RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 GH1P01241 217 aa5.2□□□□□ -1.58
BRCA1-217ENST00000487825 WEE2P0C1S8 567 aa5.2□□□□□ -1.58
BRCA1-217ENST00000487825 ZNF286BP0CG31 522 aa5.2□□□□□ -1.58
BRCA1-217ENST00000487825 SFPQP23246 707 aaKnown RBP eCLIP5.2□□□□□ -1.58
BRCA1-217ENST00000487825 PRKAR1BP31321 381 aa5.2□□□□□ -1.58
BRCA1-217ENST00000487825 STAT2P52630 851 aa5.2□□□□□ -1.58
BRCA1-217ENST00000487825 PSG6Q00889 435 aa5.2□□□□□ -1.58
BRCA1-217ENST00000487825 BAATQ14032 418 aaPredicted RBP5.2□□□□□ -1.58
BRCA1-217ENST00000487825 CCNIQ14094 377 aa5.2□□□□□ -1.58
BRCA1-217ENST00000487825 CNN3Q15417 329 aaKnown RBP5.2□□□□□ -1.58
BRCA1-217ENST00000487825 CCDC158Q5M9N0 1113 aa5.2□□□□□ -1.58
BRCA1-217ENST00000487825 CERCAMQ5T4B2 595 aa5.2□□□□□ -1.58
BRCA1-217ENST00000487825 C12orf60Q5U649 245 aa5.2□□□□□ -1.58
BRCA1-217ENST00000487825 CACHD1Q5VU97 1274 aa5.2□□□□□ -1.58
BRCA1-217ENST00000487825 PLPP4Q5VZY2 271 aa5.2□□□□□ -1.58
BRCA1-217ENST00000487825 IL31Q6EBC2 164 aa5.2□□□□□ -1.58
BRCA1-217ENST00000487825 CXorf57Q6NSI4 855 aaKnown RBP5.2□□□□□ -1.58
BRCA1-217ENST00000487825 MTHFD1LQ6UB35 978 aa5.2□□□□□ -1.58
BRCA1-217ENST00000487825 CHPFQ8IZ52 775 aa5.2□□□□□ -1.58
BRCA1-217ENST00000487825 ZNF366Q8N895 744 aa5.2□□□□□ -1.58
BRCA1-217ENST00000487825 DENND1AQ8TEH3 1009 aa5.2□□□□□ -1.58
BRCA1-217ENST00000487825 SNX18Q96RF0 628 aa5.2□□□□□ -1.58
BRCA1-217ENST00000487825 MMS19Q96T76 1030 aa5.2□□□□□ -1.58
BRCA1-217ENST00000487825 PCGF6Q9BYE7 350 aa5.2□□□□□ -1.58
BRCA1-217ENST00000487825 C22orf23Q9BZE7 217 aa5.2□□□□□ -1.58
BRCA1-217ENST00000487825 RXFP3Q9NSD7 469 aa5.2□□□□□ -1.58
BRCA1-217ENST00000487825 IGSF9Q9P2J2 1179 aa5.2□□□□□ -1.58
BRCA1-217ENST00000487825 KLHL13Q9P2N7 655 aa5.2□□□□□ -1.58
BRCA1-217ENST00000487825 AMFRQ9UKV5 643 aa5.2□□□□□ -1.58
BRCA1-217ENST00000487825 DRG1Q9Y295 367 aaKnown RBP5.2□□□□□ -1.58
BRCA1-217ENST00000487825 WDR81Q562E7 1941 aa5.2□□□□□ -1.58
BRCA1-217ENST00000487825 TEP1Q99973 2627 aaKnown RBP5.2□□□□□ -1.58
BRCA1-217ENST00000487825 EML5Q05BV3 1969 aa5.2□□□□□ -1.58
BRCA1-217ENST00000487825 CYP2D7A0A087X1C5 515 aa5.19□□□□□ -1.58
BRCA1-217ENST00000487825 HIDE1A8MVS5 230 aa5.19□□□□□ -1.58
BRCA1-217ENST00000487825 H7C4K7 107 aa5.19□□□□□ -1.58
BRCA1-217ENST00000487825 RASSF9O75901 435 aa5.19□□□□□ -1.58
BRCA1-217ENST00000487825 SCGB1D2O95969 90 aa5.19□□□□□ -1.58
BRCA1-217ENST00000487825 RETP07949 1114 aa5.19□□□□□ -1.58
BRCA1-217ENST00000487825 CYP2A6P11509 494 aaPredicted RBP5.19□□□□□ -1.58
BRCA1-217ENST00000487825 BRAFP15056 766 aa5.19□□□□□ -1.58
BRCA1-217ENST00000487825 ITGA8P53708 1063 aa5.19□□□□□ -1.58
BRCA1-217ENST00000487825 CSTF1Q05048 431 aaKnown RBP5.19□□□□□ -1.58
BRCA1-217ENST00000487825 MTX1Q13505 466 aa5.19□□□□□ -1.58
BRCA1-217ENST00000487825 PLEKHG6Q3KR16 790 aa5.19□□□□□ -1.58
BRCA1-217ENST00000487825 ARHGAP29Q52LW3 1261 aa5.19□□□□□ -1.58
BRCA1-217ENST00000487825 C3orf38Q5JPI3 329 aa5.19□□□□□ -1.58
BRCA1-217ENST00000487825 RARS2Q5T160 578 aaKnown RBP5.19□□□□□ -1.58
BRCA1-217ENST00000487825 APOA5Q6Q788 366 aa5.19□□□□□ -1.58
BRCA1-217ENST00000487825 FAM160B2Q86V87 743 aa5.19□□□□□ -1.58
BRCA1-217ENST00000487825 KIAA0319LQ8IZA0 1049 aa5.19□□□□□ -1.58
BRCA1-217ENST00000487825 GALNT16Q8N428 558 aa5.19□□□□□ -1.58
BRCA1-217ENST00000487825 GMCL1P1Q8NEA9 526 aa5.19□□□□□ -1.58
BRCA1-217ENST00000487825 PPTC7Q8NI37 304 aa5.19□□□□□ -1.58
BRCA1-217ENST00000487825 ATP6V0A1Q93050 837 aa5.19□□□□□ -1.58
BRCA1-217ENST00000487825 SPSB4Q96A44 273 aa5.19□□□□□ -1.58
BRCA1-217ENST00000487825 ZBTB45Q96K62 511 aaPredicted RBP5.19□□□□□ -1.58
BRCA1-217ENST00000487825 PPP1R9BQ96SB3 815 aa5.19□□□□□ -1.58
BRCA1-217ENST00000487825 MPHOSPH6Q99547 160 aaKnown RBP5.19□□□□□ -1.58
BRCA1-217ENST00000487825 HNRNPABQ99729 332 aaKnown RBP5.19□□□□□ -1.58
BRCA1-217ENST00000487825 TPCN1Q9ULQ1 816 aa5.19□□□□□ -1.58
BRCA1-217ENST00000487825 USP22Q9UPT9 525 aa5.19□□□□□ -1.58
BRCA1-217ENST00000487825 LZTS1Q9Y250 596 aa5.19□□□□□ -1.58
BRCA1-217ENST00000487825 CDY1Q9Y6F8 540 aa5.19□□□□□ -1.58
BRCA1-217ENST00000487825 PDCD11Q14690 1871 aaKnown RBP5.19□□□□□ -1.58
BRCA1-217ENST00000487825 DOCK6Q96HP0 2047 aa5.19□□□□□ -1.58
BRCA1-217ENST00000487825 CFAP46Q8IYW2 2715 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 SPTA1P02549 2419 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 PTPN13Q12923 2485 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 NUP205Q92621 2012 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 ZNF462Q96JM2 2506 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 IGKV6D-41A0A0C4DH26 115 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 TCRBV5S1A1TA0A578 114 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 C17orf102A2RUQ5 167 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 FAM227AF5H4B4 570 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 PYCARD-AS1I3L0S3 204 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 PLA2G6O60733 806 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 PMPCBO75439 489 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 KCNK5O95279 499 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 FGAP02671 866 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 ICAM1P05362 532 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 GHRP10912 638 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 MYCLP12524 364 aaPredicted RBP5.18□□□□□ -1.58
BRCA1-217ENST00000487825 GKP32189 559 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 PTGER1P34995 402 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 MAGEA9P43362 315 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 MMP13P45452 471 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 BCAT1P54687 386 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 STARD6P59095 220 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 CCDC6Q16204 474 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 MINDY4Q4G0A6 757 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 FAM102BQ5T8I3 360 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 CCDC149Q6ZUS6 474 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 CHST3Q7LGC8 479 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 BCDIN3DQ7Z5W3 292 aaKnown RBP5.18□□□□□ -1.58
BRCA1-217ENST00000487825 MICU3Q86XE3 530 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 WDR63Q8IWG1 891 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 CHURC1Q8WUH1 139 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 MRPS27Q92552 414 aaKnown RBP5.18□□□□□ -1.58
BRCA1-217ENST00000487825 RSPRY1Q96DX4 576 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms