RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-242	ENST00000488013	OR2AP1	Q8NGE2	309 aa		11.2	□□□□□ -0.62
HDLBP-242	ENST00000488013	TTC8	Q8TAM2	541 aa		11.2	□□□□□ -0.62
HDLBP-242	ENST00000488013	HCAR2	Q8TDS4	363 aa		11.2	□□□□□ -0.62
HDLBP-242	ENST00000488013	IMP4	Q96G21	291 aa	Known RBP	11.2	□□□□□ -0.62
HDLBP-242	ENST00000488013	ZNF641	Q96N77	438 aa	Predicted RBP	11.2	□□□□□ -0.62
HDLBP-242	ENST00000488013	SEMA3C	Q99985	751 aa		11.2	□□□□□ -0.62
HDLBP-242	ENST00000488013	OSBPL1A	Q9BXW6	950 aa		11.2	□□□□□ -0.62
HDLBP-242	ENST00000488013	CPEB1	Q9BZB8	566 aa	Known RBP	11.2	□□□□□ -0.62
HDLBP-242	ENST00000488013	PHACTR1	Q9C0D0	580 aa		11.2	□□□□□ -0.62
HDLBP-242	ENST00000488013	C10orf88	Q9H8K7	445 aa		11.2	□□□□□ -0.62
HDLBP-242	ENST00000488013	XAB2	Q9HCS7	855 aa	Known RBP	11.2	□□□□□ -0.62
HDLBP-242	ENST00000488013	GDF3	Q9NR23	364 aa		11.2	□□□□□ -0.62
HDLBP-242	ENST00000488013	ARHGEF3	Q9NR81	526 aa		11.2	□□□□□ -0.62
HDLBP-242	ENST00000488013	THAP10	Q9P2Z0	257 aa	Predicted RBP	11.2	□□□□□ -0.62
HDLBP-242	ENST00000488013	MTRF1L	Q9UGC7	380 aa	Known RBP	11.2	□□□□□ -0.62
HDLBP-242	ENST00000488013	RPL26L1	Q9UNX3	145 aa	Known RBP	11.2	□□□□□ -0.62
HDLBP-242	ENST00000488013	NUP210	Q8TEM1	1887 aa	Predicted RBP	11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	DNALI1	O14645	258 aa	Predicted RBP	11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	SYNCRIP	O60506	623 aa	Known RBP	11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	ATG13	O75143	517 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	SOCS5	O75159	536 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	SUN1	O94901	812 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	AP2A1	O95782	977 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	MT-CO1	P00395	513 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	HLA-DQB2	P05538	268 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	APRT	P07741	180 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	RHOXF2B	P0C7M4	288 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	ZSCAN5DP	P0CG00	497 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	MLN	P12872	115 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	CR2	P20023	1033 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	TNFRSF8	P28908	595 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	SCNN1B	P51168	640 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	STARD6	P59095	220 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	SFSWAP	Q12872	951 aa	Known RBP	11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	LAMB3	Q13751	1172 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	ENPP2	Q13822	863 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	ELAVL3	Q14576	367 aa	Known RBP	11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	STARD3	Q14849	445 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	TRIP13	Q15645	432 aa	Predicted RBP	11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	PTPRN	Q16849	979 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	MYLK3	Q32MK0	819 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	TJAP1	Q5JTD0	557 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	TMEM215	Q68D42	235 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	WDR93	Q6P2C0	686 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	TPRG1	Q6ZUI0	275 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	CHPF	Q8IZ52	775 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	TSEN2	Q8NCE0	465 aa	Known RBP	11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	USP33	Q8TEY7	942 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	CHFR	Q96EP1	664 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	MRGPRX3	Q96LB0	322 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	RHOXF2	Q9BQY4	288 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	FSD1L	Q9BXM9	530 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	ADGRE3	Q9BY15	652 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	OSBPL6	Q9BZF3	934 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	TMEM245	Q9H330	911 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	ATP13A3	Q9H7F0	1226 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	ETNK1	Q9HBU6	452 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	EPB41L5	Q9HCM4	733 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	ANAPC5	Q9UJX4	755 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	FCF1	Q9Y324	198 aa	Known RBP	11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	C2orf16	Q68DN1	1984 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	OBSL1	O75147	1896 aa		11.19	□□□□□ -0.62
HDLBP-242	ENST00000488013	DOCK6	Q96HP0	2047 aa		11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	DENND4C	Q5VZ89	1909 aa		11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	WASH3P	C4AMC7	463 aa		11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	TRIM24	O15164	1050 aa		11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	CTIF	O43310	598 aa	Known RBP	11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	NARS	O43776	548 aa	Known RBP	11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	RNASEH1	O60930	286 aa	Known RBP	11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	METTL18	O95568	372 aa		11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	PRNP	P04156	253 aa		11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	NFKB1	P19838	968 aa		11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	IVD	P26440	423 aa		11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	PSMB4	P28070	264 aa		11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	SERPINA4	P29622	427 aa		11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	CD68	P34810	354 aa	Predicted RBP	11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	CTSO	P43234	321 aa	Predicted RBP	11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	SOX9	P48436	509 aa		11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	VPS41	P49754	854 aa		11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	SUOX	P51687	545 aa		11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	POLR2L	P62875	67 aa	Known RBP	11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	SLC7A5	Q01650	507 aa		11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	BCL2L1	Q07817	233 aa		11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	ZNF234	Q14588	700 aa		11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	PON2	Q15165	354 aa		11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	MAP9	Q49MG5	647 aa		11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	EOGT	Q5NDL2	527 aa		11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	RNASEH2B	Q5TBB1	312 aa	Known RBP	11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	FAM46C	Q5VWP2	391 aa		11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	IZUMO3	Q5VZ72	239 aa		11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	B4GALNT4	Q76KP1	1039 aa		11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	SRL	Q86TD4	932 aa		11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	PDIK1L	Q8N165	341 aa		11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	RYBP	Q8N488	228 aa	Predicted RBP	11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	ZNF513	Q8N8E2	541 aa	Predicted RBP	11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	ARRDC2	Q8TBH0	407 aa		11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	FRS2	Q8WU20	508 aa		11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	CYB5D2	Q8WUJ1	264 aa		11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	OR8D1	Q8WZ84	308 aa		11.18	□□□□□ -0.62
HDLBP-242	ENST00000488013	TADA1	Q96BN2	335 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms