-216ENST00000488384 FOXD2O60548 495 aaPredicted RBP16.24■□□□□ 0.19
ERGIC3-216ENST00000488384 MAFKO60675 156 aa16.24■□□□□ 0.19
ERGIC3-216ENST00000488384 FSBPO95073 299 aa16.24■□□□□ 0.19
ERGIC3-216ENST00000488384 PEX11BO96011 259 aa16.24■□□□□ 0.19
ERGIC3-216ENST00000488384 UGT2B4P06133 528 aa16.24■□□□□ 0.19
ERGIC3-216ENST00000488384 TNNT1P13805 278 aa16.24■□□□□ 0.19
ERGIC3-216ENST00000488384 RGRP47804 291 aa16.24■□□□□ 0.19
ERGIC3-216ENST00000488384 MARCKSL1P49006 195 aa16.24■□□□□ 0.19
ERGIC3-216ENST00000488384 TAS2R38P59533 333 aa16.24■□□□□ 0.19
ERGIC3-216ENST00000488384 PPP2CBP62714 309 aa16.24■□□□□ 0.19
ERGIC3-216ENST00000488384 PPP2CAP67775 309 aa16.24■□□□□ 0.19
ERGIC3-216ENST00000488384 GALNT2Q10471 571 aa16.24■□□□□ 0.19
ERGIC3-216ENST00000488384 RSPO4Q2I0M5 234 aaPredicted RBP16.24■□□□□ 0.19
ERGIC3-216ENST00000488384 MYLK3Q32MK0 819 aa16.24■□□□□ 0.19
ERGIC3-216ENST00000488384 TRIM61Q5EBN2 209 aa16.24■□□□□ 0.19
ERGIC3-216ENST00000488384 TMCO4Q5TGY1 634 aa16.24■□□□□ 0.19
ERGIC3-216ENST00000488384 ERN2Q76MJ5 926 aaKnown RBP16.24■□□□□ 0.19
ERGIC3-216ENST00000488384 PARS2Q7L3T8 475 aaKnown RBP16.24■□□□□ 0.19
ERGIC3-216ENST00000488384 KIAA1328Q86T90 577 aa16.24■□□□□ 0.19
ERGIC3-216ENST00000488384 ZCCHC9Q8N567 271 aaKnown RBP16.24■□□□□ 0.19
ERGIC3-216ENST00000488384 C1orf216Q8TAB5 229 aa16.24■□□□□ 0.19
ERGIC3-216ENST00000488384 SNX19Q92543 992 aa16.24■□□□□ 0.19
ERGIC3-216ENST00000488384 PPP1R16AQ96I34 528 aa16.24■□□□□ 0.19
ERGIC3-216ENST00000488384 LRIG1Q96JA1 1093 aa16.24■□□□□ 0.19
ERGIC3-216ENST00000488384 ZNF599Q96NL3 588 aa16.24■□□□□ 0.19
ERGIC3-216ENST00000488384 RNF157Q96PX1 679 aa16.24■□□□□ 0.19
ERGIC3-216ENST00000488384 ORAI3Q9BRQ5 295 aa16.24■□□□□ 0.19
ERGIC3-216ENST00000488384 HDAC8Q9BY41 377 aa16.24■□□□□ 0.19
ERGIC3-216ENST00000488384 DYRK4Q9NR20 520 aa16.24■□□□□ 0.19
ERGIC3-216ENST00000488384 EIF2B4Q9UI10 523 aaKnown RBP16.24■□□□□ 0.19
ERGIC3-216ENST00000488384 NCOR2Q9Y618 2525 aa16.24■□□□□ 0.19
ERGIC3-216ENST00000488384 GOLGA6L3A6NEY3 463 aa16.23■□□□□ 0.19
ERGIC3-216ENST00000488384 MUSKO15146 869 aa16.23■□□□□ 0.19
ERGIC3-216ENST00000488384 INSIG1O15503 277 aa16.23■□□□□ 0.19
ERGIC3-216ENST00000488384 PALMO75781 387 aa16.23■□□□□ 0.19
ERGIC3-216ENST00000488384 MAP3K6O95382 1288 aa16.23■□□□□ 0.19
ERGIC3-216ENST00000488384 POP4O95707 220 aaKnown RBP16.23■□□□□ 0.19
ERGIC3-216ENST00000488384 PI4KAP42356 2102 aa16.23■□□□□ 0.19
ERGIC3-216ENST00000488384 FOXK2Q01167 660 aa16.23■□□□□ 0.19
ERGIC3-216ENST00000488384 GBE1Q04446 702 aa16.23■□□□□ 0.19
ERGIC3-216ENST00000488384 SLC10A7Q0GE19 358 aa16.23■□□□□ 0.19
ERGIC3-216ENST00000488384 RFTN1Q14699 578 aaPredicted RBP16.23■□□□□ 0.19
ERGIC3-216ENST00000488384 AASDHQ4L235 1098 aaPredicted RBP16.23■□□□□ 0.19
ERGIC3-216ENST00000488384 SLC23A3Q6PIS1 610 aa16.23■□□□□ 0.19
ERGIC3-216ENST00000488384 DAAM2Q86T65 1068 aa16.23■□□□□ 0.19
ERGIC3-216ENST00000488384 PLD5Q8N7P1 536 aa16.23■□□□□ 0.19
ERGIC3-216ENST00000488384 C12orf50Q8NA57 414 aaPredicted RBP16.23■□□□□ 0.19
ERGIC3-216ENST00000488384 TSEN2Q8NCE0 465 aaKnown RBP16.23■□□□□ 0.19
ERGIC3-216ENST00000488384 CALR3Q96L12 384 aaKnown RBP16.23■□□□□ 0.19
ERGIC3-216ENST00000488384 OSBPL1AQ9BXW6 950 aa16.23■□□□□ 0.19
ERGIC3-216ENST00000488384 MIR1-1HGQ9H1L0 117 aa16.23■□□□□ 0.19
ERGIC3-216ENST00000488384 KDM4CQ9H3R0 1056 aa16.23■□□□□ 0.19
ERGIC3-216ENST00000488384 CAPN10Q9HC96 672 aa16.23■□□□□ 0.19
ERGIC3-216ENST00000488384 DDX56Q9NY93 547 aaKnown RBP16.23■□□□□ 0.19
ERGIC3-216ENST00000488384 TRIM10Q9UDY6 481 aa16.23■□□□□ 0.19
ERGIC3-216ENST00000488384 SUSD2Q9UGT4 822 aa16.23■□□□□ 0.19
ERGIC3-216ENST00000488384 PLXNA2O75051 1894 aa16.22■□□□□ 0.19
ERGIC3-216ENST00000488384 SHROOM3Q8TF72 1996 aa16.22■□□□□ 0.19
ERGIC3-216ENST00000488384 CACNA1EQ15878 2313 aa16.22■□□□□ 0.19
ERGIC3-216ENST00000488384 KHNYNO15037 678 aaKnown RBP16.22■□□□□ 0.19
ERGIC3-216ENST00000488384 GDF9O60383 454 aa16.22■□□□□ 0.19
ERGIC3-216ENST00000488384 CFIP05156 583 aa16.22■□□□□ 0.19
ERGIC3-216ENST00000488384 ADRB3P13945 408 aa16.22■□□□□ 0.19
ERGIC3-216ENST00000488384 GARSP41250 739 aaKnown RBP16.22■□□□□ 0.19
ERGIC3-216ENST00000488384 CCR5P51681 352 aa16.22■□□□□ 0.19
ERGIC3-216ENST00000488384 NEK3P51956 506 aa16.22■□□□□ 0.19
ERGIC3-216ENST00000488384 IRX4P78413 519 aa16.22■□□□□ 0.19
ERGIC3-216ENST00000488384 PUM1Q14671 1186 aaKnown RBP eCLIP16.22■□□□□ 0.19
ERGIC3-216ENST00000488384 LBRQ14739 615 aaKnown RBP16.22■□□□□ 0.19
ERGIC3-216ENST00000488384 TAZQ16635 292 aa16.22■□□□□ 0.19
ERGIC3-216ENST00000488384 DUOXA1Q1HG43 343 aa16.22■□□□□ 0.19
ERGIC3-216ENST00000488384 ZNF805Q5CZA5 627 aa16.22■□□□□ 0.19
ERGIC3-216ENST00000488384 SLC9A4Q6AI14 798 aa16.22■□□□□ 0.19
ERGIC3-216ENST00000488384 MFSD7Q6UXD7 560 aa16.22■□□□□ 0.19
ERGIC3-216ENST00000488384 RABEPKQ7Z6M1 372 aa16.22■□□□□ 0.19
ERGIC3-216ENST00000488384 LRRC57Q8N9N7 239 aa16.22■□□□□ 0.19
ERGIC3-216ENST00000488384 CEP76Q8TAP6 659 aa16.22■□□□□ 0.19
ERGIC3-216ENST00000488384 KRT35Q92764 455 aa16.22■□□□□ 0.19
ERGIC3-216ENST00000488384 RNF25Q96BH1 459 aaPredicted RBP16.22■□□□□ 0.19
ERGIC3-216ENST00000488384 PSKH2Q96QS6 385 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms